MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP088138 Location: 3733905..3747878 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Accession: NZ_CP088138 Location: 3733905..3747878 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS18500 () | 3729476..3731920 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LRM92_RS18505 () | 3732029..3732796 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LRM92_RS18510 () | 3733167..3733574 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LRM92_RS18515 () | 3733905..3734624 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| LRM92_RS18520 () | 3734628..3734843 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| LRM92_RS18525 () | 3734960..3735907 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LRM92_RS18530 () | 3736399..3736639 | - | 241 | Protein_3631 | PerC family transcriptional regulator | - |
| LRM92_RS18535 () | 3736722..3737543 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| LRM92_RS18540 () | 3737949..3738419 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LRM92_RS18545 () | 3738441..3740951 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| LRM92_RS18550 () | 3740975..3741712 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| LRM92_RS18555 () | 3741796..3742308 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| LRM92_RS18560 () | 3743058..3743762 | - | 705 | Protein_3637 | integrase core domain-containing protein | - |
| LRM92_RS18565 () | 3743815..3744063 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| LRM92_RS18570 () | 3744165..3744473 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| LRM92_RS18575 () | 3744556..3744672 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3744757..3745179 | - | 423 | - | - | Antitoxin Detail |
| LRM92_RS18580 () | 3744914..3745189 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| LRM92_RS18585 () | 3745242..3745679 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| LRM92_RS18590 () | 3746242..3746688 | - | 447 | WP_000935097.1 | protein SciX | - |
| LRM92_RS18595 () | 3746682..3747551 | - | 870 | Protein_3644 | Protein RhsC | VF |
| LRM92_RS18600 () | 3747615..3747878 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| LRM92_RS18605 () | 3747872..3751966 | - | 4095 | WP_000272658.1 | RHS repeat-associated core domain-containing protein | - |
| LRM92_RS18610 () | 3751985..3752431 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |