MGE detailed information
MGE type: Prophage MGE length: 26053 bp
Accession: NZ_CP087696 Location: 28063..54115 Organism: Xylella taiwanensis strain PLS16B Replicon: chromosome
Accession: NZ_CP087696 Location: 28063..54115 Organism: Xylella taiwanensis strain PLS16B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH57_RS00110 (LPH57_00110) | 23783..24262 | - | 480 | WP_081755474.1 | DUF2726 domain-containing protein | - |
| LPH57_RS00115 (LPH57_00115) | 24559..24831 | - | 273 | WP_038272505.1 | oxidative damage protection protein | - |
| LPH57_RS00120 (LPH57_00120) | 24866..25915 | - | 1050 | WP_038272506.1 | A/G-specific adenine glycosylase | - |
| LPH57_RS00125 (LPH57_00125) | 26007..27218 | - | 1212 | WP_038272508.1 | signal recognition particle-docking protein FtsY | - |
| LPH57_RS00130 (LPH57_00130) | 28063..28536 | + | 474 | WP_038272510.1 | LEA type 2 family protein | - |
| LPH57_RS00135 (LPH57_00135) | 28812..29426 | + | 615 | WP_081755477.1 | HNH endonuclease | - |
| LPH57_RS00140 (LPH57_00140) | 30010..30255 | + | 246 | WP_230428284.1 | hypothetical protein | - |
| LPH57_RS00145 (LPH57_00145) | 30246..30590 | + | 345 | WP_038272464.1 | DUF3653 domain-containing protein | - |
| LPH57_RS00150 (LPH57_00150) | 30653..31057 | - | 405 | WP_200866210.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LPH57_RS00155 (LPH57_00155) | 31066..31338 | - | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LPH57_RS00160 (LPH57_00160) | 31428..32555 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH57_RS00165 (LPH57_00165) | 32568..32912 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH57_RS00170 (LPH57_00170) | 32915..34300 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH57_RS00175 (LPH57_00175) | 34480..34716 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH57_RS00180 (LPH57_00180) | 34725..34931 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH57_RS00185 (LPH57_00185) | 34934..35248 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH57_RS00190 (LPH57_00190) | 35524..36111 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH57_RS00195 (LPH57_00195) | 36308..36451 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH57_RS00200 (LPH57_00200) | 36571..36771 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH57_RS00205 (LPH57_00205) | 36820..37083 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH57_RS00210 (LPH57_00210) | 37087..37248 | - | 162 | WP_160165182.1 | hypothetical protein | - |
| LPH57_RS00215 (LPH57_00215) | 37337..37804 | + | 468 | WP_162814096.1 | DUF3693 domain-containing protein | - |
| LPH57_RS00220 (LPH57_00220) | 37863..38207 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH57_RS00225 (LPH57_00225) | 38243..38515 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH57_RS00230 (LPH57_00230) | 38515..38775 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH57_RS00235 (LPH57_00235) | 38864..39991 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH57_RS00240 (LPH57_00240) | 40004..40348 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH57_RS00245 (LPH57_00245) | 40351..41736 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH57_RS00250 (LPH57_00250) | 41916..42152 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH57_RS00255 (LPH57_00255) | 42161..42367 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH57_RS00260 (LPH57_00260) | 42370..42684 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH57_RS00265 (LPH57_00265) | 42960..43547 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH57_RS00270 (LPH57_00270) | 43744..43887 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH57_RS00275 (LPH57_00275) | 44007..44207 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH57_RS00280 (LPH57_00280) | 44256..44519 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH57_RS00285 (LPH57_00285) | 44523..44684 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH57_RS00290 (LPH57_00290) | 44974..45303 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH57_RS00295 (LPH57_00295) | 45392..45892 | - | 501 | Protein_58 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH57_RS00300 (LPH57_00300) | 46340..46561 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH57_RS00305 (LPH57_00305) | 46558..46881 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH57_RS00310 (LPH57_00310) | 46982..48130 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH57_RS00315 (LPH57_00315) | 48130..48471 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH57_RS00320 (LPH57_00320) | 48475..49542 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH57_RS00325 (LPH57_00325) | 50010..50228 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH57_RS00330 (LPH57_00330) | 50237..50446 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH57_RS00335 (LPH57_00335) | 50446..50568 | - | 123 | WP_230430865.1 | hypothetical protein | - |
| LPH57_RS00340 (LPH57_00340) | 50784..51932 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH57_RS00345 (LPH57_00345) | 52363..52545 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH57_RS00350 (LPH57_00350) | 52576..52767 | - | 192 | WP_160165194.1 | hypothetical protein | - |
| LPH57_RS00360 (LPH57_00360) | 53447..54115 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH57_RS00365 (LPH57_00365) | 54970..56739 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH57_RS00370 (LPH57_00370) | 57061..57888 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH57_RS00375 (LPH57_00375) | 58033..58325 | + | 293 | Protein_73 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|