MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 113047 bp
Accession: NZ_CP086388 Location: 1..113047 Organism: Escherichia coli strain 1585m1 Replicon: plasmid p1585m1_B
Accession: NZ_CP086388 Location: 1..113047 Organism: Escherichia coli strain 1585m1 Replicon: plasmid p1585m1_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM401_RS00570 (LM401_00570) | 41..265 | + | 225 | WP_229014371.1 | hypothetical protein | - |
| LM401_RS00575 (LM401_00575) | 277..981 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LM401_RS00580 (LM401_00580) | 1117..1359 | + | 243 | Protein_2 | ISNCY family transposase ISLad2 | Transposase |
| LM401_RS00585 (LM401_00585) | 1408..1635 | + | 228 | WP_181727888.1 | ISNCY family transposase ISKpn21 | Transposase |
| LM401_RS00590 (LM401_00590) | 1676..2644 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| LM401_RS00595 (LM401_00595) | 2677..3072 | + | 396 | Protein_5 | Tn3 family transposase ISEc63 | Transposase |
| LM401_RS00600 (LM401_00600) | 3302..3613 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| LM401_RS00605 (LM401_00605) | 3610..4029 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LM401_RS00610 (LM401_00610) | 4066..4890 | - | 825 | WP_001141174.1 | hypothetical protein | - |
| LM401_RS00615 (LM401_00615) | 5015..5719 | - | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| LM401_RS00620 (LM401_00620) | 5783..5989 | + | 207 | Protein_10 | arsenate reductase | - |
| LM401_RS00625 (LM401_00625) | 6020..6394 | - | 375 | WP_000110555.1 | ArsA-related P-loop ATPase | - |
| LM401_RS00630 (LM401_00630) | 6433..7005 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LM401_RS00635 (LM401_00635) | 7169..10177 | + | 3009 | WP_012291341.1 | Tn3 family transposase ISEc63 | Transposase |
| LM401_RS00640 (LM401_00640) | 10211..10600 | + | 390 | Protein_14 | regulator | - |
| LM401_RS00645 (LM401_00645) | 10661..11605 | + | 945 | WP_023135728.1 | 5'-3' exonuclease H3TH domain-containing protein | - |
| LM401_RS00650 (LM401_00650) | 11605..11871 | + | 267 | WP_000920226.1 | hypothetical protein | - |
| LM401_RS00655 (LM401_00655) | 11874..14213 | + | 2340 | WP_023135727.1 | LAGLIDADG family homing endonuclease | - |
| LM401_RS00660 (LM401_00660) | 14304..14504 | + | 201 | WP_023135726.1 | hypothetical protein | - |
| LM401_RS00665 (LM401_00665) | 14508..14687 | + | 180 | Protein_19 | SPFH/Band 7/PHB domain protein | - |
| LM401_RS00670 (LM401_00670) | 14932..16020 | + | 1089 | Protein_20 | class I SAM-dependent DNA methyltransferase | - |
| LM401_RS00675 (LM401_00675) | 16091..17260 | + | 1170 | Protein_21 | IS3 family transposase ISEc52 | Transposase |
| LM401_RS00680 (LM401_00680) | 17441..17716 | + | 276 | WP_023135696.1 | hypothetical protein | - |
| LM401_RS00685 (LM401_00685) | 17756..17935 | + | 180 | WP_023135695.1 | hypothetical protein | - |
| LM401_RS00690 (LM401_00690) | 17932..18267 | + | 336 | WP_023135694.1 | hypothetical protein | - |
| LM401_RS00695 (LM401_00695) | 18267..18479 | + | 213 | WP_001711118.1 | hypothetical protein | - |
| LM401_RS00700 (LM401_00700) | 19089..20144 | - | 1056 | WP_001711119.1 | replication protein RepA | - |
| LM401_RS00705 (LM401_00705) | 20887..21531 | + | 645 | WP_023135693.1 | hypothetical protein | - |
| LM401_RS00710 (LM401_00710) | 21928..22407 | + | 480 | Protein_28 | metallophosphoesterase | - |
| LM401_RS00715 (LM401_00715) | 22461..23674 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| LM401_RS00720 (LM401_00720) | 23718..23933 | + | 216 | Protein_30 | exonuclease SbcCD subunit D | - |
| LM401_RS00725 (LM401_00725) | 24207..24422 | + | 216 | WP_023135691.1 | hypothetical protein | - |
| LM401_RS00730 (LM401_00730) | 24461..25159 | + | 699 | WP_023135690.1 | lysozyme inhibitor LprI family protein | - |
| LM401_RS00735 (LM401_00735) | 25215..25418 | - | 204 | WP_006812537.1 | putative selenium delivery protein YdfZ | - |
| LM401_RS00740 (LM401_00740) | 25606..25872 | + | 267 | WP_023135689.1 | hypothetical protein | - |
| LM401_RS00745 (LM401_00745) | 25958..26194 | + | 237 | WP_023135688.1 | DUF1380 domain-containing protein | - |
| LM401_RS00750 (LM401_00750) | 26194..26511 | + | 318 | WP_023135687.1 | hypothetical protein | - |
| LM401_RS00755 (LM401_00755) | 26597..27157 | + | 561 | WP_072663008.1 | hypothetical protein | - |
| LM401_RS00760 (LM401_00760) | 28617..29321 | + | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| LM401_RS00765 (LM401_00765) | 29439..29717 | - | 279 | WP_023135667.1 | hypothetical protein | - |
| LM401_RS00770 (LM401_00770) | 29720..31279 | - | 1560 | WP_023135666.1 | DEAD/DEAH box helicase | - |
| LM401_RS00775 (LM401_00775) | 31344..31730 | + | 387 | Protein_41 | ParB/RepB/Spo0J family partition protein | - |
| LM401_RS00780 (LM401_00780) | 31762..32412 | + | 651 | WP_002356418.1 | hypothetical protein | - |
| LM401_RS00785 (LM401_00785) | 32422..32688 | + | 267 | WP_000176291.1 | hypothetical protein | - |
| LM401_RS00790 (LM401_00790) | 32884..33525 | + | 642 | WP_023135664.1 | hypothetical protein | - |
| LM401_RS00795 (LM401_00795) | 33528..34784 | + | 1257 | WP_023135663.1 | phage terminase large subunit | - |
| LM401_RS00800 (LM401_00800) | 34818..36392 | + | 1575 | Protein_46 | hypothetical protein | - |
| LM401_RS00805 (LM401_00805) | 36415..37182 | + | 768 | WP_023135661.1 | hypothetical protein | - |
| LM401_RS00810 (LM401_00810) | 37185..37436 | + | 252 | WP_023135660.1 | hypothetical protein | - |
| LM401_RS00815 (LM401_00815) | 37605..38126 | - | 522 | WP_023135659.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LM401_RS00820 (LM401_00820) | 38134..38403 | - | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LM401_RS00825 (LM401_00825) | 38723..39388 | + | 666 | WP_023135658.1 | AAA family ATPase | - |
| LM401_RS00830 (LM401_00830) | 39394..39747 | + | 354 | WP_161953766.1 | hypothetical protein | - |
| LM401_RS00835 (LM401_00835) | 39800..40567 | - | 768 | WP_001711193.1 | hypothetical protein | - |
| LM401_RS00840 (LM401_00840) | 40850..41575 | + | 726 | WP_023135656.1 | hypothetical protein | - |
| LM401_RS00845 (LM401_00845) | 41636..42976 | + | 1341 | WP_023135655.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| LM401_RS00850 (LM401_00850) | 43064..44248 | + | 1185 | WP_023135654.1 | hypothetical protein | - |
| LM401_RS00855 (LM401_00855) | 44412..45377 | + | 966 | WP_024172709.1 | DNA-processing protein DprA | - |
| LM401_RS00860 (LM401_00860) | 45374..48706 | + | 3333 | WP_228636864.1 | HAD-IA family hydrolase | - |
| LM401_RS00870 (LM401_00870) | 49399..50826 | + | 1428 | WP_228636866.1 | helicase-related protein | - |
| LM401_RS00875 (LM401_00875) | 50823..51311 | + | 489 | WP_023135651.1 | hypothetical protein | - |
| LM401_RS00880 (LM401_00880) | 51461..51580 | + | 120 | Protein_62 | IS3 family transposase | - |
| LM401_RS00885 (LM401_00885) | 51676..52488 | + | 813 | WP_023135650.1 | hypothetical protein | - |
| LM401_RS00890 (LM401_00890) | 52570..53046 | + | 477 | WP_023135649.1 | hypothetical protein | - |
| LM401_RS00895 (LM401_00895) | 53081..54403 | + | 1323 | WP_181727890.1 | DNA ligase | - |
| LM401_RS00900 (LM401_00900) | 54403..54579 | + | 177 | WP_031614921.1 | hypothetical protein | - |
| LM401_RS00905 (LM401_00905) | 54563..54775 | + | 213 | WP_023135646.1 | hypothetical protein | - |
| LM401_RS00910 (LM401_00910) | 54924..55229 | + | 306 | WP_023135645.1 | hypothetical protein | - |
| LM401_RS00920 (LM401_00920) | 56323..56850 | + | 528 | WP_224695515.1 | hypothetical protein | - |
| LM401_RS00925 (LM401_00925) | 56841..57257 | + | 417 | WP_032271783.1 | type II toxin-antitoxin system YafO family toxin | - |
| LM401_RS00930 (LM401_00930) | 57557..58660 | + | 1104 | WP_106509451.1 | site-specific integrase | - |
| LM401_RS00935 (LM401_00935) | 58655..59044 | - | 390 | WP_003980690.1 | hypothetical protein | - |
| LM401_RS00940 (LM401_00940) | 59301..59513 | + | 213 | WP_032187681.1 | hypothetical protein | - |
| LM401_RS00945 (LM401_00945) | 59626..61857 | + | 2232 | WP_124062889.1 | porphyrin biosynthesis protein | - |
| LM401_RS00950 (LM401_00950) | 61953..62120 | + | 168 | WP_229014370.1 | hypothetical protein | - |
| LM401_RS00955 (LM401_00955) | 62183..62887 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LM401_RS00960 (LM401_00960) | 62941..63024 | - | 84 | Protein_77 | hypothetical protein | - |
| LM401_RS00965 (LM401_00965) | 63098..63514 | - | 417 | WP_001044765.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LM401_RS00970 (LM401_00970) | 63511..63741 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LM401_RS00975 (LM401_00975) | 63698..64120 | + | 423 | WP_177952108.1 | hypothetical protein | - |
| LM401_RS00980 (LM401_00980) | 64304..64666 | + | 363 | WP_000533745.1 | hypothetical protein | - |
| LM401_RS00985 (LM401_00985) | 64684..65493 | + | 810 | WP_000654269.1 | hypothetical protein | - |
| LM401_RS00990 (LM401_00990) | 66058..67731 | + | 1674 | WP_000026497.1 | hypothetical protein | - |
| LM401_RS00995 (LM401_00995) | 67922..68228 | + | 307 | Protein_84 | type II toxin-antitoxin system ParD family antitoxin | - |
| LM401_RS01000 (LM401_01000) | 68215..68545 | + | 331 | Protein_85 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LM401_RS01005 (LM401_01005) | 68877..69617 | + | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| LM401_RS01010 (LM401_01010) | 70334..71344 | - | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| LM401_RS01015 (LM401_01015) | 72096..73262 | + | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
| LM401_RS01020 (LM401_01020) | 73262..74233 | + | 972 | WP_228636868.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LM401_RS01030 (LM401_01030) | 75883..78588 | + | 2706 | WP_016239750.1 | HTH-type transcriptional regulator MalT | VF |
| LM401_RS01035 (LM401_01035) | 78631..79374 | - | 744 | Protein_92 | RNA 3'-terminal phosphate cyclase | - |
| LM401_RS01045 (LM401_01045) | 80121..80699 | + | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| LM401_RS01050 (LM401_01050) | 80939..81196 | + | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| LM401_RS01055 (LM401_01055) | 81431..81505 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LM401_RS01060 (LM401_01060) | 81498..82355 | + | 858 | Protein_97 | incFII family plasmid replication initiator RepA | - |
| LM401_RS01065 (LM401_01065) | 83055..83195 | + | 141 | WP_001325044.1 | hypothetical protein | - |
| LM401_RS01070 (LM401_01070) | 83293..83946 | + | 654 | WP_000616806.1 | CPBP family intramembrane metalloprotease | - |
| LM401_RS01075 (LM401_01075) | 84039..84296 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LM401_RS01080 (LM401_01080) | 84229..84630 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LM401_RS01085 (LM401_01085) | 84944..85641 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| LM401_RS01090 (LM401_01090) | 85658..85888 | - | 231 | Protein_103 | IS5 family transposase IS903 | Transposase |
| LM401_RS01095 (LM401_01095) | 85953..86657 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LM401_RS01100 (LM401_01100) | 86710..86775 | + | 66 | Protein_105 | helix-turn-helix domain-containing protein | - |
| LM401_RS01105 (LM401_01105) | 86778..89744 | + | 2967 | WP_001138070.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LM401_RS01110 (LM401_01110) | 89823..90827 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| LM401_RS01115 (LM401_01115) | 91353..92213 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LM401_RS01120 (LM401_01120) | 93034..94404 | - | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| LM401_RS01125 (LM401_01125) | 94519..95655 | - | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| LM401_RS01130 (LM401_01130) | 95706..95933 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| LM401_RS01135 (LM401_01135) | 95957..96148 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| LM401_RS01140 (LM401_01140) | 96630..97172 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| LM401_RS01145 (LM401_01145) | 97185..98045 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| LM401_RS01150 (LM401_01150) | 98278..98982 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LM401_RS01155 (LM401_01155) | 99104..100009 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LM401_RS01160 (LM401_01160) | 100006..101244 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LM401_RS01165 (LM401_01165) | 101244..101828 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LM401_RS01170 (LM401_01170) | 102321..103085 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LM401_RS01175 (LM401_01175) | 103203..103268 | - | 66 | Protein_120 | EAL domain-containing protein | - |
| LM401_RS01180 (LM401_01180) | 103312..103617 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| LM401_RS01185 (LM401_01185) | 103628..104833 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| LM401_RS01190 (LM401_01190) | 104989..105192 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| LM401_RS01195 (LM401_01195) | 105320..106159 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LM401_RS01200 (LM401_01200) | 106153..106500 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LM401_RS01205 (LM401_01205) | 106657..107289 | - | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| LM401_RS01210 (LM401_01210) | 107384..107938 | - | 555 | WP_003159191.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib4 | - |
| LM401_RS01215 (LM401_01215) | 108065..108397 | - | 333 | WP_015063357.1 | quaternary ammonium compound efflux SMR transporter QacG2 | - |
| LM401_RS01220 (LM401_01220) | 108629..109369 | - | 741 | WP_015060105.1 | Metallo-beta-lactamase type 2 | ARG |
| LM401_RS01225 (LM401_01225) | 109522..110535 | + | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| LM401_RS01230 (LM401_01230) | 111010..111714 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LM401_RS01235 (LM401_01235) | 111726..112175 | - | 450 | WP_000241453.1 | HNH endonuclease signature motif containing protein | - |
| LM401_RS01240 (LM401_01240) | 112230..112424 | - | 195 | WP_000159617.1 | hypothetical protein | - |
| LM401_RS01245 (LM401_01245) | 112421..112732 | - | 312 | WP_000172888.1 | hypothetical protein | - |
| LM401_RS01250 (LM401_01250) | 112795..113034 | - | 240 | WP_001180999.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|