MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP086118 Location: 3699042..3713015 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Accession: NZ_CP086118 Location: 3699042..3713015 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLY43_RS18190 () | 3694613..3697057 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LLY43_RS18195 () | 3697166..3697933 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LLY43_RS18200 () | 3698304..3698711 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LLY43_RS18205 () | 3699042..3699761 | + | 720 | WP_022630913.1 | adhesin/invasin protein PagN | - |
| LLY43_RS18210 () | 3699765..3699980 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| LLY43_RS18215 () | 3700097..3701044 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LLY43_RS18220 () | 3701536..3701776 | - | 241 | Protein_3567 | PerC family transcriptional regulator | - |
| LLY43_RS18225 () | 3701859..3702680 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| LLY43_RS18230 () | 3703086..3703556 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LLY43_RS18235 () | 3703578..3706088 | - | 2511 | WP_000669634.1 | fimbrial biogenesis outer membrane usher protein | - |
| LLY43_RS18240 () | 3706112..3706849 | - | 738 | WP_001535430.1 | pili assembly chaperone SafB | - |
| LLY43_RS18245 () | 3706933..3707445 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| LLY43_RS18250 () | 3708195..3708899 | - | 705 | Protein_3573 | integrase core domain-containing protein | - |
| LLY43_RS18255 () | 3708952..3709200 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| LLY43_RS18260 () | 3709302..3709610 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| LLY43_RS18265 () | 3709693..3709809 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3709894..3710316 | - | 423 | - | - | Antitoxin Detail |
| LLY43_RS18270 () | 3710051..3710326 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| LLY43_RS18275 () | 3710379..3710816 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| LLY43_RS18280 () | 3711379..3711825 | - | 447 | WP_000935097.1 | protein SciX | - |
| LLY43_RS18285 () | 3711819..3712688 | - | 870 | Protein_3580 | polymorphic toxin type 47 domain-containing protein | - |
| LLY43_RS18290 () | 3712752..3713015 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| LLY43_RS18295 () | 3713009..3717103 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| LLY43_RS18300 () | 3717122..3717568 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |