MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108070 bp
Accession: NZ_CP082825 Location: 1..108070 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: plasmid unnamed1
Accession: NZ_CP082825 Location: 1..108070 Organism: Escherichia coli strain SCAID URN1-2021 (19/278) Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B79_RS25215 (K8B79_25215) | 101..1123 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| K8B79_RS25220 (K8B79_25220) | 1108..2673 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| K8B79_RS25225 (K8B79_25225) | 2748..3164 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K8B79_RS25230 (K8B79_25230) | 3161..3391 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K8B79_RS25235 (K8B79_25235) | 3772..7566 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| K8B79_RS25240 (K8B79_25240) | 7611..8027 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K8B79_RS25245 (K8B79_25245) | 8024..8254 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K8B79_RS25250 (K8B79_25250) | 8519..9019 | + | 501 | WP_001773886.1 | HEPN family nuclease | - |
| K8B79_RS25255 (K8B79_25255) | 9032..9805 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| K8B79_RS25260 (K8B79_25260) | 9972..11105 | + | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| K8B79_RS25265 (K8B79_25265) | 11139..11651 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| K8B79_RS25270 (K8B79_25270) | 12218..12436 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| K8B79_RS25275 (K8B79_25275) | 12438..12743 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| K8B79_RS25280 (K8B79_25280) | 12744..13550 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| K8B79_RS25285 (K8B79_25285) | 14324..15079 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| K8B79_RS25290 (K8B79_25290) | 15667..16833 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| K8B79_RS25295 (K8B79_25295) | 16833..17804 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| K8B79_RS25300 (K8B79_25300) | 18671..19573 | + | 903 | WP_223092018.1 | DUF1281 domain-containing protein | - |
| K8B79_RS25305 (K8B79_25305) | 19570..19881 | + | 312 | WP_223092019.1 | hypothetical protein | - |
| K8B79_RS25310 (K8B79_25310) | 19958..20641 | + | 684 | WP_223092015.1 | DNA methylase | - |
| K8B79_RS25315 (K8B79_25315) | 20642..20863 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| K8B79_RS25320 (K8B79_25320) | 20793..21311 | + | 519 | WP_225936795.1 | DUF1380 family protein | - |
| K8B79_RS25325 (K8B79_25325) | 21362..22138 | + | 777 | WP_223092020.1 | hypothetical protein | - |
| K8B79_RS25330 (K8B79_25330) | 22555..22980 | + | 426 | WP_225936793.1 | antirestriction protein | - |
| K8B79_RS25335 (K8B79_25335) | 23027..23449 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| K8B79_RS25340 (K8B79_25340) | 23446..23637 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| K8B79_RS25345 (K8B79_25345) | 24672..24902 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K8B79_RS25350 (K8B79_25350) | 24954..26314 | + | 1361 | Protein_27 | DUF3560 domain-containing protein | - |
| K8B79_RS25355 (K8B79_25355) | 26362..26925 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| K8B79_RS25360 (K8B79_25360) | 26951..27157 | + | 207 | WP_001774176.1 | hypothetical protein | - |
| K8B79_RS26610 | 27076..27327 | + | 252 | WP_071579736.1 | hypothetical protein | - |
| K8B79_RS26615 | 27568..27774 | + | 207 | WP_000547975.1 | hypothetical protein | - |
| K8B79_RS25365 (K8B79_25365) | 27800..28339 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| K8B79_RS25370 (K8B79_25370) | 28564..28704 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| K8B79_RS25375 (K8B79_25375) | 28802..29455 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| K8B79_RS25380 (K8B79_25380) | 29548..29805 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| K8B79_RS25385 (K8B79_25385) | 29738..30139 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| K8B79_RS25390 (K8B79_25390) | 30388..31085 | + | 698 | WP_223216377.1 | IS1-like element IS1A family transposase | - |
| K8B79_RS25395 (K8B79_25395) | 31192..31626 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| K8B79_RS25400 (K8B79_25400) | 31698..32048 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| K8B79_RS25405 (K8B79_25405) | 32062..32337 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| K8B79_RS25410 (K8B79_25410) | 32373..32795 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| K8B79_RS25415 (K8B79_25415) | 32847..34541 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| K8B79_RS25420 (K8B79_25420) | 34559..34921 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| K8B79_RS25425 (K8B79_25425) | 34918..35154 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| K8B79_RS25430 (K8B79_25430) | 35190..35858 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| K8B79_RS25435 (K8B79_25435) | 35933..37183 | + | 1251 | Protein_46 | transposase | - |
| K8B79_RS25440 (K8B79_25440) | 37248..37952 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25445 (K8B79_25445) | 38004..38087 | - | 84 | Protein_48 | recombinase family protein | - |
| K8B79_RS25450 (K8B79_25450) | 38213..38563 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| K8B79_RS25455 (K8B79_25455) | 38766..39779 | - | 1014 | WP_000845046.1 | IS91 family transposase ISAzo26 | Transposase |
| K8B79_RS25460 (K8B79_25460) | 39937..40410 | + | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| K8B79_RS25470 (K8B79_25470) | 41208..41300 | + | 93 | Protein_53 | transcriptional regulator | - |
| K8B79_RS25475 (K8B79_25475) | 41278..41901 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| K8B79_RS25480 (K8B79_25480) | 41983..43188 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| K8B79_RS25485 (K8B79_25485) | 43301..43894 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| K8B79_RS25490 (K8B79_25490) | 43982..44398 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| K8B79_RS25495 (K8B79_25495) | 44408..45571 | - | 1164 | Protein_58 | IS4 family transposase IS10R | Transposase |
| K8B79_RS25500 (K8B79_25500) | 45586..45681 | - | 96 | Protein_59 | IS1 family transposase | - |
| K8B79_RS25505 (K8B79_25505) | 45746..46450 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25510 (K8B79_25510) | 46500..47219 | + | 720 | Protein_61 | helicase RepA family protein | - |
| K8B79_RS25515 (K8B79_25515) | 47206..48057 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| K8B79_RS25520 (K8B79_25520) | 48365..49180 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| K8B79_RS25525 (K8B79_25525) | 49241..50044 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| K8B79_RS25530 (K8B79_25530) | 50044..50880 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| K8B79_RS25535 (K8B79_25535) | 50941..51645 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25540 (K8B79_25540) | 51709..52194 | + | 486 | Protein_67 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| K8B79_RS25545 (K8B79_25545) | 52197..55163 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| K8B79_RS25550 (K8B79_25550) | 55458..56162 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25555 (K8B79_25555) | 56227..56490 | + | 264 | Protein_70 | transposase | - |
| K8B79_RS25560 (K8B79_25560) | 56983..57567 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| K8B79_RS25565 (K8B79_25565) | 57567..58805 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| K8B79_RS25570 (K8B79_25570) | 58802..59707 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| K8B79_RS25575 (K8B79_25575) | 59829..60533 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25580 (K8B79_25580) | 60597..60935 | + | 339 | Protein_75 | Tn3 family transposase TnpR_Tn3 | Transposase |
| K8B79_RS25585 (K8B79_25585) | 61118..61978 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K8B79_RS25590 (K8B79_25590) | 62125..62406 | + | 282 | Protein_77 | IS91 family transposase ISPps1 | Transposase |
| K8B79_RS25595 (K8B79_25595) | 62576..63280 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K8B79_RS25600 (K8B79_25600) | 63334..63941 | - | 608 | Protein_79 | IS1 family transposase | - |
| K8B79_RS25605 (K8B79_25605) | 64141..64254 | + | 114 | Protein_80 | IS6 family transposase IS15DI | Transposase |
| K8B79_RS25610 (K8B79_25610) | 64392..64562 | + | 171 | Protein_81 | DsbA family protein | - |
| K8B79_RS25615 (K8B79_25615) | 64552..65058 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| K8B79_RS25620 (K8B79_25620) | 65295..66056 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| K8B79_RS25625 (K8B79_25625) | 66403..68289 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| K8B79_RS25630 (K8B79_25630) | 68330..68857 | + | 528 | WP_000178050.1 | iron transporter | - |
| K8B79_RS25635 (K8B79_25635) | 68961..70340 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| K8B79_RS25640 (K8B79_25640) | 70343..71626 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| K8B79_RS25645 (K8B79_25645) | 71616..72746 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| K8B79_RS25650 (K8B79_25650) | 72751..73446 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| K8B79_RS25655 (K8B79_25655) | 73433..73918 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| K8B79_RS25660 (K8B79_25660) | 73943..74428 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| K8B79_RS25665 (K8B79_25665) | 74550..75183 | + | 634 | Protein_92 | histidine-type phosphatase | - |
| K8B79_RS25670 (K8B79_25670) | 75333..75506 | - | 174 | Protein_93 | IS5 family transposase ISKpn26 | Transposase |
| K8B79_RS26715 (K8B79_25675) | 75507..75821 | - | 315 | Protein_94 | IS5 family transposase ISKpn26 | Transposase |
| K8B79_RS25680 (K8B79_25680) | 76494..77233 | - | 740 | Protein_95 | IS3 family transposase IS629 | Transposase |
| K8B79_RS25685 (K8B79_25685) | 77259..77564 | + | 306 | Protein_96 | IS91 family transposase ISSbo1 | Transposase |
| K8B79_RS25690 (K8B79_25690) | 78086..79261 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| K8B79_RS25695 (K8B79_25695) | 79330..81591 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| K8B79_RS25700 (K8B79_25700) | 81760..82536 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| K8B79_RS25705 (K8B79_25705) | 82544..83419 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| K8B79_RS25710 (K8B79_25710) | 83793..84418 | - | 626 | Protein_101 | replication initiation protein | - |
| K8B79_RS25715 (K8B79_25715) | 85870..86205 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| K8B79_RS25720 (K8B79_25720) | 86334..86681 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| K8B79_RS25725 (K8B79_25725) | 86701..87210 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| K8B79_RS25730 (K8B79_25730) | 87207..87467 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| K8B79_RS25735 (K8B79_25735) | 87569..88308 | + | 740 | Protein_106 | IS3 family transposase IS629 | Transposase |
| K8B79_RS25740 (K8B79_25740) | 88981..90489 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| K8B79_RS25745 (K8B79_25745) | 90579..90911 | + | 333 | Protein_108 | IS3 family transposase IS629 | Transposase |
| K8B79_RS25750 (K8B79_25750) | 90991..91395 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| K8B79_RS25755 (K8B79_25755) | 91392..91739 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| K8B79_RS25760 (K8B79_25760) | 91788..92733 | + | 946 | Protein_111 | IS66 family transposase ISEc8 | Transposase |
| K8B79_RS25765 (K8B79_25765) | 92819..93841 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| K8B79_RS25770 (K8B79_25770) | 93838..94620 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| K8B79_RS25775 (K8B79_25775) | 94688..95296 | + | 609 | Protein_114 | IS66 family transposase ISEc22 | Transposase |
| K8B79_RS25780 (K8B79_25780) | 95359..96150 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| K8B79_RS25785 (K8B79_25785) | 96157..98126 | - | 1970 | Protein_116 | Hemin receptor | VF |
| K8B79_RS25790 (K8B79_25790) | 98408..98832 | + | 425 | Protein_117 | IS3 family transposase IS2 | Transposase |
| K8B79_RS25795 (K8B79_25795) | 99369..99641 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| K8B79_RS25800 (K8B79_25800) | 100087..100262 | + | 176 | Protein_119 | IS3 family transposase | - |
| K8B79_RS25805 (K8B79_25805) | 100488..101657 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| K8B79_RS25810 (K8B79_25810) | 102024..102212 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| K8B79_RS25815 (K8B79_25815) | 102333..103073 | + | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| K8B79_RS25820 (K8B79_25820) | 103317..104294 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| K8B79_RS25825 (K8B79_25825) | 105037..105360 | + | 324 | Protein_124 | IS21 family transposase IS21 | Transposase |
| K8B79_RS25830 (K8B79_25830) | 105362..105466 | + | 105 | Protein_125 | AAA family ATPase | - |
| K8B79_RS25835 (K8B79_25835) | 105527..106040 | + | 514 | Protein_126 | DUF4113 domain-containing protein | - |
| K8B79_RS25845 (K8B79_25845) | 107220..107917 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|