MGE detailed information
MGE type: Prophage MGE length: 26054 bp
Accession: NZ_CP087683 Location: 1444933..1470986 Organism: Xylella taiwanensis strain PLS1135 Replicon: chromosome
Accession: NZ_CP087683 Location: 1444933..1470986 Organism: Xylella taiwanensis strain PLS1135 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH44_RS06275 (LPH44_06275) | 1440653..1441132 | - | 480 | WP_081755474.1 | DUF2726 domain-containing protein | - |
| LPH44_RS06280 (LPH44_06280) | 1441429..1441701 | - | 273 | WP_038272505.1 | oxidative damage protection protein | - |
| LPH44_RS06285 (LPH44_06285) | 1441736..1442785 | - | 1050 | WP_038272506.1 | A/G-specific adenine glycosylase | - |
| LPH44_RS06290 (LPH44_06290) | 1442877..1444088 | - | 1212 | WP_038272508.1 | signal recognition particle-docking protein FtsY | - |
| LPH44_RS06295 (LPH44_06295) | 1444933..1445406 | + | 474 | WP_038272510.1 | LEA type 2 family protein | - |
| LPH44_RS06300 (LPH44_06300) | 1445682..1446296 | + | 615 | WP_081755477.1 | HNH endonuclease | - |
| LPH44_RS06305 (LPH44_06305) | 1446793..1447125 | + | 333 | WP_268980386.1 | DUF3693 domain-containing protein | - |
| LPH44_RS06310 (LPH44_06310) | 1447116..1447460 | + | 345 | WP_038272464.1 | DUF3653 domain-containing protein | - |
| LPH44_RS06315 (LPH44_06315) | 1447523..1447927 | - | 405 | WP_200866210.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LPH44_RS06320 (LPH44_06320) | 1447936..1448208 | - | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LPH44_RS06325 (LPH44_06325) | 1448298..1449425 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH44_RS06330 (LPH44_06330) | 1449438..1449782 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH44_RS06335 (LPH44_06335) | 1449785..1451170 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH44_RS06340 (LPH44_06340) | 1451350..1451586 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH44_RS06345 (LPH44_06345) | 1451595..1451801 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH44_RS06350 (LPH44_06350) | 1451804..1452118 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH44_RS06355 (LPH44_06355) | 1452394..1452981 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH44_RS06360 (LPH44_06360) | 1453178..1453321 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH44_RS06365 (LPH44_06365) | 1453441..1453641 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH44_RS06370 (LPH44_06370) | 1453690..1453953 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH44_RS06375 (LPH44_06375) | 1453957..1454118 | - | 162 | WP_160165182.1 | hypothetical protein | - |
| LPH44_RS06380 (LPH44_06380) | 1454207..1454674 | + | 468 | WP_162814096.1 | DUF3693 domain-containing protein | - |
| LPH44_RS06385 (LPH44_06385) | 1454733..1455077 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH44_RS06390 (LPH44_06390) | 1455113..1455385 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH44_RS06395 (LPH44_06395) | 1455385..1455645 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH44_RS06400 (LPH44_06400) | 1455734..1456861 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH44_RS06405 (LPH44_06405) | 1456874..1457218 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH44_RS06410 (LPH44_06410) | 1457221..1458606 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH44_RS06415 (LPH44_06415) | 1458786..1459022 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH44_RS06420 (LPH44_06420) | 1459031..1459237 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH44_RS06425 (LPH44_06425) | 1459240..1459554 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH44_RS06430 (LPH44_06430) | 1459830..1460417 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH44_RS06435 (LPH44_06435) | 1460614..1460757 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH44_RS06440 (LPH44_06440) | 1460877..1461077 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH44_RS06445 (LPH44_06445) | 1461126..1461389 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH44_RS06450 (LPH44_06450) | 1461393..1461554 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH44_RS06455 (LPH44_06455) | 1461844..1462173 | + | 330 | WP_230428286.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH44_RS06460 (LPH44_06460) | 1462262..1462762 | - | 501 | Protein_1264 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPH44_RS06465 (LPH44_06465) | 1463210..1463431 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH44_RS06470 (LPH44_06470) | 1463428..1463751 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH44_RS06475 (LPH44_06475) | 1463852..1465000 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH44_RS06480 (LPH44_06480) | 1465000..1465341 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH44_RS06485 (LPH44_06485) | 1465345..1466412 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH44_RS06490 (LPH44_06490) | 1466880..1467098 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH44_RS06495 (LPH44_06495) | 1467107..1467316 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH44_RS06500 (LPH44_06500) | 1467316..1467609 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH44_RS06505 (LPH44_06505) | 1467655..1468803 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH44_RS06510 (LPH44_06510) | 1469234..1469416 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH44_RS06515 (LPH44_06515) | 1469447..1469638 | - | 192 | WP_160165194.1 | hypothetical protein | - |
| LPH44_RS06525 (LPH44_06525) | 1470318..1470986 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH44_RS06530 (LPH44_06530) | 1471841..1473610 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH44_RS06535 (LPH44_06535) | 1473932..1474759 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH44_RS06540 (LPH44_06540) | 1474904..1475196 | + | 293 | Protein_1279 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|