MGE detailed information
MGE type: Prophage MGE length: 8651 bp
Accession: NZ_CP085819 Location: 2208390..2217040 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Accession: NZ_CP085819 Location: 2208390..2217040 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain Blastoise Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF65_RS10310 (2204195) | 2204195..2205298 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| LJF65_RS10315 (2205381) | 2205381..2205515 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| LJF65_RS10320 (2205493) | 2205493..2205876 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| LJF65_RS10325 (2206298) | 2206298..2207407 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| LJF65_RS10330 (2207467) | 2207467..2208393 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| LJF65_RS10335 (2208390) | 2208390..2209667 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| LJF65_RS10340 (2209664) | 2209664..2210431 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| LJF65_RS10345 (2210433) | 2210433..2211146 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| LJF65_RS10350 (2211278) | 2211278..2211499 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LJF65_RS10355 (2211496) | 2211496..2211864 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LJF65_RS10360 (2212123) | 2212123..2213439 | + | 1317 | WP_105907555.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| LJF65_RS10365 (2213502) | 2213502..2214389 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| LJF65_RS10370 (2214386) | 2214386..2215231 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| LJF65_RS10375 (2215233) | 2215233..2216303 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| LJF65_RS10380 (2216300) | 2216300..2217040 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| LJF65_RS10385 (2217053) | 2217053..2217469 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| LJF65_RS10390 (2217595) | 2217595..2219337 | + | 1743 | WP_070130146.1 | gamma-glutamyltransferase | - |
| LJF65_RS10395 (2219382) | 2219382..2220417 | - | 1036 | Protein_2014 | phosphotriesterase | - |
| LJF65_RS10400 (2220414) | 2220414..2221385 | - | 972 | WP_001038951.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |