MGE detailed information
MGE type: IS/Tn MGE length: 1212 bp
Accession: NZ_CP090400 Location: 919050..920261 Organism: Vibrio cholerae strain PanChol Replicon: chromosome
Accession: NZ_CP090400 Location: 919050..920261 Organism: Vibrio cholerae strain PanChol Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZM82_RS17995 (LZM82_17995) | 914542..914673 | - | 132 | WP_001883067.1 | hypothetical protein | - |
| LZM82_RS18000 (LZM82_18000) | 915192..915470 | - | 279 | WP_000280324.1 | DUF3709 domain-containing protein | - |
| LZM82_RS18005 (LZM82_18005) | 915722..915964 | - | 243 | WP_000107461.1 | hypothetical protein | - |
| LZM82_RS18010 (LZM82_18010) | 916056..916205 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| LZM82_RS18015 (LZM82_18015) | 916178..916429 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| LZM82_RS18020 (LZM82_18020) | 916624..917010 | - | 387 | WP_000703163.1 | VOC family protein | - |
| LZM82_RS18025 (LZM82_18025) | 917000..917101 | - | 102 | WP_001921603.1 | hypothetical protein | - |
| LZM82_RS18030 (LZM82_18030) | 917301..917399 | - | 99 | WP_223225486.1 | DUF3709 domain-containing protein | - |
| LZM82_RS18035 (LZM82_18035) | 917759..918037 | - | 279 | WP_001921601.1 | DUF3709 domain-containing protein | - |
| LZM82_RS18040 (LZM82_18040) | 918155..918272 | - | 118 | Protein_876 | DUF3265 domain-containing protein | - |
| LZM82_RS18045 (LZM82_18045) | 918323..918601 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LZM82_RS18050 (LZM82_18050) | 918594..918863 | + | 270 | WP_000277238.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LZM82_RS18055 (LZM82_18055) | 919050..920261 | - | 1212 | WP_001122813.1 | IS256 family transposase ISSod18 | Transposase |
| LZM82_RS18060 (LZM82_18060) | 920324..920770 | - | 447 | WP_000006157.1 | hypothetical protein | - |
| LZM82_RS18065 (LZM82_18065) | 921020..921145 | - | 126 | WP_001900195.1 | DUF645 family protein | - |
| LZM82_RS18070 (LZM82_18070) | 921538..921810 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LZM82_RS18075 (LZM82_18075) | 921807..922304 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LZM82_RS18080 (LZM82_18080) | 922321..922389 | - | 69 | Protein_884 | acetyltransferase | - |
| LZM82_RS18085 (LZM82_18085) | 922454..922915 | - | 462 | WP_001903091.1 | lipocalin family protein | - |
| LZM82_RS18090 (LZM82_18090) | 923106..923642 | - | 537 | WP_000469482.1 | GNAT family protein | - |
| LZM82_RS18095 (LZM82_18095) | 923900..924121 | - | 222 | WP_032467793.1 | DUF1289 domain-containing protein | - |
| LZM82_RS18100 (LZM82_18100) | 924130..924243 | - | 114 | WP_001900214.1 | hypothetical protein | - |
| LZM82_RS18105 (LZM82_18105) | 924300..924686 | - | 387 | WP_001015867.1 | NUDIX hydrolase | - |
| LZM82_RS18110 (LZM82_18110) | 924930..925172 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|