MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP091556 Location: 882784..894109 Organism: Salmonella enterica strain 632 Replicon: chromosome
Accession: NZ_CP091556 Location: 882784..894109 Organism: Salmonella enterica strain 632 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INN80_RS04275 (878230) | 878230..879328 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| INN80_RS04280 (879338) | 879338..880855 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| INN80_RS04285 (880931) | 880931..881476 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| INN80_RS04290 (881741) | 881741..882499 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| INN80_RS04300 (882784) | 882784..883590 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| INN80_RS04305 (883865) | 883865..884116 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| INN80_RS04310 (884293) | 884293..884520 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| INN80_RS04315 (884520) | 884520..884918 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| INN80_RS04320 (885724) | 885724..886260 | + | 537 | WP_001038506.1 | Attachment invasion locus protein | VF |
| INN80_RS04325 (886307) | 886307..886939 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| INN80_RS04330 (887658) | 887658..888242 | + | 585 | WP_001244638.1 | putative fimbrial-like protein YbgD | VF |
| INN80_RS04335 (888362) | 888362..890851 | + | 2490 | WP_000705483.1 | Outer membrane usher protein PapC | VF |
| INN80_RS04340 (890892) | 890892..891635 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| INN80_RS04345 (891632) | 891632..892708 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| INN80_RS04350 (892852) | 892852..893364 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| INN80_RS04355 (893351) | 893351..894109 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| INN80_RS04360 (894319) | 894319..895173 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| INN80_RS04365 (895295) | 895295..895567 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| INN80_RS04370 (895598) | 895598..896827 | - | 1230 | WP_000036825.1 | amino acid permease | - |
| INN80_RS04375 (896969) | 896969..897424 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| INN80_RS04380 (897528) | 897528..898391 | + | 864 | WP_001270766.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0 |