MGE detailed information
MGE type: Conjugative plasmid MGE length: 102134 bp
Accession: NZ_CP083264 Location: 1..102134 Organism: Escherichia coli strain JNU Replicon: plasmid p1
Accession: NZ_CP083264 Location: 1..102134 Organism: Escherichia coli strain JNU Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6T58_RS23560 (1) | 1..858 | + | 858 | WP_000774302.1 | incFII family plasmid replication initiator RepA | - |
K6T58_RS23565 (1715) | 1715..2728 | - | 1014 | WP_000109841.1 | sulfite reductase subunit C | - |
K6T58_RS23570 (2739) | 2739..3557 | - | 819 | WP_024199078.1 | anaerobic sulfite reductase subunit AsrB | - |
K6T58_RS23575 (3561) | 3561..4604 | - | 1044 | WP_000279211.1 | anaerobic sulfite reductase subunit AsrA | - |
K6T58_RS23580 (5316) | 5316..6074 | - | 759 | WP_000593837.1 | retron system putative HNH endonuclease | - |
K6T58_RS23585 (6071) | 6071..7303 | - | 1233 | WP_000582826.1 | AAA family ATPase | - |
K6T58_RS23590 (8233) | 8233..8445 | - | 213 | WP_000064130.1 | hypothetical protein | - |
K6T58_RS23595 (8953) | 8953..9570 | - | 618 | WP_000521605.1 | ProQ/FINO family protein | - |
K6T58_RS23600 (9765) | 9765..11321 | - | 1557 | WP_000818360.1 | AAA family ATPase | - |
K6T58_RS23605 (11586) | 11586..12176 | - | 591 | WP_000194578.1 | hypothetical protein | - |
K6T58_RS23610 (12176) | 12176..12433 | - | 258 | WP_000371891.1 | hypothetical protein | - |
K6T58_RS23615 (12787) | 12787..14925 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
K6T58_RS23620 (15087) | 15087..15503 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
K6T58_RS23625 (15500) | 15500..15730 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
K6T58_RS23630 (16026) | 16026..16316 | + | 291 | WP_000111771.1 | hypothetical protein | - |
K6T58_RS23635 (16306) | 16306..17205 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
K6T58_RS23640 (17255) | 17255..19480 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
K6T58_RS23645 (19592) | 19592..20764 | + | 1173 | WP_000952375.1 | IS21 family transposase IS21 | Transposase |
K6T58_RS23650 (20764) | 20764..21561 | + | 798 | WP_000544799.1 | IS21 family transposase IS21 | Transposase |
K6T58_RS23655 (21601) | 21601..22693 | - | 1093 | Protein_20 | IS91 family transposase ISEc37 | Transposase |
K6T58_RS23660 (22656) | 22656..22988 | - | 333 | WP_032314074.1 | hypothetical protein | - |
K6T58_RS23665 (23446) | 23446..24507 | - | 1062 | WP_047650192.1 | EAL domain-containing protein | - |
K6T58_RS23670 (24617) | 24617..25030 | - | 414 | WP_001351580.1 | hypothetical protein | - |
K6T58_RS23675 (25194) | 25194..25589 | - | 396 | WP_000491615.1 | polymer-forming cytoskeletal protein | - |
K6T58_RS23680 (25764) | 25764..26177 | - | 414 | WP_000483319.1 | hypothetical protein | - |
K6T58_RS23685 (26780) | 26780..26968 | - | 189 | WP_000131420.1 | hypothetical protein | - |
K6T58_RS23690 (27643) | 27643..27840 | + | 198 | Protein_27 | IS66 family transposase ISCro1 | Transposase |
K6T58_RS23695 (27832) | 27832..29262 | + | 1431 | Protein_28 | IS66 family transposase | - |
K6T58_RS23700 (29323) | 29323..29676 | + | 354 | Protein_29 | IS3 family transposase | - |
K6T58_RS23705 (30216) | 30216..30908 | - | 693 | WP_000286435.1 | hypothetical protein | - |
K6T58_RS23710 (31657) | 31657..36594 | - | 4938 | WP_097492006.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
K6T58_RS23715 (37229) | 37229..39754 | - | 2526 | WP_223675884.1 | Outer membrane protein IcsA autotransporter | VF |
K6T58_RS23720 (40139) | 40139..40258 | + | 120 | Protein_33 | transposase | - |
K6T58_RS23725 (40359) | 40359..41349 | - | 991 | Protein_34 | IS3 family transposase | - |
K6T58_RS23730 (41416) | 41416..42397 | + | 982 | Protein_35 | IS110 family transposase | - |
K6T58_RS23735 (42650) | 42650..42754 | - | 105 | WP_001443026.1 | IS3 family transposase IS1351 | Transposase |
K6T58_RS23740 (42782) | 42782..43618 | - | 837 | WP_000222506.1 | Right origin-binding protein | VF |
K6T58_RS23745 (44301) | 44301..45266 | - | 966 | Protein_38 | IS3 family transposase | - |
K6T58_RS23750 (47371) | 47371..47589 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
K6T58_RS23755 (47591) | 47591..47896 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
K6T58_RS23760 (47897) | 47897..48703 | + | 807 | WP_069892513.1 | site-specific integrase | - |
K6T58_RS23765 (49697) | 49697..50863 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
K6T58_RS23770 (50863) | 50863..51834 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
K6T58_RS23775 (52744) | 52744..53645 | + | 902 | Protein_44 | DUF1281 domain-containing protein | - |
K6T58_RS23780 (53649) | 53649..53954 | + | 306 | WP_010892536.1 | hypothetical protein | - |
K6T58_RS23785 (54031) | 54031..54714 | + | 684 | WP_000085939.1 | DNA methylase | - |
K6T58_RS23790 (54715) | 54715..54936 | + | 222 | WP_001104904.1 | hypothetical protein | - |
K6T58_RS23795 (54830) | 54830..55384 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
K6T58_RS23800 (55430) | 55430..56206 | + | 777 | WP_001005032.1 | hypothetical protein | - |
K6T58_RS23805 (56620) | 56620..57045 | + | 426 | WP_001198920.1 | antirestriction protein | - |
K6T58_RS23810 (57092) | 57092..57514 | + | 423 | WP_089521800.1 | DUF1380 family protein | - |
K6T58_RS23815 (57511) | 57511..57702 | + | 192 | WP_001027495.1 | hypothetical protein | - |
K6T58_RS23820 (58490) | 58490..59029 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
K6T58_RS23825 (59086) | 59086..59319 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
K6T58_RS23830 (59385) | 59385..61343 | + | 1959 | WP_000117171.1 | ParB/RepB/Spo0J family partition protein | - |
K6T58_RS23835 (61398) | 61398..61832 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
K6T58_RS23840 (61829) | 61829..62591 | + | 763 | Protein_57 | plasmid SOS inhibition protein A | - |
- (62560) | 62560..62758 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (62560) | 62560..62758 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (62560) | 62560..62758 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (62560) | 62560..62758 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
K6T58_RS23845 (62765) | 62765..62914 | + | 150 | Protein_58 | DUF5431 family protein | - |
K6T58_RS23850 (62856) | 62856..62981 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
K6T58_RS23855 (63282) | 63282..63578 | - | 297 | Protein_60 | hypothetical protein | - |
K6T58_RS23860 (63648) | 63648..63854 | + | 207 | WP_000547963.1 | hypothetical protein | - |
K6T58_RS23865 (63879) | 63879..64166 | + | 288 | WP_000107542.1 | hypothetical protein | - |
K6T58_RS23870 (64285) | 64285..65106 | + | 822 | WP_001234474.1 | DUF932 domain-containing protein | - |
K6T58_RS23875 (65401) | 65401..65991 | - | 591 | WP_001375132.1 | hypothetical protein | VF |
K6T58_RS23880 (66324) | 66324..66707 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
K6T58_RS23885 (66894) | 66894..67583 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
K6T58_RS23890 (67676) | 67676..68077 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
K6T58_RS23895 (68110) | 68110..68475 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
K6T58_RS23900 (68490) | 68490..68801 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
K6T58_RS23905 (68823) | 68823..69389 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
K6T58_RS23910 (69376) | 69376..70104 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
K6T58_RS23915 (70104) | 70104..71531 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
K6T58_RS23920 (71521) | 71521..72111 | + | 591 | WP_000002792.1 | conjugal transfer pilus-stabilizing protein TraP | - |
K6T58_RS23925 (72098) | 72098..72295 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
K6T58_RS23930 (72307) | 72307..72558 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
K6T58_RS23935 (72555) | 72555..73070 | + | 516 | WP_000809843.1 | type IV conjugative transfer system lipoprotein TraV | - |
K6T58_RS23940 (73205) | 73205..73426 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
K6T58_RS23945 (73586) | 73586..76213 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
K6T58_RS23950 (76210) | 76210..76596 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
K6T58_RS23955 (76593) | 76593..77225 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
K6T58_RS23960 (77222) | 77222..78214 | + | 993 | WP_000830185.1 | conjugal transfer pilus assembly protein TraU | - |
K6T58_RS23965 (78223) | 78223..78861 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
K6T58_RS23970 (78858) | 78858..80666 | + | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
K6T58_RS23975 (80693) | 80693..80950 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
K6T58_RS23980 (80943) | 80943..81686 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
K6T58_RS23985 (81702) | 81702..82049 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
K6T58_RS23990 (82051) | 82051..82365 | - | 315 | WP_089537750.1 | toxin ArtA | - |
K6T58_RS23995 (82446) | 82446..82730 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
K6T58_RS24000 (82717) | 82717..83262 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
K6T58_RS24005 (83192) | 83192..83533 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
K6T58_RS24010 (83520) | 83520..83900 | + | 381 | WP_001366201.1 | F-type conjugal transfer protein TrbF | - |
K6T58_RS24015 (83900) | 83900..85273 | + | 1374 | WP_021553026.1 | conjugal transfer pilus assembly protein TraH | - |
K6T58_RS24020 (85270) | 85270..88086 | + | 2817 | WP_001007055.1 | conjugal transfer mating-pair stabilization protein TraG | - |
K6T58_RS24025 (88119) | 88119..88640 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
K6T58_RS24030 (88665) | 88665..89396 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
K6T58_RS24035 (89649) | 89649..91802 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
K6T58_RS24040 (91811) | 91811..92209 | - | 399 | WP_000911324.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
K6T58_RS24045 (92209) | 92209..92436 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
K6T58_RS24050 (92518) | 92518..97788 | + | 5271 | WP_089522406.1 | Multifunctional conjugation protein TraI | Relaxase |
K6T58_RS24055 (97808) | 97808..98554 | + | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
K6T58_RS24060 (98609) | 98609..99169 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
K6T58_RS24065 (99304) | 99304..99492 | + | 189 | WP_001490801.1 | hypothetical protein | - |
K6T58_RS24070 (99690) | 99690..99776 | + | 87 | Protein_103 | endonuclease | - |
K6T58_RS24075 (99957) | 99957..100268 | - | 312 | WP_000802277.1 | hypothetical protein | - |
- (100564) | 100564..100625 | - | 62 | NuclAT_1 | - | - |
- (100564) | 100564..100625 | - | 62 | NuclAT_1 | - | - |
- (100564) | 100564..100625 | - | 62 | NuclAT_1 | - | - |
- (100564) | 100564..100625 | - | 62 | NuclAT_1 | - | - |
K6T58_RS24080 (100669) | 100669..100818 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
K6T58_RS24085 (101102) | 101102..101359 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
K6T58_RS24090 (101593) | 101593..101667 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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