MGE detailed information
MGE type: Prophage MGE length: 16267 bp
Accession: NZ_CP084647 Location: 440574..456840 Organism: Yersinia ruckeri strain 17Y0157 Replicon: chromosome
Accession: NZ_CP084647 Location: 440574..456840 Organism: Yersinia ruckeri strain 17Y0157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL89_RS01950 (LGL89_01960) | 437224..438567 | - | 1344 | WP_052690339.1 | DUF1173 family protein | - |
| LGL89_RS01955 (LGL89_01965) | 438697..439098 | - | 402 | WP_045844413.1 | putative zinc ribbon protein | - |
| LGL89_RS01960 (LGL89_01970) | 439181..440224 | - | 1044 | WP_045844414.1 | inovirus-type Gp2 protein | - |
| LGL89_RS01965 (LGL89_01975) | 440574..440780 | - | 207 | WP_019082618.1 | AlpA family phage regulatory protein | - |
| LGL89_RS01970 (LGL89_01980) | 441202..442443 | + | 1242 | WP_234054907.1 | hypothetical protein | - |
| LGL89_RS01975 (LGL89_01985) | 442959..443396 | + | 438 | WP_045844416.1 | hypothetical protein | - |
| LGL89_RS01980 (LGL89_01990) | 443416..444684 | + | 1269 | WP_045844417.1 | hypothetical protein | - |
| LGL89_RS01985 (LGL89_01995) | 444907..445344 | + | 438 | WP_045844418.1 | hypothetical protein | - |
| LGL89_RS01990 (LGL89_02000) | 445427..446248 | + | 822 | WP_045844419.1 | DUF932 domain-containing protein | - |
| LGL89_RS01995 (LGL89_02005) | 446608..447039 | + | 432 | WP_045844420.1 | antirestriction protein | - |
| LGL89_RS02000 (LGL89_02010) | 447131..447502 | + | 372 | WP_045844421.1 | TA system toxin CbtA family protein | Toxin Detail |
| LGL89_RS02005 (LGL89_02015) | 447499..447867 | + | 369 | WP_045844422.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LGL89_RS02010 (LGL89_02020) | 448333..449589 | + | 1257 | Protein_388 | Prophage integrase IntA ; Integrase | Integrase |
| LGL89_RS02015 (LGL89_02025) | 449661..449966 | + | 306 | WP_234054908.1 | hypothetical protein | - |
| LGL89_RS02020 (LGL89_02030) | 450017..451273 | - | 1257 | WP_234054909.1 | hypothetical protein | - |
| LGL89_RS02030 (LGL89_02040) | 452683..453057 | + | 375 | Protein_392 | Prophage integrase IntA ; Integrase | Integrase |
| LGL89_RS02035 (LGL89_02045) | 453231..453485 | + | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LGL89_RS02040 (LGL89_02050) | 453475..453765 | + | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL89_RS02045 (LGL89_02055) | 454029..454418 | + | 390 | WP_096823270.1 | restriction endonuclease subunit S | - |
| LGL89_RS02050 (LGL89_02060) | 454542..455117 | + | 576 | WP_234049239.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LGL89_RS02055 (LGL89_02065) | 455120..455776 | + | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| LGL89_RS02060 (LGL89_02070) | 455773..456840 | + | 1068 | WP_038245756.1 | macro domain-containing protein | Antitoxin Detail |
| LGL89_RS02065 (LGL89_02075) | 456861..457127 | + | 267 | Protein_399 | hypothetical protein | - |
| LGL89_RS02070 (LGL89_02080) | 457146..457544 | - | 399 | Protein_400 | integrase core domain-containing protein | - |
| LGL89_RS02075 (LGL89_02085) | 457543..457839 | + | 297 | Protein_401 | integrase core domain-containing protein | - |
| LGL89_RS02080 (LGL89_02090) | 457868..457973 | - | 106 | Protein_402 | transposase | - |
| LGL89_RS02085 (LGL89_02095) | 457987..458115 | - | 129 | Protein_403 | helix-turn-helix domain-containing protein | - |
| LGL89_RS02090 (LGL89_02100) | 458265..458495 | + | 231 | Protein_404 | DUF4942 domain-containing protein | - |
| LGL89_RS02095 (LGL89_02105) | 458570..458965 | + | 396 | WP_038245317.1 | DUF6088 family protein | - |
| LGL89_RS02100 (LGL89_02110) | 458958..459908 | + | 951 | WP_038275283.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LGL89_RS02105 (LGL89_02115) | 460279..460404 | + | 126 | Protein_407 | antirestriction protein | - |
| LGL89_RS02110 (LGL89_02120) | 460430..460603 | + | 174 | Protein_408 | type IV toxin-antitoxin system YeeU family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|