MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP085699 Location: 1030320..1030496 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Accession: NZ_CP085699 Location: 1030320..1030496 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain S29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJN59_RS04945 (1025433) | 1025433..1025813 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| LJN59_RS04950 (1025869) | 1025869..1028436 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| LJN59_RS04955 (1028595) | 1028595..1029116 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| LJN59_RS04960 (1029288) | 1029288..1029944 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| LJN59_RS04965 (1030291) | 1030291..1030496 | + | 206 | Protein_974 | IS5 family transposase ISEcl3 | Transposase |
| LJN59_RS04970 (1030569) | 1030569..1031096 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LJN59_RS04975 (1031093) | 1031093..1031383 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LJN59_RS04980 (1031653) | 1031653..1031831 | - | 179 | Protein_977 | IS3 family transposase | - |
| LJN59_RS04985 (1032072) | 1032072..1032398 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| LJN59_RS04990 (1032671) | 1032671..1033018 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| LJN59_RS04995 (1033003) | 1033003..1033452 | - | 450 | WP_000381610.1 | membrane protein | - |
| LJN59_RS05000 (1033883) | 1033883..1034326 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| LJN59_RS05005 (1034783) | 1034783..1035433 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |