MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94675 bp
Accession: NZ_CP081744 Location: 1..94675 Organism: Escherichia coli strain CX15 Replicon: plasmid unnamed2
Accession: NZ_CP081744 Location: 1..94675 Organism: Escherichia coli strain CX15 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O52_RS24935 (J6O52_24850) | 53..757 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O52_RS24940 (J6O52_24855) | 821..1669 | - | 849 | Protein_1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| J6O52_RS24945 (J6O52_24860) | 1829..2413 | + | 585 | WP_012695450.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| J6O52_RS24950 (J6O52_24865) | 2598..3155 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| J6O52_RS24955 (J6O52_24870) | 3297..3878 | + | 582 | WP_020277920.1 | HTH-type transcriptional repressor NemR | VF |
| J6O52_RS24960 (J6O52_24875) | 3883..4221 | + | 339 | WP_021242988.1 | carboxymuconolactone decarboxylase family protein | - |
| J6O52_RS24965 (J6O52_24880) | 4251..4580 | - | 330 | WP_002431133.1 | thioredoxin family protein | - |
| J6O52_RS24970 (J6O52_24885) | 4794..5900 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| J6O52_RS24975 (J6O52_24890) | 5966..6667 | + | 702 | WP_020277918.1 | DsbA family oxidoreductase | - |
| J6O52_RS24980 (J6O52_24895) | 6733..7506 | + | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| J6O52_RS24985 (J6O52_24900) | 7692..8915 | - | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J6O52_RS24990 (J6O52_24905) | 9049..9918 | - | 870 | WP_001567390.1 | DMT family transporter | - |
| J6O52_RS24995 (J6O52_24910) | 10159..10911 | + | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| J6O52_RS25000 (J6O52_24915) | 10962..11251 | + | 290 | Protein_13 | Tn3 family transposase | - |
| J6O52_RS25005 (J6O52_24920) | 11351..12355 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| J6O52_RS25010 (J6O52_24925) | 12730..12996 | + | 267 | WP_001567383.1 | DUF1471 domain-containing protein | - |
| J6O52_RS25015 (J6O52_24930) | 13093..13650 | + | 558 | WP_001567382.1 | hypothetical protein | VF |
| J6O52_RS25020 (J6O52_24935) | 13863..14123 | + | 261 | WP_001567381.1 | DUF1471 domain-containing protein | - |
| J6O52_RS25025 (J6O52_24940) | 14154..14660 | + | 507 | WP_001567380.1 | DUF417 family protein | - |
| J6O52_RS25030 (J6O52_24945) | 14734..14871 | + | 138 | WP_021243014.1 | hypothetical protein | - |
| J6O52_RS25035 (J6O52_24950) | 14895..15356 | + | 462 | WP_021243015.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| J6O52_RS25040 (J6O52_24955) | 15346..15840 | + | 495 | WP_021243016.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| J6O52_RS25045 (J6O52_24960) | 16383..16841 | + | 459 | WP_131797681.1 | hypothetical protein | - |
| J6O52_RS25050 (J6O52_24965) | 16979..17242 | + | 264 | WP_000072676.1 | hypothetical protein | - |
| J6O52_RS25055 (J6O52_24970) | 17232..17531 | + | 300 | WP_021243018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O52_RS25060 (J6O52_24975) | 17593..17889 | - | 297 | WP_223610887.1 | entry exclusion protein 1 | - |
| J6O52_RS25065 (J6O52_24980) | 18027..18206 | + | 180 | WP_021243020.1 | Rop family plasmid primer RNA-binding protein | - |
| J6O52_RS25070 (J6O52_24985) | 18237..18500 | - | 264 | WP_021243021.1 | hypothetical protein | - |
| J6O52_RS25075 (J6O52_24990) | 18945..19649 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O52_RS25080 (J6O52_24995) | 19703..20467 | + | 765 | Protein_29 | IS4 family transposase IS421 | Transposase |
| J6O52_RS25085 (J6O52_25000) | 20660..20779 | - | 120 | WP_223610890.1 | type I toxin-antitoxin system Hok family toxin | - |
| J6O52_RS25090 | 20727..20837 | - | 111 | Protein_31 | FlmC family protein | - |
| J6O52_RS25100 (J6O52_25010) | 22082..22420 | + | 339 | WP_061353995.1 | hypothetical protein | - |
| J6O52_RS25105 (J6O52_25015) | 22738..23598 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| J6O52_RS25110 (J6O52_25020) | 23998..25203 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| J6O52_RS25115 (J6O52_25025) | 25200..26165 | + | 966 | WP_000725192.1 | ParB family protein | - |
| J6O52_RS25120 (J6O52_25030) | 26430..28136 | + | 1707 | WP_001514463.1 | hypothetical protein | - |
| J6O52_RS25125 (J6O52_25035) | 28196..29785 | + | 1590 | WP_033546052.1 | hypothetical protein | - |
| J6O52_RS25130 (J6O52_25040) | 29795..30610 | + | 816 | WP_001514461.1 | hypothetical protein | - |
| J6O52_RS25135 (J6O52_25045) | 30763..31227 | + | 465 | WP_223602149.1 | hypothetical protein | - |
| J6O52_RS25140 (J6O52_25050) | 31239..31748 | + | 510 | WP_054622924.1 | hypothetical protein | - |
| J6O52_RS25145 (J6O52_25055) | 32024..33135 | - | 1112 | Protein_42 | IS4 family transposase IS186B | Transposase |
| J6O52_RS25150 (J6O52_25060) | 33213..33368 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| J6O52_RS25155 (J6O52_25065) | 33703..34548 | - | 846 | WP_054622904.1 | helix-turn-helix domain-containing protein | - |
| J6O52_RS25160 (J6O52_25070) | 34578..35378 | - | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| J6O52_RS25165 (J6O52_25075) | 35542..36144 | - | 603 | Protein_46 | phage antirepressor KilAC domain-containing protein | - |
| J6O52_RS25175 (J6O52_25085) | 36894..37331 | - | 438 | WP_054622800.1 | hypothetical protein | Relaxase |
| J6O52_RS25180 (J6O52_25090) | 37342..38064 | - | 723 | WP_039022034.1 | hypothetical protein | - |
| J6O52_RS25185 (J6O52_25095) | 38298..39302 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| J6O52_RS25190 (J6O52_25100) | 39484..39873 | - | 390 | WP_001567989.1 | hypothetical protein | - |
| J6O52_RS25195 (J6O52_25105) | 40900..41451 | + | 552 | WP_223610888.1 | hypothetical protein | - |
| J6O52_RS25200 (J6O52_25110) | 41485..42182 | + | 698 | WP_223610889.1 | IS1 family transposase | - |
| J6O52_RS25205 (J6O52_25115) | 42328..43122 | - | 795 | WP_016240356.1 | site-specific integrase | - |
| J6O52_RS25210 (J6O52_25120) | 43320..44335 | - | 1016 | Protein_55 | hypothetical protein | - |
| J6O52_RS25215 (J6O52_25125) | 44505..44810 | - | 306 | WP_016240353.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| J6O52_RS25220 (J6O52_25130) | 44812..45030 | - | 219 | WP_016240352.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| J6O52_RS25225 (J6O52_25135) | 45630..45860 | + | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O52_RS25230 (J6O52_25140) | 45857..46273 | + | 417 | WP_032192044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O52_RS25235 (J6O52_25145) | 46309..46560 | + | 252 | WP_105966327.1 | hypothetical protein | - |
| J6O52_RS25240 (J6O52_25150) | 46641..47741 | - | 1101 | WP_032192045.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| J6O52_RS25245 (J6O52_25155) | 49063..50406 | - | 1344 | WP_032192047.1 | APC family permease | - |
| J6O52_RS25250 (J6O52_25160) | 50403..51314 | - | 912 | WP_032192052.1 | acetamidase/formamidase family protein | - |
| J6O52_RS25255 (J6O52_25165) | 51474..52178 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O52_RS25260 (J6O52_25170) | 52396..52752 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| J6O52_RS25265 (J6O52_25175) | 52742..53143 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| J6O52_RS25270 (J6O52_25180) | 53140..53430 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| J6O52_RS25275 (J6O52_25185) | 53695..54399 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O52_RS25280 (J6O52_25190) | 54452..56710 | - | 2259 | Protein_69 | molybdopterin-dependent oxidoreductase | - |
| J6O52_RS25285 (J6O52_25195) | 56703..57725 | - | 1023 | WP_016239794.1 | tetrathionate reductase subunit TtrC | - |
| J6O52_RS25290 (J6O52_25200) | 57726..58478 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| J6O52_RS25295 (J6O52_25205) | 58688..60421 | + | 1734 | WP_077947784.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| J6O52_RS25300 (J6O52_25210) | 60396..60980 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| J6O52_RS25305 (J6O52_25215) | 61073..61276 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| J6O52_RS25310 (J6O52_25220) | 61385..62365 | - | 981 | WP_016240301.1 | IS5 family transposase IS5D | Transposase |
| J6O52_RS25315 (J6O52_25225) | 62419..63650 | + | 1232 | WP_102596106.1 | IS3 family transposase IS2 | Transposase |
| J6O52_RS25320 (J6O52_25230) | 63657..64037 | + | 381 | Protein_77 | IS200/IS605 family transposase | - |
| J6O52_RS25325 (J6O52_25235) | 64271..64947 | + | 677 | WP_112793525.1 | IS1 family transposase | - |
| J6O52_RS25330 (J6O52_25240) | 64930..65400 | - | 471 | Protein_79 | IS30 family transposase IS30D | Transposase |
| J6O52_RS25335 (J6O52_25245) | 65468..65725 | - | 258 | Protein_80 | IS3 family transposase IS911 | Transposase |
| J6O52_RS25340 (J6O52_25250) | 65851..66015 | + | 165 | WP_000679356.1 | hypothetical protein | - |
| J6O52_RS25345 (J6O52_25255) | 66049..66489 | + | 441 | WP_000258162.1 | hypothetical protein | - |
| J6O52_RS25350 (J6O52_25260) | 66486..66734 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| J6O52_RS25355 (J6O52_25265) | 66773..67393 | - | 621 | WP_223610885.1 | helix-turn-helix domain-containing protein | - |
| J6O52_RS25360 (J6O52_25270) | 67428..68408 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| J6O52_RS25365 (J6O52_25275) | 68638..69096 | + | 459 | WP_223610886.1 | EAL domain-containing protein | - |
| J6O52_RS25370 (J6O52_25280) | 69150..69905 | - | 756 | WP_072134454.1 | hypothetical protein | - |
| J6O52_RS25375 (J6O52_25285) | 69984..70540 | - | 557 | Protein_88 | Ref family protein | - |
| J6O52_RS25380 (J6O52_25295) | 70782..71093 | - | 312 | WP_001224247.1 | hypothetical protein | - |
| J6O52_RS25385 (J6O52_25300) | 71144..72175 | - | 1032 | WP_000067528.1 | site-specific integrase | - |
| J6O52_RS25390 (J6O52_25305) | 72183..72404 | - | 222 | WP_000542335.1 | hypothetical protein | - |
| J6O52_RS25395 (J6O52_25310) | 73009..73218 | + | 210 | WP_016240428.1 | hypothetical protein | - |
| J6O52_RS25400 (J6O52_25315) | 73329..74180 | + | 852 | WP_016240427.1 | phage repressor protein C1 | - |
| J6O52_RS25405 (J6O52_25320) | 74213..74458 | - | 246 | Protein_94 | phage antirepressor KilAC domain-containing protein | - |
| J6O52_RS25410 (J6O52_25325) | 74494..75078 | - | 585 | Protein_95 | Tn3 family transposase ISEc63 | Transposase |
| J6O52_RS25415 (J6O52_25330) | 75131..75835 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O52_RS25420 (J6O52_25335) | 75901..76824 | - | 924 | Protein_97 | IS6 family transposase IS15 | Transposase |
| J6O52_RS25425 (J6O52_25340) | 76910..77362 | - | 453 | WP_053263817.1 | Late promoter-activating protein | - |
| J6O52_RS25430 (J6O52_25345) | 77451..78494 | - | 1044 | WP_054622888.1 | DUF968 domain-containing protein | - |
| J6O52_RS25435 (J6O52_25350) | 78522..78701 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| J6O52_RS25440 (J6O52_25355) | 78706..79086 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J6O52_RS25445 (J6O52_25360) | 79086..79307 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J6O52_RS25450 (J6O52_25365) | 79474..80178 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O52_RS25455 (J6O52_25370) | 80234..80530 | - | 297 | Protein_104 | IS481 family transposase ISAzs36 | Transposase |
| J6O52_RS25460 (J6O52_25375) | 80582..81286 | - | 705 | WP_001572363.1 | IS6 family transposase IS26 | Transposase |
| J6O52_RS25465 (J6O52_25380) | 81440..82462 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| J6O52_RS25470 (J6O52_25385) | 83508..83838 | + | 331 | Protein_107 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O52_RS25475 (J6O52_25390) | 83819..84100 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O52_RS25485 (J6O52_25400) | 85127..85324 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| J6O52_RS25490 (J6O52_25405) | 85365..87839 | - | 2475 | WP_139153868.1 | Ag(+)-translocating P-type ATPase SilP | - |
| J6O52_RS25495 (J6O52_25410) | 87937..88377 | - | 441 | WP_001549797.1 | DUF411 domain-containing protein | - |
| J6O52_RS25500 (J6O52_25415) | 88463..91607 | - | 3145 | Protein_113 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| J6O52_RS25505 (J6O52_25420) | 91618..92910 | - | 1293 | WP_042946269.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| J6O52_RS25510 (J6O52_25425) | 93024..93377 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| J6O52_RS25515 (J6O52_25430) | 93406..94671 | - | 1266 | Protein_116 | Cation efflux system protein CusC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|