MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97267 bp
Accession: NZ_CP084593 Location: 1..97267 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: plasmid unnamed1
Accession: NZ_CP084593 Location: 1..97267 Organism: Mycobacterium intracellulare subsp. chimaera strain 850 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFT51_RS28420 (LFT51_28420) | 1..1515 | + | 1515 | WP_007172337.1 | ESX-5 secretion system protein EccD5 | VF |
| LFT51_RS28425 (LFT51_28425) | 1577..3232 | + | 1656 | WP_225336864.1 | Mycosin-5 | VF |
| LFT51_RS28430 (LFT51_28430) | 3232..4824 | + | 1593 | WP_007172335.1 | ESX-5 secretion system protein EccE5 | VF |
| LFT51_RS28435 (LFT51_28435) | 4847..6679 | + | 1833 | WP_007172334.1 | ESX-5 secretion system protein EccA5 | VF |
| LFT51_RS28440 (LFT51_28440) | 6687..7013 | + | 327 | WP_007172333.1 | hypothetical protein | - |
| LFT51_RS28445 (LFT51_28445) | 7165..7308 | + | 144 | WP_154074434.1 | hypothetical protein | - |
| LFT51_RS28450 (LFT51_28450) | 7701..9410 | - | 1710 | WP_087140134.1 | hypothetical protein | - |
| LFT51_RS28455 (LFT51_28455) | 9407..10699 | - | 1293 | WP_226069300.1 | ATP-binding protein | - |
| LFT51_RS28460 (LFT51_28460) | 10911..12014 | - | 1104 | WP_226069237.1 | integrase core domain-containing protein | - |
| LFT51_RS28465 (LFT51_28465) | 12005..12337 | - | 333 | WP_051445766.1 | helix-turn-helix domain-containing protein | - |
| LFT51_RS28470 (LFT51_28470) | 12409..13968 | - | 1560 | WP_226069301.1 | hypothetical protein | - |
| LFT51_RS28475 (LFT51_28475) | 14042..14299 | - | 258 | WP_225336863.1 | glycosyl transferase family 39 | - |
| LFT51_RS28480 (LFT51_28480) | 14347..14595 | - | 249 | WP_007172328.1 | hypothetical protein | - |
| LFT51_RS28485 (LFT51_28485) | 14621..14848 | - | 228 | WP_007172327.1 | hypothetical protein | - |
| LFT51_RS28490 (LFT51_28490) | 14862..15788 | - | 927 | WP_007172326.1 | conjugal transfer protein | - |
| LFT51_RS28495 (LFT51_28495) | 15805..17019 | - | 1215 | WP_007172325.1 | hypothetical protein | - |
| LFT51_RS28500 (LFT51_28500) | 17016..17321 | - | 306 | WP_007172324.1 | hypothetical protein | - |
| LFT51_RS28505 (LFT51_28505) | 17420..17854 | + | 435 | WP_007172323.1 | hypothetical protein | - |
| LFT51_RS28510 (LFT51_28510) | 17838..18503 | + | 666 | WP_040624365.1 | hypothetical protein | - |
| LFT51_RS28515 (LFT51_28515) | 18506..19909 | + | 1404 | WP_007172321.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LFT51_RS28520 (LFT51_28520) | 19906..20172 | + | 267 | WP_007172320.1 | hypothetical protein | - |
| LFT51_RS28525 (LFT51_28525) | 20494..21606 | + | 1113 | WP_007172318.1 | HD domain-containing protein | - |
| LFT51_RS28530 (LFT51_28530) | 21753..22169 | + | 417 | WP_139315438.1 | type IV secretion system protein VirD4 | - |
| LFT51_RS28535 (LFT51_28535) | 22162..22311 | + | 150 | WP_007172316.1 | hypothetical protein | - |
| LFT51_RS28540 (LFT51_28540) | 22391..22957 | + | 567 | WP_007172315.1 | hypothetical protein | - |
| LFT51_RS28545 (LFT51_28545) | 23780..24301 | + | 522 | WP_007172312.1 | hypothetical protein | - |
| LFT51_RS28550 (LFT51_28550) | 24369..24956 | + | 588 | WP_007172311.1 | hypothetical protein | - |
| LFT51_RS28555 (LFT51_28555) | 24953..26320 | + | 1368 | WP_023363493.1 | hypothetical protein | - |
| LFT51_RS28560 (LFT51_28560) | 26361..26633 | - | 273 | WP_040624325.1 | hypothetical protein | - |
| LFT51_RS28565 (LFT51_28565) | 26738..32596 | - | 5859 | WP_007172307.1 | Multifunctional conjugation protein TraI | Relaxase |
| LFT51_RS28570 (LFT51_28570) | 32851..33330 | + | 480 | WP_007172306.1 | hypothetical protein | - |
| LFT51_RS28575 (LFT51_28575) | 33419..33943 | + | 525 | WP_007172305.1 | hypothetical protein | - |
| LFT51_RS28580 (LFT51_28580) | 34300..35346 | - | 1047 | WP_007172304.1 | DUF932 domain-containing protein | - |
| LFT51_RS28585 (LFT51_28585) | 35764..36300 | - | 537 | WP_007172303.1 | hypothetical protein | - |
| LFT51_RS28590 (LFT51_28590) | 36397..36741 | - | 345 | WP_007172302.1 | hypothetical protein | - |
| LFT51_RS28595 (LFT51_28595) | 37159..38106 | - | 948 | WP_007172301.1 | DUF4192 domain-containing protein | - |
| LFT51_RS28600 (LFT51_28600) | 38528..38701 | - | 174 | WP_007172699.1 | hypothetical protein | - |
| LFT51_RS28605 (LFT51_28605) | 38736..39194 | - | 459 | WP_023363543.1 | hypothetical protein | - |
| LFT51_RS28610 (LFT51_28610) | 39615..39917 | - | 303 | WP_040624393.1 | hypothetical protein | - |
| LFT51_RS28615 (LFT51_28615) | 40000..40461 | - | 462 | WP_023363541.1 | hypothetical protein | - |
| LFT51_RS28620 (LFT51_28620) | 40883..41860 | - | 978 | WP_007172422.1 | DUF3560 domain-containing protein | - |
| LFT51_RS28625 (LFT51_28625) | 41981..42217 | - | 237 | WP_007172423.1 | hypothetical protein | - |
| LFT51_RS28630 (LFT51_28630) | 42766..43179 | - | 414 | WP_023363536.1 | hypothetical protein | - |
| LFT51_RS28635 (LFT51_28635) | 43209..43604 | - | 396 | WP_007172420.1 | hypothetical protein | - |
| LFT51_RS28640 (LFT51_28640) | 44012..44551 | - | 540 | WP_007172419.1 | hypothetical protein | - |
| LFT51_RS28645 (LFT51_28645) | 44890..45048 | + | 159 | WP_023363534.1 | hypothetical protein | - |
| LFT51_RS28650 (LFT51_28650) | 45024..45740 | - | 717 | WP_007172417.1 | hypothetical protein | - |
| LFT51_RS28655 (LFT51_28655) | 45764..45934 | - | 171 | WP_007172416.1 | hypothetical protein | - |
| LFT51_RS28660 (LFT51_28660) | 45931..47217 | - | 1287 | WP_007172415.1 | toprim domain-containing protein | - |
| LFT51_RS28665 (LFT51_28665) | 47217..47510 | - | 294 | WP_007172414.1 | hypothetical protein | - |
| LFT51_RS28670 (LFT51_28670) | 47544..47777 | - | 234 | WP_007172413.1 | glutaredoxin-like protein NrdH | - |
| LFT51_RS28675 (LFT51_28675) | 48541..50187 | - | 1647 | WP_007172412.1 | ParB/RepB/Spo0J family partition protein | - |
| LFT51_RS28680 (LFT51_28680) | 50764..50976 | - | 213 | WP_007172410.1 | hypothetical protein | - |
| LFT51_RS28685 (LFT51_28685) | 51095..52195 | - | 1101 | WP_007172409.1 | tyrosine-type recombinase/integrase | - |
| LFT51_RS28690 (LFT51_28690) | 52185..52754 | - | 570 | WP_007172408.1 | hypothetical protein | - |
| LFT51_RS28695 (LFT51_28695) | 53373..54464 | + | 1092 | WP_007172407.1 | hypothetical protein | - |
| LFT51_RS28700 (LFT51_28700) | 54481..54774 | + | 294 | WP_007172406.1 | hypothetical protein | - |
| LFT51_RS28705 (LFT51_28705) | 54989..55246 | - | 258 | WP_007172405.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LFT51_RS28710 (LFT51_28710) | 55243..55527 | - | 285 | WP_007172404.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LFT51_RS28715 (LFT51_28715) | 55609..56370 | - | 762 | WP_023363524.1 | hypothetical protein | - |
| LFT51_RS28720 (LFT51_28720) | 56373..57095 | - | 723 | WP_139315444.1 | ParA family protein | - |
| LFT51_RS28725 (LFT51_28725) | 57792..58652 | + | 861 | WP_023363522.1 | DUF2637 domain-containing protein | - |
| LFT51_RS29550 | 58874..60394 | + | 1521 | WP_007172379.1 | DUF4226 domain-containing protein | - |
| LFT51_RS28735 (LFT51_28735) | 60422..60736 | + | 315 | WP_041321561.1 | hypothetical protein | - |
| LFT51_RS28740 (LFT51_28740) | 60812..61117 | + | 306 | WP_007172377.1 | type VII secretion target | - |
| LFT51_RS29555 | 61134..62840 | + | 1707 | WP_023363520.1 | PPE domain-containing protein | - |
| LFT51_RS28750 (LFT51_28750) | 62837..63178 | + | 342 | WP_007172375.1 | hypothetical protein | - |
| LFT51_RS28755 (LFT51_28755) | 63291..64502 | - | 1212 | WP_023363518.1 | hypothetical protein | - |
| LFT51_RS28760 (LFT51_28760) | 64864..65280 | - | 417 | WP_007172373.1 | hypothetical protein | - |
| LFT51_RS28765 (LFT51_28765) | 65441..67303 | - | 1863 | WP_023363516.1 | helicase associated domain-containing protein | - |
| LFT51_RS28770 (LFT51_28770) | 67680..67964 | - | 285 | WP_007172369.1 | hypothetical protein | - |
| LFT51_RS28775 (LFT51_28775) | 67927..68517 | - | 591 | WP_023363514.1 | hypothetical protein | - |
| LFT51_RS28780 (LFT51_28780) | 68573..69010 | - | 438 | WP_007172368.1 | WhiB family transcriptional regulator | - |
| LFT51_RS28785 (LFT51_28785) | 69317..69823 | + | 507 | WP_007172367.1 | helix-turn-helix transcriptional regulator | - |
| LFT51_RS28790 (LFT51_28790) | 69929..70180 | + | 252 | WP_040624378.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| LFT51_RS28795 (LFT51_28795) | 70177..70470 | + | 294 | WP_007172365.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LFT51_RS28800 (LFT51_28800) | 70688..71395 | + | 708 | WP_139315443.1 | hypothetical protein | - |
| LFT51_RS28805 (LFT51_28805) | 71409..72107 | + | 699 | WP_139315442.1 | hypothetical protein | - |
| LFT51_RS28810 (LFT51_28810) | 72222..73301 | + | 1080 | WP_007172361.1 | DUF6036 family nucleotidyltransferase | - |
| LFT51_RS28815 (LFT51_28815) | 73411..74082 | + | 672 | WP_139315441.1 | hypothetical protein | - |
| LFT51_RS28820 (LFT51_28820) | 74206..74478 | + | 273 | WP_139315440.1 | hypothetical protein | - |
| LFT51_RS28825 (LFT51_28825) | 74709..75140 | + | 432 | WP_139315439.1 | hypothetical protein | - |
| LFT51_RS28830 (LFT51_28830) | 75150..77474 | + | 2325 | WP_007172355.1 | hypothetical protein | - |
| LFT51_RS28835 (LFT51_28835) | 77471..78193 | + | 723 | WP_023363510.1 | hypothetical protein | - |
| LFT51_RS28840 (LFT51_28840) | 78270..78408 | - | 139 | Protein_85 | type II toxin-antitoxin system VapC family toxin | - |
| LFT51_RS28845 (LFT51_28845) | 78514..80166 | - | 1653 | WP_040624340.1 | IS607 family transposase IS1535 | Transposase |
| LFT51_RS28850 (LFT51_28850) | 80166..80747 | - | 582 | WP_007172352.1 | IS607 family transposase IS1535 | Transposase |
| LFT51_RS28855 (LFT51_28855) | 80890..82221 | + | 1332 | WP_023363507.1 | IS256 family transposase IS2606 | Transposase |
| LFT51_RS28860 (LFT51_28860) | 82503..82919 | - | 417 | WP_040624374.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFT51_RS28865 (LFT51_28865) | 82922..83185 | - | 264 | WP_007172349.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LFT51_RS28870 (LFT51_28870) | 83398..84261 | + | 864 | WP_142383462.1 | hypothetical protein | - |
| LFT51_RS28875 (LFT51_28875) | 84685..85428 | + | 744 | WP_225336958.1 | hypothetical protein | - |
| LFT51_RS28880 (LFT51_28880) | 85514..86554 | + | 1041 | WP_023363502.1 | Murein DD-endopeptidase MepH | VF |
| LFT51_RS28885 (LFT51_28885) | 86578..88113 | + | 1536 | WP_225336956.1 | ESX-5 secretion system ATPase EccB5 | VF |
| LFT51_RS28890 (LFT51_28890) | 88110..92336 | + | 4227 | WP_007172344.1 | ESX-5 secretion system protein EccC5 | VF |
| LFT51_RS28895 (LFT51_28895) | 92430..92726 | + | 297 | WP_007172343.1 | PE family protein | - |
| LFT51_RS28900 (LFT51_28900) | 92756..93910 | + | 1155 | WP_007172342.1 | putative PPE family protein PPE51 | VF |
| LFT51_RS28905 (LFT51_28905) | 94054..94350 | + | 297 | WP_007172341.1 | WXG100 family type VII secretion target | - |
| LFT51_RS28910 (LFT51_28910) | 94395..94679 | + | 285 | WP_007172340.1 | ESAT-6-like protein EsxN | VF |
| LFT51_RS28915 (LFT51_28915) | 94758..95678 | + | 921 | WP_007172339.1 | ESX-5 secretion-associated protein EspG5 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|