MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP090545 Location: 3815778..3829751 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Accession: NZ_CP090545 Location: 3815778..3829751 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F57_RS18990 () | 3811349..3813793 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| L0F57_RS18995 () | 3813902..3814669 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| L0F57_RS19000 () | 3815040..3815447 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| L0F57_RS19005 () | 3815778..3816497 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| L0F57_RS19010 () | 3816501..3816716 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| L0F57_RS19015 () | 3816833..3817780 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| L0F57_RS19020 () | 3818272..3818512 | - | 241 | Protein_3728 | PerC family transcriptional regulator | - |
| L0F57_RS19025 () | 3818595..3819416 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| L0F57_RS19030 () | 3819822..3820292 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| L0F57_RS19035 () | 3820314..3822824 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| L0F57_RS19040 () | 3822848..3823585 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| L0F57_RS19045 () | 3823669..3824181 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| L0F57_RS19050 () | 3824931..3825635 | - | 705 | Protein_3734 | integrase core domain-containing protein | - |
| L0F57_RS19055 () | 3825688..3825936 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| L0F57_RS19060 () | 3826038..3826346 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| L0F57_RS19065 () | 3826429..3826545 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3826630..3827052 | - | 423 | - | - | Antitoxin Detail |
| L0F57_RS19070 () | 3826787..3827062 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| L0F57_RS19075 () | 3827115..3827552 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| L0F57_RS19080 () | 3828115..3828561 | - | 447 | WP_000935097.1 | protein SciX | - |
| L0F57_RS19085 () | 3828555..3829424 | - | 870 | Protein_3741 | Protein RhsC | VF |
| L0F57_RS19090 () | 3829488..3829751 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| L0F57_RS19095 () | 3829745..3833839 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| L0F57_RS19100 () | 3833858..3834304 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |