MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP090304 Location: 337063..351351 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Accession: NZ_CP090304 Location: 337063..351351 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC12_RS01465 () | 332087..332533 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| LPC12_RS01470 () | 332552..336646 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| LPC12_RS01475 () | 336640..336903 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| LPC12_RS01480 () | 336967..337836 | + | 870 | Protein_288 | Protein RhsC | VF |
| LPC12_RS01485 () | 337830..338276 | + | 447 | WP_000935097.1 | protein SciX | - |
| LPC12_RS01490 () | 338839..339276 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| LPC12_RS01495 () | 339329..339604 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 339339..339761 | + | 423 | - | - | Antitoxin Detail |
| LPC12_RS01500 () | 339789..339962 | + | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| LPC12_RS01505 () | 340045..340353 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| LPC12_RS01510 () | 340455..340703 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| LPC12_RS01515 () | 340756..341460 | + | 705 | Protein_295 | integrase core domain-containing protein | - |
| LPC12_RS01520 () | 342210..342722 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| LPC12_RS01525 () | 342806..343543 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| LPC12_RS01530 () | 343567..346077 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| LPC12_RS01535 () | 346099..346569 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| LPC12_RS01540 () | 346975..347796 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| LPC12_RS01545 () | 347879..348119 | + | 241 | Protein_301 | PerC family transcriptional regulator | - |
| LPC12_RS01550 () | 348611..349558 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LPC12_RS01555 () | 349675..349890 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| LPC12_RS01560 () | 349894..350613 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| LPC12_RS01565 () | 350944..351351 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LPC12_RS01570 () | 351722..352489 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| LPC12_RS01575 () | 352598..355042 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LPC12_RS01580 () | 355282..355860 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |