NZ_CP0832641..102134

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 102134 bp
Accession: NZ_CP083264        Location: 1..102134         Organism: Escherichia coli strain JNU       Replicon: plasmid p1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K6T58_RS23560 (1) 1..858 + 858 WP_000774302.1 incFII family plasmid replication initiator RepA -
K6T58_RS23565 (1715) 1715..2728 - 1014 WP_000109841.1 sulfite reductase subunit C -
K6T58_RS23570 (2739) 2739..3557 - 819 WP_024199078.1 anaerobic sulfite reductase subunit AsrB -
K6T58_RS23575 (3561) 3561..4604 - 1044 WP_000279211.1 anaerobic sulfite reductase subunit AsrA -
K6T58_RS23580 (5316) 5316..6074 - 759 WP_000593837.1 retron system putative HNH endonuclease -
K6T58_RS23585 (6071) 6071..7303 - 1233 WP_000582826.1 AAA family ATPase -
K6T58_RS23590 (8233) 8233..8445 - 213 WP_000064130.1 hypothetical protein -
K6T58_RS23595 (8953) 8953..9570 - 618 WP_000521605.1 ProQ/FINO family protein -
K6T58_RS23600 (9765) 9765..11321 - 1557 WP_000818360.1 AAA family ATPase -
K6T58_RS23605 (11586) 11586..12176 - 591 WP_000194578.1 hypothetical protein -
K6T58_RS23610 (12176) 12176..12433 - 258 WP_000371891.1 hypothetical protein -
K6T58_RS23615 (12787) 12787..14925 + 2139 WP_000350638.1 AAA family ATPase -
K6T58_RS23620 (15087) 15087..15503 - 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K6T58_RS23625 (15500) 15500..15730 - 231 WP_001261287.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
K6T58_RS23630 (16026) 16026..16316 + 291 WP_000111771.1 hypothetical protein -
K6T58_RS23635 (16306) 16306..17205 + 900 WP_000963206.1 nucleotide-binding protein -
K6T58_RS23640 (17255) 17255..19480 - 2226 WP_000698737.1 P-loop NTPase fold protein -
K6T58_RS23645 (19592) 19592..20764 + 1173 WP_000952375.1 IS21 family transposase IS21 Transposase
K6T58_RS23650 (20764) 20764..21561 + 798 WP_000544799.1 IS21 family transposase IS21 Transposase
K6T58_RS23655 (21601) 21601..22693 - 1093 Protein_20 IS91 family transposase ISEc37 Transposase
K6T58_RS23660 (22656) 22656..22988 - 333 WP_032314074.1 hypothetical protein -
K6T58_RS23665 (23446) 23446..24507 - 1062 WP_047650192.1 EAL domain-containing protein -
K6T58_RS23670 (24617) 24617..25030 - 414 WP_001351580.1 hypothetical protein -
K6T58_RS23675 (25194) 25194..25589 - 396 WP_000491615.1 polymer-forming cytoskeletal protein -
K6T58_RS23680 (25764) 25764..26177 - 414 WP_000483319.1 hypothetical protein -
K6T58_RS23685 (26780) 26780..26968 - 189 WP_000131420.1 hypothetical protein -
K6T58_RS23690 (27643) 27643..27840 + 198 Protein_27 IS66 family transposase ISCro1 Transposase
K6T58_RS23695 (27832) 27832..29262 + 1431 Protein_28 IS66 family transposase -
K6T58_RS23700 (29323) 29323..29676 + 354 Protein_29 IS3 family transposase -
K6T58_RS23705 (30216) 30216..30908 - 693 WP_000286435.1 hypothetical protein -
K6T58_RS23710 (31657) 31657..36594 - 4938 WP_097492006.1 autotransporter outer membrane beta-barrel domain-containing protein -
K6T58_RS23715 (37229) 37229..39754 - 2526 WP_223675884.1 Outer membrane protein IcsA autotransporter VF
K6T58_RS23720 (40139) 40139..40258 + 120 Protein_33 transposase -
K6T58_RS23725 (40359) 40359..41349 - 991 Protein_34 IS3 family transposase -
K6T58_RS23730 (41416) 41416..42397 + 982 Protein_35 IS110 family transposase -
K6T58_RS23735 (42650) 42650..42754 - 105 WP_001443026.1 IS3 family transposase IS1351 Transposase
K6T58_RS23740 (42782) 42782..43618 - 837 WP_000222506.1 Right origin-binding protein VF
K6T58_RS23745 (44301) 44301..45266 - 966 Protein_38 IS3 family transposase -
K6T58_RS23750 (47371) 47371..47589 + 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
K6T58_RS23755 (47591) 47591..47896 + 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
K6T58_RS23760 (47897) 47897..48703 + 807 WP_069892513.1 site-specific integrase -
K6T58_RS23765 (49697) 49697..50863 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
K6T58_RS23770 (50863) 50863..51834 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
K6T58_RS23775 (52744) 52744..53645 + 902 Protein_44 DUF1281 domain-containing protein -
K6T58_RS23780 (53649) 53649..53954 + 306 WP_010892536.1 hypothetical protein -
K6T58_RS23785 (54031) 54031..54714 + 684 WP_000085939.1 DNA methylase -
K6T58_RS23790 (54715) 54715..54936 + 222 WP_001104904.1 hypothetical protein -
K6T58_RS23795 (54830) 54830..55384 + 555 WP_001358893.1 DUF1380 family protein -
K6T58_RS23800 (55430) 55430..56206 + 777 WP_001005032.1 hypothetical protein -
K6T58_RS23805 (56620) 56620..57045 + 426 WP_001198920.1 antirestriction protein -
K6T58_RS23810 (57092) 57092..57514 + 423 WP_089521800.1 DUF1380 family protein -
K6T58_RS23815 (57511) 57511..57702 + 192 WP_001027495.1 hypothetical protein -
K6T58_RS23820 (58490) 58490..59029 + 540 WP_000290801.1 single-stranded DNA-binding protein -
K6T58_RS23825 (59086) 59086..59319 + 234 WP_000005990.1 DUF905 family protein -
K6T58_RS23830 (59385) 59385..61343 + 1959 WP_000117171.1 ParB/RepB/Spo0J family partition protein -
K6T58_RS23835 (61398) 61398..61832 + 435 WP_000845928.1 conjugation system SOS inhibitor PsiB -
K6T58_RS23840 (61829) 61829..62591 + 763 Protein_57 plasmid SOS inhibition protein A -
- (62560) 62560..62758 + 199 NuclAT_0 - Antitoxin Detail
- (62560) 62560..62758 + 199 NuclAT_0 - Antitoxin Detail
- (62560) 62560..62758 + 199 NuclAT_0 - Antitoxin Detail
- (62560) 62560..62758 + 199 NuclAT_0 - Antitoxin Detail
K6T58_RS23845 (62765) 62765..62914 + 150 Protein_58 DUF5431 family protein -
K6T58_RS23850 (62856) 62856..62981 + 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
K6T58_RS23855 (63282) 63282..63578 - 297 Protein_60 hypothetical protein -
K6T58_RS23860 (63648) 63648..63854 + 207 WP_000547963.1 hypothetical protein -
K6T58_RS23865 (63879) 63879..64166 + 288 WP_000107542.1 hypothetical protein -
K6T58_RS23870 (64285) 64285..65106 + 822 WP_001234474.1 DUF932 domain-containing protein -
K6T58_RS23875 (65401) 65401..65991 - 591 WP_001375132.1 hypothetical protein VF
K6T58_RS23880 (66324) 66324..66707 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
K6T58_RS23885 (66894) 66894..67583 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
K6T58_RS23890 (67676) 67676..68077 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
K6T58_RS23895 (68110) 68110..68475 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
K6T58_RS23900 (68490) 68490..68801 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
K6T58_RS23905 (68823) 68823..69389 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
K6T58_RS23910 (69376) 69376..70104 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
K6T58_RS23915 (70104) 70104..71531 + 1428 WP_000146685.1 F-type conjugal transfer pilus assembly protein TraB -
K6T58_RS23920 (71521) 71521..72111 + 591 WP_000002792.1 conjugal transfer pilus-stabilizing protein TraP -
K6T58_RS23925 (72098) 72098..72295 + 198 WP_001324648.1 conjugal transfer protein TrbD -
K6T58_RS23930 (72307) 72307..72558 + 252 WP_001038342.1 conjugal transfer protein TrbG -
K6T58_RS23935 (72555) 72555..73070 + 516 WP_000809843.1 type IV conjugative transfer system lipoprotein TraV -
K6T58_RS23940 (73205) 73205..73426 + 222 WP_001278689.1 conjugal transfer protein TraR -
K6T58_RS23945 (73586) 73586..76213 + 2628 WP_001064245.1 type IV secretion system protein TraC -
K6T58_RS23950 (76210) 76210..76596 + 387 WP_000099690.1 type-F conjugative transfer system protein TrbI -
K6T58_RS23955 (76593) 76593..77225 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
K6T58_RS23960 (77222) 77222..78214 + 993 WP_000830185.1 conjugal transfer pilus assembly protein TraU -
K6T58_RS23965 (78223) 78223..78861 + 639 WP_000777688.1 type-F conjugative transfer system pilin assembly protein TrbC -
K6T58_RS23970 (78858) 78858..80666 + 1809 WP_000821838.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
K6T58_RS23975 (80693) 80693..80950 + 258 WP_000864318.1 conjugal transfer protein TrbE -
K6T58_RS23980 (80943) 80943..81686 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
K6T58_RS23985 (81702) 81702..82049 + 348 WP_001287913.1 conjugal transfer protein TrbA -
K6T58_RS23990 (82051) 82051..82365 - 315 WP_089537750.1 toxin ArtA -
K6T58_RS23995 (82446) 82446..82730 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
K6T58_RS24000 (82717) 82717..83262 + 546 WP_000059850.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
K6T58_RS24005 (83192) 83192..83533 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
K6T58_RS24010 (83520) 83520..83900 + 381 WP_001366201.1 F-type conjugal transfer protein TrbF -
K6T58_RS24015 (83900) 83900..85273 + 1374 WP_021553026.1 conjugal transfer pilus assembly protein TraH -
K6T58_RS24020 (85270) 85270..88086 + 2817 WP_001007055.1 conjugal transfer mating-pair stabilization protein TraG -
K6T58_RS24025 (88119) 88119..88640 + 522 WP_000632670.1 conjugal transfer entry exclusion protein TraS -
K6T58_RS24030 (88665) 88665..89396 + 732 WP_000850422.1 conjugal transfer complement resistance protein TraT -
K6T58_RS24035 (89649) 89649..91802 + 2154 WP_000009350.1 type IV conjugative transfer system coupling protein TraD -
K6T58_RS24040 (91811) 91811..92209 - 399 WP_000911324.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
K6T58_RS24045 (92209) 92209..92436 - 228 WP_000450532.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
K6T58_RS24050 (92518) 92518..97788 + 5271 WP_089522406.1 Multifunctional conjugation protein TraI Relaxase
K6T58_RS24055 (97808) 97808..98554 + 747 WP_000205776.1 conjugal transfer pilus acetylase TraX -
K6T58_RS24060 (98609) 98609..99169 + 561 WP_000139310.1 fertility inhibition protein FinO -
K6T58_RS24065 (99304) 99304..99492 + 189 WP_001490801.1 hypothetical protein -
K6T58_RS24070 (99690) 99690..99776 + 87 Protein_103 endonuclease -
K6T58_RS24075 (99957) 99957..100268 - 312 WP_000802277.1 hypothetical protein -
- (100564) 100564..100625 - 62 NuclAT_1 - -
- (100564) 100564..100625 - 62 NuclAT_1 - -
- (100564) 100564..100625 - 62 NuclAT_1 - -
- (100564) 100564..100625 - 62 NuclAT_1 - -
K6T58_RS24080 (100669) 100669..100818 + 150 WP_001312851.1 Hok/Gef family protein -
K6T58_RS24085 (101102) 101102..101359 + 258 WP_000083834.1 replication regulatory protein RepA -
K6T58_RS24090 (101593) 101593..101667 + 75 WP_001442103.1 RepA leader peptide Tap -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance