MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP088138 Location: 313617..322268 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Accession: NZ_CP088138 Location: 313617..322268 Organism: Salmonella enterica subsp. enterica serovar Hissar strain SCPM-O-B-4549 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS01400 (309422) | 309422..310525 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| LRM92_RS01405 (310608) | 310608..310742 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| LRM92_RS01410 (310720) | 310720..311103 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| LRM92_RS01415 (311525) | 311525..312634 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| LRM92_RS01420 (312694) | 312694..313620 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| LRM92_RS01425 (313617) | 313617..314894 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| LRM92_RS01430 (314891) | 314891..315658 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| LRM92_RS01435 (315660) | 315660..316373 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| LRM92_RS01440 (316505) | 316505..316726 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LRM92_RS01445 (316723) | 316723..317091 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LRM92_RS01450 (317350) | 317350..318666 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| LRM92_RS01455 (318730) | 318730..319617 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| LRM92_RS01460 (319614) | 319614..320459 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| LRM92_RS01465 (320461) | 320461..321531 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| LRM92_RS01470 (321528) | 321528..322268 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| LRM92_RS01475 (322281) | 322281..322697 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| LRM92_RS01480 (322823) | 322823..324565 | + | 1743 | WP_249916636.1 | gamma-glutamyltransferase | - |
| LRM92_RS01485 (324610) | 324610..325644 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| LRM92_RS01490 (325641) | 325641..326612 | - | 972 | WP_001038951.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |