MGE detailed information
MGE type: Genomic_island MGE length: 11204 bp
Accession: NZ_CP082961 Location: 2643831..2655034 Organism: Lacticaseibacillus rhamnosus strain CAU 1365 Replicon: chromosome
Accession: NZ_CP082961 Location: 2643831..2655034 Organism: Lacticaseibacillus rhamnosus strain CAU 1365 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6087_RS13960 | 2639703..2639834 | - | 132 | WP_005714982.1 | hypothetical protein | - |
| K6087_RS12110 (K6087_12085) | 2639920..2640486 | - | 567 | WP_005691618.1 | TetR/AcrR family transcriptional regulator | - |
| K6087_RS12115 (K6087_12090) | 2640576..2640944 | - | 369 | WP_005686376.1 | dihydroxyacetone kinase phosphoryl donor subunit DhaM | - |
| K6087_RS12120 (K6087_12095) | 2641093..2641674 | - | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit DhaL | - |
| K6087_RS12125 (K6087_12100) | 2641661..2642680 | - | 1020 | WP_019728427.1 | dihydroxyacetone kinase subunit DhaK | - |
| K6087_RS12130 (K6087_12105) | 2642873..2643301 | - | 429 | WP_005691626.1 | OsmC family protein | - |
| K6087_RS12135 (K6087_12110) | 2643831..2644520 | + | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| K6087_RS12140 (K6087_12115) | 2645012..2645620 | - | 609 | WP_005691630.1 | hypothetical protein | - |
| K6087_RS12145 (K6087_12120) | 2646067..2646942 | + | 876 | WP_025014074.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| K6087_RS12150 (K6087_12125) | 2647185..2648600 | - | 1416 | WP_005691634.1 | exonuclease domain-containing protein | - |
| K6087_RS12155 (K6087_12130) | 2648824..2649009 | - | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| K6087_RS12160 (K6087_12135) | 2649037..2649309 | - | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| K6087_RS12165 (K6087_12140) | 2649871..2650119 | + | 249 | WP_005691639.1 | hypothetical protein | - |
| K6087_RS12170 (K6087_12145) | 2650362..2650655 | + | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| K6087_RS12175 (K6087_12150) | 2650737..2651900 | + | 1164 | WP_005691640.1 | MFS transporter | - |
| K6087_RS12180 (K6087_12155) | 2652054..2652629 | + | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| K6087_RS12185 (K6087_12160) | 2652772..2653368 | + | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| K6087_RS12190 (K6087_12165) | 2653403..2654584 | + | 1182 | WP_014571132.1 | RNA-guided endonuclease TnpB family protein | - |
| K6087_RS12195 (K6087_12170) | 2654816..2655034 | + | 219 | WP_005691646.1 | hypothetical protein | - |
| K6087_RS12200 (K6087_12175) | 2655294..2656709 | + | 1416 | WP_019728464.1 | IS5-like element ISLrh2 family transposase | - |
| K6087_RS12205 (K6087_12180) | 2656744..2657625 | - | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| K6087_RS12210 (K6087_12185) | 2658214..2659947 | + | 1734 | WP_005691647.1 | pyruvate oxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.003 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.003 |