MGE detailed information
MGE type: Prophage MGE length: 56259 bp
Accession: NZ_CP087691 Location: 1414840..1471098 Organism: Xylella taiwanensis strain PLS422 Replicon: chromosome
Accession: NZ_CP087691 Location: 1414840..1471098 Organism: Xylella taiwanensis strain PLS422 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH48_RS06125 (LPH48_06125) | 1410838..1411839 | - | 1002 | WP_201745829.1 | quinolinate synthase NadA | - |
| LPH48_RS06130 (LPH48_06130) | 1412521..1413267 | - | 747 | WP_114867125.1 | superoxide dismutase | - |
| LPH48_RS06135 (LPH48_06135) | 1413928..1414734 | + | 807 | WP_038271356.1 | TatD family hydrolase | - |
| LPH48_RS06140 (LPH48_06140) | 1414840..1415853 | + | 1014 | WP_038271357.1 | zonular occludens toxin domain-containing protein | - |
| LPH48_RS06145 (LPH48_06145) | 1415899..1416138 | - | 240 | WP_038271358.1 | hypothetical protein | - |
| LPH48_RS06150 (LPH48_06150) | 1416215..1416559 | - | 345 | WP_038271360.1 | DUF3653 domain-containing protein | - |
| LPH48_RS06155 (LPH48_06155) | 1416618..1416794 | - | 177 | WP_230439349.1 | hypothetical protein | - |
| LPH48_RS06160 (LPH48_06160) | 1417378..1417992 | - | 615 | WP_081755477.1 | HNH endonuclease | - |
| LPH48_RS06165 (LPH48_06165) | 1418268..1418741 | - | 474 | WP_038272510.1 | LEA type 2 family protein | - |
| LPH48_RS06170 (LPH48_06170) | 1419586..1420797 | + | 1212 | WP_038272508.1 | signal recognition particle-docking protein FtsY | - |
| LPH48_RS06175 (LPH48_06175) | 1420889..1421938 | + | 1050 | WP_038272506.1 | A/G-specific adenine glycosylase | - |
| LPH48_RS06180 (LPH48_06180) | 1421973..1422245 | + | 273 | WP_038272505.1 | oxidative damage protection protein | - |
| LPH48_RS06185 (LPH48_06185) | 1422542..1423021 | + | 480 | WP_081755474.1 | DUF2726 domain-containing protein | - |
| LPH48_RS06190 (LPH48_06190) | 1424902..1425636 | + | 735 | WP_038272500.1 | hypothetical protein | VF |
| LPH48_RS06195 (LPH48_06195) | 1425741..1426262 | + | 522 | WP_038272498.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LPH48_RS06200 (LPH48_06200) | 1426351..1426935 | + | 585 | WP_038272496.1 | Holliday junction branch migration protein RuvA | - |
| LPH48_RS06205 (LPH48_06205) | 1426992..1428896 | + | 1905 | WP_038272494.1 | potassium transporter Kup | - |
| LPH48_RS06210 (LPH48_06210) | 1429005..1430036 | + | 1032 | WP_038272492.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LPH48_RS06215 (LPH48_06215) | 1430063..1430515 | + | 453 | WP_038272516.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| LPH48_RS06220 (LPH48_06220) | 1430512..1431285 | + | 774 | WP_038272490.1 | protein TolQ | - |
| LPH48_RS06225 (LPH48_06225) | 1431318..1431761 | + | 444 | WP_038272488.1 | ExbD/TolR family protein | - |
| LPH48_RS06230 (LPH48_06230) | 1431751..1432776 | + | 1026 | WP_038272486.1 | cell envelope integrity protein TolA | - |
| LPH48_RS06235 (LPH48_06235) | 1433242..1434567 | + | 1326 | WP_038272484.1 | Tol-Pal system beta propeller repeat protein TolB | - |
| LPH48_RS06240 (LPH48_06240) | 1434630..1435163 | + | 534 | WP_038272481.1 | hypothetical protein | VF |
| LPH48_RS06245 (LPH48_06245) | 1435167..1435994 | + | 828 | WP_038272479.1 | tol-pal system protein YbgF | - |
| LPH48_RS06250 (LPH48_06250) | 1436039..1436719 | + | 681 | WP_051482372.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| LPH48_RS06255 (LPH48_06255) | 1436790..1437539 | - | 750 | WP_038272477.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | - |
| LPH48_RS06260 (LPH48_06260) | 1437635..1438357 | + | 723 | WP_171898053.1 | deoxyribonuclease V | - |
| LPH48_RS06265 (LPH48_06265) | 1438520..1440052 | - | 1533 | WP_038272473.1 | peptide MFS transporter | - |
| LPH48_RS06270 (LPH48_06270) | 1440617..1441108 | + | 492 | WP_038272471.1 | glutathione peroxidase | - |
| LPH48_RS06275 (LPH48_06275) | 1441112..1441891 | - | 780 | WP_038272469.1 | ferredoxin--NADP reductase | - |
| LPH48_RS06280 (LPH48_06280) | 1442026..1443783 | - | 1758 | WP_051482371.1 | phosphomethylpyrimidine synthase ThiC | - |
| LPH48_RS06285 (LPH48_06285) | 1444235..1446310 | + | 2076 | WP_230428285.1 | S46 family peptidase | - |
| LPH48_RS06290 (LPH48_06290) | 1446417..1447061 | + | 645 | WP_038272466.1 | histidine phosphatase family protein | - |
| LPH48_RS06295 (LPH48_06295) | 1447228..1447572 | + | 345 | WP_038272464.1 | DUF3653 domain-containing protein | - |
| LPH48_RS06300 (LPH48_06300) | 1447635..1448039 | - | 405 | WP_200866210.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LPH48_RS06305 (LPH48_06305) | 1448048..1448320 | - | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LPH48_RS06310 (LPH48_06310) | 1448410..1449537 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH48_RS06315 (LPH48_06315) | 1449550..1449894 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH48_RS06320 (LPH48_06320) | 1449897..1451282 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH48_RS06325 (LPH48_06325) | 1451462..1451698 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH48_RS06330 (LPH48_06330) | 1451707..1451913 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH48_RS06335 (LPH48_06335) | 1451916..1452230 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH48_RS06340 (LPH48_06340) | 1452506..1453093 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH48_RS06345 (LPH48_06345) | 1453290..1453433 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH48_RS06350 (LPH48_06350) | 1453553..1453753 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH48_RS06355 (LPH48_06355) | 1453802..1454065 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH48_RS06360 (LPH48_06360) | 1454069..1454230 | - | 162 | WP_160165182.1 | hypothetical protein | - |
| LPH48_RS06365 (LPH48_06365) | 1454319..1454786 | + | 468 | WP_162814096.1 | DUF3693 domain-containing protein | - |
| LPH48_RS06370 (LPH48_06370) | 1454845..1455189 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH48_RS06375 (LPH48_06375) | 1455225..1455497 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH48_RS06380 (LPH48_06380) | 1455497..1455757 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH48_RS06385 (LPH48_06385) | 1455846..1456973 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH48_RS06390 (LPH48_06390) | 1456986..1457330 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH48_RS06395 (LPH48_06395) | 1457333..1458718 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH48_RS06400 (LPH48_06400) | 1458898..1459134 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH48_RS06405 (LPH48_06405) | 1459143..1459349 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH48_RS06410 (LPH48_06410) | 1459352..1459666 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH48_RS06415 (LPH48_06415) | 1459942..1460529 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH48_RS06420 (LPH48_06420) | 1460726..1460869 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH48_RS06425 (LPH48_06425) | 1460989..1461189 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH48_RS06430 (LPH48_06430) | 1461238..1461501 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH48_RS06435 (LPH48_06435) | 1461505..1461666 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH48_RS06440 (LPH48_06440) | 1461956..1462285 | + | 330 | WP_230428286.1 | hypothetical protein ; Integrase | Integrase |
| LPH48_RS06445 (LPH48_06445) | 1462374..1462874 | - | 501 | Protein_1262 | hypothetical protein ; Integrase | Integrase |
| LPH48_RS06450 (LPH48_06450) | 1463322..1463543 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH48_RS06455 (LPH48_06455) | 1463540..1463863 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH48_RS06460 (LPH48_06460) | 1463964..1465112 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH48_RS06465 (LPH48_06465) | 1465112..1465453 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH48_RS06470 (LPH48_06470) | 1465457..1466524 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH48_RS06475 (LPH48_06475) | 1466992..1467210 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH48_RS06480 (LPH48_06480) | 1467219..1467428 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH48_RS06485 (LPH48_06485) | 1467428..1467721 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH48_RS06490 (LPH48_06490) | 1467767..1468915 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH48_RS06495 (LPH48_06495) | 1469346..1469528 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH48_RS06500 (LPH48_06500) | 1469559..1469783 | - | 225 | WP_160199341.1 | hypothetical protein | - |
| LPH48_RS06510 (LPH48_06510) | 1470430..1471098 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH48_RS06515 (LPH48_06515) | 1471953..1473722 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH48_RS06520 (LPH48_06520) | 1474044..1474871 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH48_RS06525 (LPH48_06525) | 1475016..1475308 | + | 293 | Protein_1277 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|