MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP085987 Location: 2031692..2045665 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Accession: NZ_CP085987 Location: 2031692..2045665 Organism: Salmonella enterica strain SZL 38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LKX03_RS10780 () | 2027263..2029707 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LKX03_RS10785 () | 2029816..2030583 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LKX03_RS10790 () | 2030954..2031361 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LKX03_RS10795 () | 2031692..2032411 | + | 720 | WP_022630913.1 | hypothetical protein | VF |
| LKX03_RS10800 () | 2032415..2032630 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| LKX03_RS10805 () | 2032747..2033694 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LKX03_RS10810 () | 2034186..2034426 | - | 241 | Protein_2035 | PerC family transcriptional regulator | - |
| LKX03_RS10815 () | 2034509..2035330 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| LKX03_RS10820 () | 2035736..2036206 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LKX03_RS10825 () | 2036228..2038738 | - | 2511 | WP_000669634.1 | hypothetical protein | VF |
| LKX03_RS10830 () | 2038762..2039499 | - | 738 | WP_001535430.1 | hypothetical protein | VF |
| LKX03_RS10835 () | 2039583..2040095 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| LKX03_RS10840 () | 2040845..2041549 | - | 705 | Protein_2041 | integrase core domain-containing protein | - |
| LKX03_RS10845 () | 2041602..2041850 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| LKX03_RS10850 () | 2041952..2042260 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| LKX03_RS10855 () | 2042343..2042459 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 2042544..2042966 | - | 423 | - | - | Antitoxin Detail |
| LKX03_RS10860 () | 2042701..2042976 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| LKX03_RS10865 () | 2043029..2043466 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| LKX03_RS10870 () | 2044029..2044475 | - | 447 | WP_000935097.1 | protein SciX | - |
| LKX03_RS10875 () | 2044469..2045338 | - | 870 | Protein_2048 | hypothetical protein | VF |
| LKX03_RS10880 () | 2045402..2045665 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| LKX03_RS10885 () | 2045659..2049753 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| LKX03_RS10890 () | 2049772..2050218 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |