MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP090529 Location: 311527..322270 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Accession: NZ_CP090529 Location: 311527..322270 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F60_RS01390 (306947) | 306947..308002 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| L0F60_RS01395 (308248) | 308248..309102 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| L0F60_RS01400 (309424) | 309424..310527 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| L0F60_RS01405 (310610) | 310610..310744 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| L0F60_RS01410 (310722) | 310722..311105 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| L0F60_RS01415 (311527) | 311527..312636 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| L0F60_RS01420 (312696) | 312696..313622 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| L0F60_RS01425 (313619) | 313619..314896 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| L0F60_RS01430 (314893) | 314893..315660 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| L0F60_RS01435 (315662) | 315662..316375 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| L0F60_RS01440 (316507) | 316507..316728 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F60_RS01445 (316725) | 316725..317093 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| L0F60_RS01450 (317352) | 317352..318668 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| L0F60_RS01455 (318732) | 318732..319619 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| L0F60_RS01460 (319616) | 319616..320461 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| L0F60_RS01465 (320463) | 320463..321533 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| L0F60_RS01470 (321530) | 321530..322270 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| L0F60_RS01475 (322283) | 322283..322699 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| L0F60_RS01480 (322825) | 322825..324567 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| L0F60_RS01485 (324612) | 324612..325646 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| L0F60_RS01490 (325643) | 325643..326614 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |