MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP090535 Location: 3712319..3726292 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Accession: NZ_CP090535 Location: 3712319..3726292 Organism: Salmonella enterica strain 2016089-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F58_RS18315 () | 3707890..3710334 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| L0F58_RS18320 () | 3710443..3711210 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| L0F58_RS18325 () | 3711581..3711988 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| L0F58_RS18330 () | 3712319..3713038 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| L0F58_RS18335 () | 3713042..3713257 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| L0F58_RS18340 () | 3713374..3714321 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| L0F58_RS18345 () | 3714813..3715053 | - | 241 | Protein_3593 | PerC family transcriptional regulator | - |
| L0F58_RS18350 () | 3715136..3715957 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| L0F58_RS18355 () | 3716363..3716833 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| L0F58_RS18360 () | 3716855..3719365 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| L0F58_RS18365 () | 3719389..3720126 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| L0F58_RS18370 () | 3720210..3720722 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| L0F58_RS18375 () | 3721472..3722176 | - | 705 | Protein_3599 | integrase core domain-containing protein | - |
| L0F58_RS18380 () | 3722229..3722477 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| L0F58_RS18385 () | 3722579..3722887 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| L0F58_RS18390 () | 3722970..3723086 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3723171..3723593 | - | 423 | - | - | Antitoxin Detail |
| L0F58_RS18395 () | 3723328..3723603 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| L0F58_RS18400 () | 3723656..3724093 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| L0F58_RS18405 () | 3724656..3725102 | - | 447 | WP_000935097.1 | protein SciX | - |
| L0F58_RS18410 () | 3725096..3725965 | - | 870 | Protein_3606 | Protein RhsC | VF |
| L0F58_RS18415 () | 3726029..3726292 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| L0F58_RS18420 () | 3726286..3730380 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| L0F58_RS18425 () | 3730399..3730845 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |