MGE detailed information
MGE type: Prophage MGE length: 44032 bp
Accession: NZ_CP087676 Location: 10285..54316 Organism: Xylella taiwanensis strain PLS396 Replicon: chromosome
Accession: NZ_CP087676 Location: 10285..54316 Organism: Xylella taiwanensis strain PLS396 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH43_RS00025 (LPH43_00025) | 5896..6387 | - | 492 | WP_038272471.1 | glutathione peroxidase | - |
| LPH43_RS00030 (LPH43_00030) | 6952..8484 | + | 1533 | WP_038272473.1 | peptide MFS transporter | - |
| LPH43_RS00035 (LPH43_00035) | 8647..9369 | - | 723 | WP_171898053.1 | deoxyribonuclease V | - |
| LPH43_RS00040 (LPH43_00040) | 9465..10214 | + | 750 | WP_038272477.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | - |
| LPH43_RS00045 (LPH43_00045) | 10285..10965 | - | 681 | WP_051482372.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| LPH43_RS00050 (LPH43_00050) | 11010..11837 | - | 828 | WP_038272479.1 | tol-pal system protein YbgF | - |
| LPH43_RS00055 (LPH43_00055) | 11841..12374 | - | 534 | WP_038272481.1 | hypothetical protein | VF |
| LPH43_RS00060 (LPH43_00060) | 12437..13762 | - | 1326 | WP_038272484.1 | Tol-Pal system beta propeller repeat protein TolB | - |
| LPH43_RS00065 (LPH43_00065) | 14228..15253 | - | 1026 | WP_038272486.1 | cell envelope integrity protein TolA | - |
| LPH43_RS00070 (LPH43_00070) | 15243..15686 | - | 444 | WP_038272488.1 | ExbD/TolR family protein | - |
| LPH43_RS00075 (LPH43_00075) | 15719..16492 | - | 774 | WP_038272490.1 | protein TolQ | - |
| LPH43_RS00080 (LPH43_00080) | 16489..16941 | - | 453 | WP_038272516.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| LPH43_RS00085 (LPH43_00085) | 16968..17999 | - | 1032 | WP_038272492.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LPH43_RS00090 (LPH43_00090) | 18108..20012 | - | 1905 | WP_038272494.1 | potassium transporter Kup | - |
| LPH43_RS00095 (LPH43_00095) | 20069..20653 | - | 585 | WP_038272496.1 | Holliday junction branch migration protein RuvA | - |
| LPH43_RS00100 (LPH43_00100) | 20742..21263 | - | 522 | WP_038272498.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LPH43_RS00105 (LPH43_00105) | 21368..22102 | - | 735 | WP_038272500.1 | hypothetical protein | VF |
| LPH43_RS00110 (LPH43_00110) | 23983..24462 | - | 480 | WP_081755474.1 | DUF2726 domain-containing protein | - |
| LPH43_RS00115 (LPH43_00115) | 24759..25031 | - | 273 | WP_038272505.1 | oxidative damage protection protein | - |
| LPH43_RS00120 (LPH43_00120) | 25066..26115 | - | 1050 | WP_038272506.1 | A/G-specific adenine glycosylase | - |
| LPH43_RS00125 (LPH43_00125) | 26207..27418 | - | 1212 | WP_038272508.1 | signal recognition particle-docking protein FtsY | - |
| LPH43_RS00130 (LPH43_00130) | 28263..28736 | + | 474 | WP_038272510.1 | LEA type 2 family protein | - |
| LPH43_RS00135 (LPH43_00135) | 29012..29626 | + | 615 | WP_081755477.1 | HNH endonuclease | - |
| LPH43_RS00140 (LPH43_00140) | 30210..30455 | + | 246 | WP_230428284.1 | hypothetical protein | - |
| LPH43_RS00145 (LPH43_00145) | 30446..30790 | + | 345 | WP_038272464.1 | DUF3653 domain-containing protein | - |
| LPH43_RS00150 (LPH43_00150) | 30853..31269 | - | 417 | WP_038272463.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LPH43_RS00155 (LPH43_00155) | 31266..31538 | - | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LPH43_RS00160 (LPH43_00160) | 31628..32755 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH43_RS00165 (LPH43_00165) | 32768..33112 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH43_RS00170 (LPH43_00170) | 33115..34500 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH43_RS00175 (LPH43_00175) | 34680..34916 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH43_RS00180 (LPH43_00180) | 34925..35131 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH43_RS00185 (LPH43_00185) | 35134..35448 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH43_RS00190 (LPH43_00190) | 35724..36311 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH43_RS00195 (LPH43_00195) | 36508..36651 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH43_RS00200 (LPH43_00200) | 36771..36971 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH43_RS00205 (LPH43_00205) | 37020..37283 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH43_RS00210 (LPH43_00210) | 37287..37448 | - | 162 | WP_160165182.1 | hypothetical protein | - |
| LPH43_RS00215 (LPH43_00215) | 37519..38004 | + | 486 | WP_114867129.1 | DUF3693 domain-containing protein | - |
| LPH43_RS00220 (LPH43_00220) | 38063..38407 | + | 345 | WP_038272511.1 | DUF3653 domain-containing protein | - |
| LPH43_RS00225 (LPH43_00225) | 38443..38715 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| LPH43_RS00230 (LPH43_00230) | 38715..38975 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LPH43_RS00235 (LPH43_00235) | 39064..40191 | - | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH43_RS00240 (LPH43_00240) | 40204..40548 | - | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH43_RS00245 (LPH43_00245) | 40551..41936 | - | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH43_RS00250 (LPH43_00250) | 42116..42352 | - | 237 | WP_230428212.1 | major capsid protein | - |
| LPH43_RS00255 (LPH43_00255) | 42361..42567 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH43_RS00260 (LPH43_00260) | 42570..42884 | - | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH43_RS00265 (LPH43_00265) | 43160..43747 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH43_RS00270 (LPH43_00270) | 43944..44087 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH43_RS00275 (LPH43_00275) | 44207..44407 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH43_RS00280 (LPH43_00280) | 44456..44719 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH43_RS00285 (LPH43_00285) | 44723..44884 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| LPH43_RS00290 (LPH43_00290) | 45174..45503 | + | 330 | WP_230428286.1 | hypothetical protein ; Integrase | Integrase |
| LPH43_RS00295 (LPH43_00295) | 45592..46092 | - | 501 | Protein_58 | hypothetical protein ; Integrase | Integrase |
| LPH43_RS00300 (LPH43_00300) | 46540..46761 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPH43_RS00305 (LPH43_00305) | 46758..47081 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPH43_RS00310 (LPH43_00310) | 47182..48330 | - | 1149 | WP_069636227.1 | zonular occludens toxin domain-containing protein | - |
| LPH43_RS00315 (LPH43_00315) | 48330..48671 | - | 342 | WP_038273089.1 | DUF2523 family protein | - |
| LPH43_RS00320 (LPH43_00320) | 48675..49742 | - | 1068 | WP_152536670.1 | virulence factor TspB C-terminal domain-related protein | - |
| LPH43_RS00325 (LPH43_00325) | 50210..50428 | - | 219 | WP_051482398.1 | major capsid protein | - |
| LPH43_RS00330 (LPH43_00330) | 50437..50646 | - | 210 | WP_230428208.1 | hypothetical protein | - |
| LPH43_RS00335 (LPH43_00335) | 50646..50939 | - | 294 | WP_038273093.1 | single-stranded DNA-binding protein | - |
| LPH43_RS00340 (LPH43_00340) | 50985..52133 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| LPH43_RS00345 (LPH43_00345) | 52564..52746 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| LPH43_RS00350 (LPH43_00350) | 52777..53001 | - | 225 | WP_160199341.1 | hypothetical protein | - |
| LPH43_RS00360 (LPH43_00360) | 53648..54316 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| LPH43_RS00365 (LPH43_00365) | 55171..56940 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| LPH43_RS00370 (LPH43_00370) | 57262..58089 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| LPH43_RS00375 (LPH43_00375) | 58234..58526 | + | 293 | Protein_73 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|