MGE detailed information
MGE type: Mobilizable plasmid MGE length: 182426 bp
Accession: NZ_CP086135 Location: 1..182426 Organism: Pantoea agglomerans strain DBM 3797 Replicon: plasmid pPA_DBM3797_2
Accession: NZ_CP086135 Location: 1..182426 Organism: Pantoea agglomerans strain DBM 3797 Replicon: plasmid pPA_DBM3797_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKW31_RS21670 (LKW31_21695) | 100..1173 | + | 1074 | WP_010256943.1 | RepB family plasmid replication initiator protein | - |
| LKW31_RS21675 (LKW31_21700) | 2529..3716 | - | 1188 | WP_172608096.1 | diguanylate phosphodiesterase | - |
| LKW31_RS21680 (LKW31_21705) | 3968..4177 | - | 210 | WP_010256949.1 | DUF1471 domain-containing protein | - |
| LKW31_RS21685 (LKW31_21710) | 4377..6161 | - | 1785 | WP_010256951.1 | GGDEF and EAL domain-containing protein | - |
| LKW31_RS21690 (LKW31_21715) | 6682..6906 | - | 225 | WP_010256955.1 | DUF3606 domain-containing protein | - |
| LKW31_RS21695 (LKW31_21720) | 7275..7514 | + | 240 | WP_022624236.1 | hypothetical protein | - |
| LKW31_RS21700 (LKW31_21725) | 7690..8178 | + | 489 | WP_228312809.1 | Hsp20 family protein | - |
| LKW31_RS21705 (LKW31_21730) | 8252..9016 | - | 765 | WP_172608097.1 | MerR family transcriptional regulator | - |
| LKW31_RS21710 (LKW31_21735) | 9212..9421 | - | 210 | WP_010256969.1 | CsbD family protein | - |
| LKW31_RS21715 (LKW31_21740) | 9593..10810 | - | 1218 | WP_022624239.1 | diguanylate phosphodiesterase | - |
| LKW31_RS21720 (LKW31_21745) | 11769..12002 | + | 234 | WP_060678836.1 | hypothetical protein | - |
| LKW31_RS21725 (LKW31_21750) | 12078..12407 | - | 330 | WP_010256979.1 | hypothetical protein | - |
| LKW31_RS21730 (LKW31_21755) | 13050..14708 | + | 1659 | WP_172608098.1 | methyl-accepting chemotaxis protein | - |
| LKW31_RS21735 (LKW31_21760) | 15311..17236 | + | 1926 | WP_191914327.1 | methyl-accepting chemotaxis protein | - |
| LKW31_RS21740 (LKW31_21765) | 17292..18092 | - | 801 | WP_010671947.1 | MBL fold metallo-hydrolase | - |
| LKW31_RS21745 (LKW31_21770) | 18170..19285 | - | 1116 | WP_172608100.1 | metallophosphoesterase | - |
| LKW31_RS21750 (LKW31_21775) | 19523..21850 | - | 2328 | WP_033770142.1 | FdhF/YdeP family oxidoreductase | - |
| LKW31_RS21755 (LKW31_21780) | 22118..22648 | + | 531 | WP_228312810.1 | cyclophilin-like fold protein | - |
| LKW31_RS21760 (LKW31_21785) | 22822..23169 | - | 348 | WP_003850685.1 | HNH nuclease YajD | - |
| LKW31_RS21765 (LKW31_21790) | 23504..23671 | - | 168 | WP_009093121.1 | hypothetical protein | - |
| LKW31_RS21770 (LKW31_21795) | 23962..27066 | + | 3105 | WP_172608101.1 | efflux RND transporter permease subunit | - |
| LKW31_RS21775 (LKW31_21800) | 27126..28151 | - | 1026 | WP_010671942.1 | alpha/beta hydrolase | - |
| LKW31_RS21780 (LKW31_21805) | 28220..29344 | - | 1125 | WP_228312816.1 | MFS transporter | - |
| LKW31_RS21785 (LKW31_21810) | 29547..30443 | + | 897 | WP_010257019.1 | LysR family transcriptional regulator | - |
| LKW31_RS21790 (LKW31_21815) | 30507..30683 | - | 177 | WP_010257023.1 | KGG domain-containing protein | - |
| LKW31_RS21795 (LKW31_21820) | 30883..31179 | + | 297 | WP_039387382.1 | hypothetical protein | - |
| LKW31_RS21800 (LKW31_21825) | 31224..31511 | - | 288 | WP_033759930.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LKW31_RS21805 (LKW31_21830) | 31511..31750 | - | 240 | WP_010257033.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LKW31_RS21810 (LKW31_21835) | 32110..34083 | + | 1974 | WP_191914328.1 | methyl-accepting chemotaxis protein | - |
| LKW31_RS21815 (LKW31_21840) | 34188..35204 | + | 1017 | WP_010257039.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LKW31_RS21820 (LKW31_21845) | 35254..35922 | - | 669 | WP_031292291.1 | DUF2268 domain-containing putative Zn-dependent protease | - |
| LKW31_RS21825 (LKW31_21850) | 36273..37052 | + | 780 | WP_228312811.1 | MBL fold metallo-hydrolase | - |
| LKW31_RS21830 (LKW31_21855) | 37127..38119 | + | 993 | WP_060678734.1 | helix-turn-helix domain-containing protein | - |
| LKW31_RS21835 (LKW31_21860) | 38211..38612 | - | 402 | WP_010257048.1 | H-NS family nucleoid-associated regulatory protein | - |
| LKW31_RS21840 (LKW31_21865) | 38888..40450 | + | 1563 | WP_172608103.1 | sensor domain-containing diguanylate cyclase | - |
| LKW31_RS21845 (LKW31_21870) | 40519..40956 | + | 438 | WP_172608104.1 | VOC family protein | - |
| LKW31_RS21850 (LKW31_21875) | 41194..41595 | - | 402 | WP_010257055.1 | H-NS family nucleoid-associated regulatory protein | - |
| LKW31_RS21855 (LKW31_21880) | 42468..42653 | + | 186 | WP_010671932.1 | DUF2256 domain-containing protein | - |
| LKW31_RS21860 (LKW31_21885) | 42706..43008 | - | 303 | WP_010257059.1 | hypothetical protein | - |
| LKW31_RS21865 (LKW31_21890) | 43113..43655 | - | 543 | WP_172608105.1 | YfaZ family outer membrane protein | - |
| LKW31_RS21870 (LKW31_21895) | 43719..43955 | - | 237 | WP_010257065.1 | YgdI/YgdR family lipoprotein | - |
| LKW31_RS21875 (LKW31_21900) | 44927..45307 | + | 381 | WP_010671929.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| LKW31_RS21880 (LKW31_21905) | 45802..46026 | + | 225 | WP_010257073.1 | FeoA domain-containing protein | - |
| LKW31_RS21885 (LKW31_21910) | 46026..48353 | + | 2328 | WP_191914330.1 | Fe(2+) transporter permease subunit FeoB | - |
| LKW31_RS21890 (LKW31_21915) | 48789..49826 | - | 1038 | WP_187501773.1 | tyrosine-type recombinase/integrase | - |
| LKW31_RS21895 (LKW31_21920) | 50759..51229 | + | 471 | WP_124890809.1 | SgcJ/EcaC family oxidoreductase | - |
| LKW31_RS21900 (LKW31_21925) | 51524..52741 | - | 1218 | WP_033781081.1 | monooxygenase | - |
| LKW31_RS21905 (LKW31_21930) | 52734..54194 | - | 1461 | WP_191914331.1 | MFS transporter | - |
| LKW31_RS21910 (LKW31_21935) | 54553..55962 | - | 1410 | WP_033759964.1 | LLM class flavin-dependent oxidoreductase | - |
| LKW31_RS21915 (LKW31_21940) | 56031..57443 | - | 1413 | WP_187506005.1 | FAD-dependent oxidoreductase | - |
| LKW31_RS21920 (LKW31_21945) | 57463..58635 | - | 1173 | WP_033759967.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| LKW31_RS21925 (LKW31_21950) | 58910..60799 | + | 1890 | WP_050680244.1 | sigma-54-dependent Fis family transcriptional regulator | - |
| LKW31_RS21930 (LKW31_21955) | 60895..61845 | + | 951 | WP_159227262.1 | sulfonate ABC transporter substrate-binding protein | - |
| LKW31_RS21935 (LKW31_21960) | 62160..62429 | - | 270 | WP_010257103.1 | DUF1471 family periplasmic protein YahO | - |
| LKW31_RS21940 (LKW31_21965) | 62705..63841 | - | 1137 | WP_033786324.1 | HlyD family secretion protein | - |
| LKW31_RS21945 (LKW31_21970) | 63843..64169 | - | 327 | WP_010257107.1 | DUF3302 domain-containing protein | - |
| LKW31_RS21950 (LKW31_21975) | 64764..66416 | + | 1653 | WP_228312812.1 | intermembrane transport protein PqiB | - |
| LKW31_RS21955 (LKW31_21980) | 66557..66808 | + | 252 | WP_022624281.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LKW31_RS21960 (LKW31_21985) | 66805..67092 | + | 288 | WP_172608109.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LKW31_RS21965 (LKW31_21990) | 67362..67652 | - | 291 | WP_010257118.1 | XRE family transcriptional regulator | - |
| LKW31_RS21970 (LKW31_21995) | 67683..67958 | - | 276 | Protein_60 | SAM-dependent DNA methyltransferase | - |
| LKW31_RS21975 (LKW31_22000) | 68115..68327 | + | 213 | Protein_61 | haloacid dehalogenase type II | - |
| LKW31_RS21980 (LKW31_22005) | 68432..68797 | - | 366 | WP_022624285.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
| LKW31_RS21985 (LKW31_22010) | 68794..69114 | - | 321 | WP_022624286.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| LKW31_RS21990 (LKW31_22015) | 69114..70781 | - | 1668 | WP_172608110.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| LKW31_RS21995 (LKW31_22020) | 70781..71683 | - | 903 | WP_045139865.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| LKW31_RS22000 (LKW31_22025) | 71683..73662 | - | 1980 | WP_182500971.1 | bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA | - |
| LKW31_RS22005 (LKW31_22030) | 73659..74642 | - | 984 | WP_010257142.1 | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | - |
| LKW31_RS22010 (LKW31_22035) | 74644..75780 | - | 1137 | WP_172608112.1 | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | - |
| LKW31_RS22015 (LKW31_22040) | 76479..77057 | + | 579 | WP_172608116.1 | YceI family protein | - |
| LKW31_RS22020 (LKW31_22045) | 77080..77865 | - | 786 | WP_022624292.1 | membrane protein | - |
| LKW31_RS22025 (LKW31_22050) | 77862..78362 | - | 501 | WP_080701328.1 | RNA polymerase sigma factor | - |
| LKW31_RS22030 (LKW31_22055) | 78399..78935 | - | 537 | WP_010257155.1 | tetratricopeptide repeat protein | - |
| LKW31_RS22035 (LKW31_22060) | 79079..80092 | - | 1014 | WP_033786442.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LKW31_RS22040 (LKW31_22065) | 80201..81211 | + | 1011 | WP_172608117.1 | LacI family DNA-binding transcriptional regulator | - |
| LKW31_RS22045 (LKW31_22070) | 81813..82256 | + | 444 | WP_033744181.1 | PACE efflux transporter | - |
| LKW31_RS22050 (LKW31_22075) | 82491..82694 | + | 204 | WP_010257166.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| LKW31_RS22055 (LKW31_22080) | 83232..83444 | - | 213 | WP_228312813.1 | DUF333 domain-containing protein | - |
| LKW31_RS22060 (LKW31_22085) | 84103..86976 | + | 2874 | WP_192034259.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| LKW31_RS22065 (LKW31_22090) | 87017..87334 | + | 318 | WP_033760000.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| LKW31_RS22070 (LKW31_22095) | 87397..88641 | - | 1245 | WP_228312814.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| LKW31_RS22075 (LKW31_22100) | 88638..90914 | - | 2277 | WP_228312815.1 | type I secretion system permease/ATPase | - |
| LKW31_RS22080 (LKW31_22105) | 91003..92217 | - | 1215 | WP_071778629.1 | TolC family protein | - |
| LKW31_RS22085 (LKW31_22110) | 92613..105383 | - | 12771 | WP_228312802.1 | Ig-like domain-containing protein | - |
| LKW31_RS22090 (LKW31_22115) | 105747..106466 | - | 720 | WP_228312803.1 | hypothetical protein | - |
| LKW31_RS22095 (LKW31_22120) | 106607..107242 | - | 636 | WP_022624189.1 | LuxR family transcriptional regulator | - |
| LKW31_RS22100 (LKW31_22125) | 107288..107878 | - | 591 | WP_010256759.1 | helix-turn-helix domain-containing protein | - |
| LKW31_RS22105 (LKW31_22130) | 108904..109221 | + | 318 | WP_010256762.1 | hypothetical protein | - |
| LKW31_RS22110 (LKW31_22135) | 109231..109452 | + | 222 | WP_010256766.1 | hypothetical protein | - |
| LKW31_RS22115 (LKW31_22140) | 109547..110077 | + | 531 | WP_010256772.1 | fimbrial protein | - |
| LKW31_RS22120 (LKW31_22145) | 110140..110877 | + | 738 | WP_172608078.1 | molecular chaperone | - |
| LKW31_RS22125 (LKW31_22150) | 110915..113494 | + | 2580 | WP_228312804.1 | fimbria/pilus outer membrane usher protein | - |
| LKW31_RS22130 (LKW31_22155) | 113507..114562 | + | 1056 | WP_172608080.1 | fimbrial protein | - |
| LKW31_RS22135 (LKW31_22160) | 114622..115284 | + | 663 | WP_010256781.1 | response regulator transcription factor | - |
| LKW31_RS22140 (LKW31_22165) | 115319..116641 | + | 1323 | WP_010256785.1 | TolC family outer membrane protein | - |
| LKW31_RS22145 (LKW31_22170) | 116667..117926 | + | 1260 | WP_022624194.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| LKW31_RS22150 (LKW31_22175) | 117943..120126 | + | 2184 | WP_072123950.1 | peptidase domain-containing ABC transporter | - |
| LKW31_RS22155 (LKW31_22180) | 120119..120553 | + | 435 | WP_010256796.1 | DcrB-related protein | - |
| LKW31_RS22160 (LKW31_22185) | 120666..121163 | - | 498 | WP_022624196.1 | FidL-like protein | - |
| LKW31_RS22165 (LKW31_22190) | 121160..121993 | - | 834 | WP_010256802.1 | winged helix-turn-helix domain-containing protein | - |
| LKW31_RS22170 (LKW31_22195) | 122194..123114 | - | 921 | WP_033759854.1 | substrate-binding domain-containing protein | - |
| LKW31_RS22175 (LKW31_22200) | 123183..123962 | - | 780 | WP_228312805.1 | TIM barrel protein | - |
| LKW31_RS22180 (LKW31_22205) | 123962..124975 | - | 1014 | WP_228312806.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LKW31_RS22185 (LKW31_22210) | 124972..126435 | - | 1464 | WP_050680284.1 | sugar porter family MFS transporter | - |
| LKW31_RS22190 (LKW31_22215) | 126625..128583 | + | 1959 | WP_172608084.1 | sigma 54-interacting transcriptional regulator | - |
| LKW31_RS22195 (LKW31_22220) | 128728..129342 | + | 615 | WP_010671991.1 | TetR/AcrR family transcriptional regulator | - |
| LKW31_RS22200 (LKW31_22225) | 129580..130863 | + | 1284 | WP_033759862.1 | beta-ketoacyl-ACP synthase II | - |
| LKW31_RS22205 (LKW31_22230) | 131105..131983 | + | 879 | WP_010256830.1 | ROK family protein | - |
| LKW31_RS22210 (LKW31_22235) | 132098..133060 | - | 963 | WP_033760007.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LKW31_RS22455 | 133391..133513 | - | 123 | WP_254920079.1 | hypothetical protein | - |
| LKW31_RS22215 (LKW31_22240) | 133522..134307 | - | 786 | WP_052271907.1 | MipA/OmpV family protein | - |
| LKW31_RS22220 (LKW31_22245) | 134437..135135 | + | 699 | WP_010256840.1 | response regulator | - |
| LKW31_RS22225 (LKW31_22250) | 135132..136301 | + | 1170 | WP_124890772.1 | ATP-binding protein | - |
| LKW31_RS22230 (LKW31_22255) | 136395..137528 | + | 1134 | WP_010256842.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LKW31_RS22235 (LKW31_22260) | 137525..140569 | + | 3045 | WP_172608085.1 | efflux RND transporter permease subunit | - |
| LKW31_RS22240 (LKW31_22265) | 140620..140865 | - | 246 | WP_010256845.1 | hypothetical protein | - |
| LKW31_RS22245 (LKW31_22270) | 140937..141842 | - | 906 | WP_022624205.1 | LysR family transcriptional regulator | - |
| LKW31_RS22250 (LKW31_22275) | 141947..142729 | + | 783 | WP_033774026.1 | acetolactate decarboxylase | - |
| LKW31_RS22255 (LKW31_22280) | 142744..144423 | + | 1680 | WP_010256852.1 | acetolactate synthase AlsS | - |
| LKW31_RS22260 (LKW31_22285) | 144445..145218 | + | 774 | WP_022624207.1 | (S)-acetoin forming diacetyl reductase | - |
| LKW31_RS22265 (LKW31_22290) | 145424..146875 | + | 1452 | WP_191914321.1 | flagellin | - |
| LKW31_RS22270 (LKW31_22295) | 147217..148530 | + | 1314 | WP_010256858.1 | CitMHS family transporter | - |
| LKW31_RS22275 (LKW31_22300) | 148698..149537 | + | 840 | WP_159227283.1 | MBL fold metallo-hydrolase | - |
| LKW31_RS22280 (LKW31_22305) | 149722..149973 | + | 252 | WP_010256861.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| LKW31_RS22285 (LKW31_22310) | 149970..150224 | + | 255 | WP_010256862.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LKW31_RS22290 (LKW31_22315) | 150280..152826 | - | 2547 | WP_172608087.1 | excinuclease ABC subunit UvrA | - |
| LKW31_RS22295 (LKW31_22320) | 153490..153948 | + | 459 | WP_172608114.1 | hypothetical protein | - |
| LKW31_RS22300 (LKW31_22325) | 153942..154235 | + | 294 | WP_022624214.1 | DUF1493 family protein | - |
| LKW31_RS22305 (LKW31_22330) | 154335..155428 | + | 1094 | WP_191914342.1 | IS3 family transposase | - |
| LKW31_RS22310 (LKW31_22335) | 155642..157120 | - | 1479 | WP_033759886.1 | YsnF/AvaK domain-containing protein | - |
| LKW31_RS22315 (LKW31_22340) | 157407..157976 | - | 570 | WP_154210805.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LKW31_RS22320 (LKW31_22345) | 158235..158819 | + | 585 | WP_172608088.1 | GNAT family protein | - |
| LKW31_RS22325 (LKW31_22350) | 158875..161010 | - | 2136 | WP_172608089.1 | EAL domain-containing protein | - |
| LKW31_RS22330 (LKW31_22355) | 161416..161655 | - | 240 | WP_010256895.1 | hypothetical protein | - |
| LKW31_RS22335 (LKW31_22360) | 162018..163451 | - | 1434 | WP_172608090.1 | methyl-accepting chemotaxis protein | - |
| LKW31_RS22340 (LKW31_22365) | 163798..165579 | + | 1782 | WP_172608091.1 | GGDEF and EAL domain-containing protein | - |
| LKW31_RS22345 (LKW31_22370) | 165604..167187 | - | 1584 | WP_172608092.1 | sensor domain-containing diguanylate cyclase | - |
| LKW31_RS22350 (LKW31_22375) | 167586..167759 | - | 174 | WP_010671965.1 | hypothetical protein | - |
| LKW31_RS22355 (LKW31_22380) | 168278..169189 | + | 912 | WP_154210802.1 | GNAT family N-acetyltransferase | - |
| LKW31_RS22360 (LKW31_22385) | 169191..169436 | - | 246 | WP_129063453.1 | hypothetical protein | - |
| LKW31_RS22365 (LKW31_22390) | 169819..170364 | + | 546 | WP_228312807.1 | chorismate mutase | - |
| LKW31_RS22370 (LKW31_22395) | 170387..171577 | + | 1191 | WP_172608093.1 | cytochrome P450 | - |
| LKW31_RS22375 (LKW31_22400) | 171598..172602 | - | 1005 | WP_163852362.1 | LacI family DNA-binding transcriptional regulator | - |
| LKW31_RS22380 (LKW31_22405) | 172632..174047 | - | 1416 | WP_228312808.1 | sucrose-6-phosphate hydrolase | - |
| LKW31_RS22385 (LKW31_22410) | 174047..175417 | - | 1371 | WP_010256928.1 | sucrose-specific PTS transporter subunit IIBC | - |
| LKW31_RS22390 (LKW31_22415) | 175485..177020 | - | 1536 | WP_033774052.1 | carbohydrate porin | - |
| LKW31_RS22395 (LKW31_22420) | 177179..178105 | - | 927 | WP_172608095.1 | aminoimidazole riboside kinase | - |
| LKW31_RS22400 (LKW31_22425) | 178324..179295 | - | 972 | WP_010256937.1 | ParB family protein | - |
| LKW31_RS22405 (LKW31_22430) | 179292..180494 | - | 1203 | WP_010256940.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|