MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP085987 Location: 3605593..3616336 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Accession: NZ_CP085987 Location: 3605593..3616336 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKX03_RS18125 (3601013) | 3601013..3602068 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| LKX03_RS18130 (3602314) | 3602314..3603168 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| LKX03_RS18135 (3603490) | 3603490..3604593 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| LKX03_RS18140 (3604676) | 3604676..3604810 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| LKX03_RS18145 (3604788) | 3604788..3605171 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| LKX03_RS18150 (3605593) | 3605593..3606702 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| LKX03_RS18155 (3606762) | 3606762..3607688 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| LKX03_RS18160 (3607685) | 3607685..3608962 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| LKX03_RS18165 (3608959) | 3608959..3609726 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LKX03_RS18170 (3609728) | 3609728..3610441 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| LKX03_RS18175 (3610573) | 3610573..3610794 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LKX03_RS18180 (3610791) | 3610791..3611159 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LKX03_RS18185 (3611418) | 3611418..3612734 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| LKX03_RS18190 (3612798) | 3612798..3613685 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| LKX03_RS18195 (3613682) | 3613682..3614527 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| LKX03_RS18200 (3614529) | 3614529..3615599 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LKX03_RS18205 (3615596) | 3615596..3616336 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| LKX03_RS18210 (3616349) | 3616349..3616765 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| LKX03_RS18215 (3616891) | 3616891..3618633 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| LKX03_RS18220 (3618678) | 3618678..3619712 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| LKX03_RS18225 (3619709) | 3619709..3620680 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |