MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39262 bp
Accession: NZ_CP082834 Location: 1..39262 Organism: Citrobacter rodentium NBRC 105723 = DSM 16636 Replicon: plasmid pCRTS
Accession: NZ_CP082834 Location: 1..39262 Organism: Citrobacter rodentium NBRC 105723 = DSM 16636 Replicon: plasmid pCRTS
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7R23_RS25520 (K7R23_25330) | 1129..1380 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| K7R23_RS25525 (K7R23_25335) | 1370..1651 | + | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K7R23_RS25530 (K7R23_25340) | 1675..2024 | + | 350 | Protein_2 | DNA-binding protein | - |
| K7R23_RS25535 (K7R23_25345) | 2662..3177 | + | 516 | WP_001025397.1 | J domain-containing protein | - |
| K7R23_RS25540 (K7R23_25350) | 3282..3824 | + | 543 | WP_012908950.1 | hypothetical protein | - |
| K7R23_RS25545 (K7R23_25355) | 3821..4072 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| K7R23_RS25550 (K7R23_25360) | 4059..4286 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| K7R23_RS25555 (K7R23_25365) | 4740..5039 | + | 300 | WP_000650311.1 | hypothetical protein | - |
| K7R23_RS25560 (K7R23_25370) | 5131..5481 | + | 351 | WP_000854261.1 | hypothetical protein | - |
| K7R23_RS25565 (K7R23_25375) | 5787..6035 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| K7R23_RS25570 (K7R23_25380) | 6032..6379 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| K7R23_RS25575 (K7R23_25385) | 6743..7246 | + | 504 | WP_000781818.1 | DNA distortion polypeptide 1 | - |
| K7R23_RS25580 (K7R23_25390) | 7250..8479 | + | 1230 | WP_000539545.1 | hypothetical protein | Relaxase |
| K7R23_RS25585 (K7R23_25395) | 8556..8822 | + | 267 | WP_000160396.1 | hypothetical protein | - |
| K7R23_RS25590 (K7R23_25400) | 8827..9060 | + | 234 | WP_000121162.1 | EexN family lipoprotein | - |
| K7R23_RS25595 (K7R23_25405) | 9498..10118 | + | 621 | WP_012908959.1 | Type IV secretion system protein virB1 | VF |
| K7R23_RS25600 (K7R23_25410) | 10132..10458 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| K7R23_RS25605 (K7R23_25415) | 10477..13224 | + | 2748 | WP_000105979.1 | Type IV secretion system protein virB4 | VF |
| K7R23_RS25610 (K7R23_25420) | 13236..13598 | + | 363 | WP_042623255.1 | type IV secretion system protein | - |
| K7R23_RS25615 (K7R23_25425) | 13640..14608 | - | 969 | WP_012904651.1 | IS5 family transposase IS903B | Transposase |
| K7R23_RS25620 (K7R23_25430) | 14641..15003 | + | 363 | Protein_20 | type IV secretion system protein | - |
| K7R23_RS25625 (K7R23_25435) | 15014..16093 | + | 1080 | WP_000007791.1 | hypothetical protein | VF |
| K7R23_RS25630 (K7R23_25440) | 16608..17294 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| K7R23_RS25635 (K7R23_25445) | 17291..18199 | + | 909 | WP_001299943.1 | Type IV secretion system protein virB9 | VF |
| K7R23_RS25640 (K7R23_25450) | 18192..19310 | + | 1119 | WP_000131267.1 | Type IV secretion system protein virB10 | VF |
| K7R23_RS25645 (K7R23_25455) | 19312..20340 | + | 1029 | WP_000017224.1 | Type IV secretion system protein VirB11 | VF |
| K7R23_RS25650 (K7R23_25460) | 20327..22189 | + | 1863 | WP_000847103.1 | relaxosome-coupling protein TaxB | - |
| K7R23_RS25655 (K7R23_25465) | 22198..22620 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| K7R23_RS25660 (K7R23_25470) | 22604..22909 | + | 306 | WP_001350475.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| K7R23_RS25665 (K7R23_25475) | 23010..24425 | + | 1416 | WP_000869132.1 | YadA-like family protein | - |
| K7R23_RS25670 (K7R23_25480) | 24454..24681 | + | 228 | WP_000803716.1 | hypothetical protein | - |
| K7R23_RS25675 (K7R23_25485) | 24777..25028 | + | 252 | WP_001103395.1 | hypothetical protein | - |
| K7R23_RS25680 (K7R23_25490) | 25100..25534 | + | 435 | WP_012908957.1 | hypothetical protein | - |
| K7R23_RS25685 (K7R23_25495) | 25531..26043 | + | 513 | WP_001221547.1 | thermonuclease family protein | - |
| K7R23_RS25690 (K7R23_25500) | 26322..27074 | + | 753 | WP_000988355.1 | hypothetical protein | - |
| K7R23_RS25695 (K7R23_25505) | 27095..27424 | + | 330 | WP_001330833.1 | hypothetical protein | - |
| K7R23_RS25700 (K7R23_25510) | 27435..28010 | + | 576 | WP_012908955.1 | hypothetical protein | - |
| K7R23_RS25705 (K7R23_25515) | 28015..30168 | + | 2154 | WP_012908954.1 | type IA DNA topoisomerase | - |
| K7R23_RS25710 (K7R23_25520) | 30165..30371 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| K7R23_RS25715 (K7R23_25525) | 30387..30851 | + | 465 | WP_001293133.1 | H-NS family nucleoid-associated regulatory protein | - |
| K7R23_RS25720 (K7R23_25530) | 30955..31611 | + | 657 | WP_001333378.1 | hypothetical protein | - |
| K7R23_RS25725 (K7R23_25535) | 31694..31924 | + | 231 | WP_000175869.1 | hypothetical protein | - |
| K7R23_RS25730 (K7R23_25540) | 31915..32706 | - | 792 | WP_000163250.1 | hypothetical protein | - |
| K7R23_RS25735 (K7R23_25545) | 33145..33624 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| K7R23_RS25740 (K7R23_25550) | 33970..34794 | + | 825 | WP_012908952.1 | Tyrosine recombinase XerD | VF |
| K7R23_RS25745 (K7R23_25555) | 34899..35558 | + | 660 | WP_000516230.1 | hypothetical protein | VF |
| K7R23_RS25750 (K7R23_25560) | 35724..36026 | + | 303 | WP_001062963.1 | hypothetical protein | - |
| K7R23_RS25755 (K7R23_25565) | 36063..36314 | + | 252 | WP_000905714.1 | hypothetical protein | - |
| K7R23_RS25760 (K7R23_25570) | 36886..37413 | - | 528 | WP_000577047.1 | DUF2726 domain-containing protein | - |
| K7R23_RS25765 (K7R23_25575) | 37549..37953 | - | 405 | WP_000654312.1 | hypothetical protein | - |
| K7R23_RS25770 (K7R23_25580) | 38019..39026 | - | 1008 | WP_000243325.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|