MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP085820 Location: 2852008..2866296 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Wartortle Replicon: chromosome
Accession: NZ_CP085820 Location: 2852008..2866296 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Wartortle Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF64_RS13445 () | 2847034..2847480 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| LJF64_RS13450 () | 2847499..2851591 | + | 4093 | Protein_2610 | DUF6531 domain-containing protein | - |
| LJF64_RS13455 () | 2851585..2851848 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| LJF64_RS13460 () | 2851912..2852781 | + | 870 | Protein_2612 | polymorphic toxin type 47 domain-containing protein | - |
| LJF64_RS13465 () | 2852775..2853221 | + | 447 | WP_000935097.1 | protein SciX | - |
| LJF64_RS13470 () | 2853784..2854221 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| LJF64_RS13475 () | 2854274..2854549 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 2854284..2854706 | + | 423 | - | - | Antitoxin Detail |
| LJF64_RS13480 () | 2854734..2854907 | + | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| LJF64_RS13485 () | 2854990..2855298 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| LJF64_RS13490 () | 2855400..2855648 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| LJF64_RS13495 () | 2855701..2856405 | + | 705 | Protein_2619 | integrase core domain-containing protein | - |
| LJF64_RS13500 () | 2857155..2857667 | + | 513 | WP_105907557.1 | pilus assembly protein | - |
| LJF64_RS13505 () | 2857751..2858488 | + | 738 | WP_001535430.1 | pili assembly chaperone SafB | - |
| LJF64_RS13510 () | 2858512..2861022 | + | 2511 | WP_000669634.1 | fimbrial biogenesis outer membrane usher protein | - |
| LJF64_RS13515 () | 2861044..2861514 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| LJF64_RS13520 () | 2861920..2862741 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| LJF64_RS13525 () | 2862824..2863064 | + | 241 | Protein_2625 | PerC family transcriptional regulator | - |
| LJF64_RS13530 () | 2863556..2864503 | + | 948 | Protein_2626 | LysR family transcriptional regulator | - |
| LJF64_RS13535 () | 2864620..2864835 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| LJF64_RS13540 () | 2864839..2865558 | - | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| LJF64_RS13545 () | 2865889..2866296 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LJF64_RS13550 () | 2866667..2867434 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| LJF64_RS13555 () | 2867543..2869987 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LJF64_RS13560 () | 2870227..2870805 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |