MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP081888 Location: 7658..8638 Organism: Escherichia coli strain WW2 Replicon: plasmid unnamed3
Accession: NZ_CP081888 Location: 7658..8638 Organism: Escherichia coli strain WW2 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5O11_RS24545 (2716) | 2716..3918 | - | 1203 | WP_222563294.1 | restriction endonuclease subunit S | - |
| K5O11_RS24550 (3915) | 3915..5471 | - | 1557 | WP_222563295.1 | type I restriction-modification system subunit M | - |
| K5O11_RS24555 (5654) | 5654..5875 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5O11_RS24560 (5875) | 5875..6255 | + | 381 | WP_001694510.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K5O11_RS24565 (6260) | 6260..6439 | + | 180 | WP_000113018.1 | hypothetical protein | - |
| K5O11_RS24570 (6467) | 6467..6745 | + | 279 | Protein_6 | pdcB | - |
| K5O11_RS24575 (6750) | 6750..7163 | + | 414 | Protein_7 | integrase core domain-containing protein | - |
| K5O11_RS24580 (7113) | 7113..7448 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| K5O11_RS24585 (7658) | 7658..8638 | - | 981 | WP_001567628.1 | IS5 family transposase IS5D | Transposase |
| K5O11_RS24590 (8882) | 8882..10285 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| K5O11_RS24595 (10272) | 10272..11204 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| K5O11_RS24600 (11313) | 11313..12359 | - | 1047 | WP_000192349.1 | ferric ABC transporter ATP-binding protein | - |
| K5O11_RS24605 (12371) | 12371..12718 | - | 348 | Protein_13 | ABC transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0.001 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0.001 |