MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP090533 Location: 992160..1006448 Organism: Salmonella enterica strain 2017005-SE Replicon: chromosome
Accession: NZ_CP090533 Location: 992160..1006448 Organism: Salmonella enterica strain 2017005-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F61_RS04670 () | 987184..987630 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| L0F61_RS04675 () | 987649..991743 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| L0F61_RS04680 () | 991737..992000 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| L0F61_RS04685 () | 992064..992933 | + | 870 | Protein_909 | Protein RhsC | VF |
| L0F61_RS04690 () | 992927..993373 | + | 447 | WP_000935097.1 | protein SciX | - |
| L0F61_RS04695 () | 993936..994373 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| L0F61_RS04700 () | 994426..994701 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 994436..994858 | + | 423 | - | - | Antitoxin Detail |
| L0F61_RS04705 () | 994943..995059 | + | 117 | WP_227457392.1 | hypothetical protein | - |
| L0F61_RS04710 () | 995142..995450 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| L0F61_RS04715 () | 995552..995800 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| L0F61_RS04720 () | 995853..996557 | + | 705 | Protein_916 | integrase core domain-containing protein | - |
| L0F61_RS04725 () | 997307..997819 | + | 513 | WP_077248260.1 | pilus assembly protein | - |
| L0F61_RS04730 () | 997903..998640 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| L0F61_RS04735 () | 998664..1001174 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| L0F61_RS04740 () | 1001196..1001666 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| L0F61_RS04745 () | 1002072..1002893 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| L0F61_RS04750 () | 1002976..1003216 | + | 241 | Protein_922 | PerC family transcriptional regulator | - |
| L0F61_RS04755 () | 1003708..1004655 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| L0F61_RS04760 () | 1004772..1004987 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| L0F61_RS04765 () | 1004991..1005710 | - | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| L0F61_RS04770 () | 1006041..1006448 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| L0F61_RS04775 () | 1006819..1007586 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| L0F61_RS04780 () | 1007695..1010139 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| L0F61_RS04785 () | 1010379..1010957 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |