MGE detailed information
MGE type: IScluster/Tn MGE length: 5955 bp
Accession: NZ_CP084642 Location: 3177887..3183841 Organism: Yersinia ruckeri strain 17Y0161 Replicon: chromosome
Accession: NZ_CP084642 Location: 3177887..3183841 Organism: Yersinia ruckeri strain 17Y0161 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGL90_RS14455 (LGL90_14485) | 3173375..3174529 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| LGL90_RS14460 (LGL90_14490) | 3175132..3175305 | - | 174 | Protein_2802 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LGL90_RS14465 (LGL90_14495) | 3175331..3175456 | - | 126 | Protein_2803 | antirestriction protein | - |
| LGL90_RS14470 (LGL90_14500) | 3175824..3176774 | - | 951 | WP_234049238.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LGL90_RS14475 (LGL90_14505) | 3176767..3177162 | - | 396 | WP_038245317.1 | DUF6088 family protein | Antitoxin Detail |
| LGL90_RS14480 (LGL90_14510) | 3177237..3177467 | - | 231 | Protein_2806 | DUF4942 domain-containing protein | - |
| LGL90_RS14485 (LGL90_14515) | 3177617..3177745 | + | 129 | Protein_2807 | helix-turn-helix domain-containing protein | - |
| LGL90_RS14490 (LGL90_14520) | 3177738..3177858 | + | 121 | Protein_2808 | transposase | - |
| LGL90_RS14495 (LGL90_14525) | 3177887..3178183 | - | 297 | Protein_2809 | IS3 family transposase IS1400 | Transposase |
| LGL90_RS14500 (LGL90_14530) | 3178182..3178580 | + | 399 | Protein_2810 | integrase core domain-containing protein | - |
| LGL90_RS14505 (LGL90_14535) | 3178599..3178885 | - | 287 | Protein_2811 | hypothetical protein | - |
| LGL90_RS14510 (LGL90_14540) | 3178906..3179973 | - | 1068 | WP_038245756.1 | macro domain-containing protein | Antitoxin Detail |
| LGL90_RS14515 (LGL90_14545) | 3179970..3180626 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| LGL90_RS14520 (LGL90_14550) | 3180629..3181204 | - | 576 | WP_234049239.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| LGL90_RS14525 (LGL90_14555) | 3181328..3181717 | - | 390 | WP_234049240.1 | restriction endonuclease subunit S | - |
| LGL90_RS14530 (LGL90_14560) | 3181981..3182271 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGL90_RS14535 (LGL90_14565) | 3182261..3182515 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LGL90_RS14545 (LGL90_14575) | 3183904..3185088 | - | 1185 | WP_234049241.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LGL90_RS14555 (LGL90_14585) | 3185475..3186545 | - | 1071 | WP_038241732.1 | LPS export ABC transporter permease LptG | - |
| LGL90_RS14560 (LGL90_14590) | 3186545..3187639 | - | 1095 | WP_004720454.1 | LPS export ABC transporter permease LptF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|