MGE detailed information
MGE type: Prophage MGE length: 11549 bp
Accession: NZ_CP090533 Location: 4467777..4479325 Organism: Salmonella enterica strain 2017005-SE Replicon: chromosome
Accession: NZ_CP090533 Location: 4467777..4479325 Organism: Salmonella enterica strain 2017005-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F61_RS22100 (4463433) | 4463433..4464404 | + | 972 | WP_001038948.1 | DMT family transporter | - |
| L0F61_RS22105 (4464401) | 4464401..4465435 | + | 1035 | WP_000675710.1 | phosphotriesterase | - |
| L0F61_RS22110 (4465480) | 4465480..4467222 | - | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| L0F61_RS22115 (4467348) | 4467348..4467764 | + | 417 | WP_000826041.1 | DUF2756 family protein | - |
| L0F61_RS22120 (4467777) | 4467777..4468517 | - | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| L0F61_RS22125 (4468514) | 4468514..4469584 | - | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| L0F61_RS22130 (4469586) | 4469586..4470431 | - | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| L0F61_RS22135 (4470428) | 4470428..4471315 | - | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| L0F61_RS22140 (4471379) | 4471379..4472695 | - | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| L0F61_RS22145 (4472954) | 4472954..4473322 | - | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| L0F61_RS22150 (4473319) | 4473319..4473540 | - | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F61_RS22155 (4473672) | 4473672..4474385 | - | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| L0F61_RS22160 (4474387) | 4474387..4475154 | - | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| L0F61_RS22165 (4475151) | 4475151..4476428 | - | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| L0F61_RS22170 (4476425) | 4476425..4477351 | - | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| L0F61_RS22175 (4477411) | 4477411..4478520 | - | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| L0F61_RS22180 (4478942) | 4478942..4479325 | + | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| L0F61_RS22185 (4479303) | 4479303..4479437 | + | 135 | WP_001517957.1 | hypothetical protein | - |
| L0F61_RS22190 (4479520) | 4479520..4480623 | - | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| L0F61_RS22195 (4480945) | 4480945..4481799 | - | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| L0F61_RS22200 (4482045) | 4482045..4483100 | - | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| L0F61_RS22205 (4483093) | 4483093..4483761 | - | 669 | WP_000617729.1 | cell division ATP-binding protein FtsE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.008 |