MGE detailed information
MGE type: Conjugative plasmid MGE length: 105553 bp
Accession: NZ_CP081194 Location: 1..105553 Organism: Escherichia coli strain EC1722-1 Replicon: plasmid unnamed3
Accession: NZ_CP081194 Location: 1..105553 Organism: Escherichia coli strain EC1722-1 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F91_RS25120 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| K4F91_RS25125 (1773) | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| K4F91_RS25130 (2100) | 2100..2474 | - | 375 | Protein_2 | IS91 family transposase ISSbo1 | Transposase |
| K4F91_RS25135 (2632) | 2632..3659 | - | 1028 | Protein_3 | IS91 family transposase ISSbo1 | Transposase |
| K4F91_RS25140 (3640) | 3640..3912 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| K4F91_RS25145 (4164) | 4164..4940 | - | 777 | Protein_5 | IS91 family transposase ISSbo1 | Transposase |
| K4F91_RS25150 (5075) | 5075..5890 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| K4F91_RS25155 (5977) | 5977..6219 | + | 243 | Protein_7 | phosphoglucosamine mutase | - |
| K4F91_RS25160 (6455) | 6455..7948 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| K4F91_RS25165 (8060) | 8060..8365 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| K4F91_RS25170 (8393) | 8393..9607 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| K4F91_RS26875 (9824) | 9824..10708 | - | 885 | WP_260330813.1 | DUF3363 domain-containing protein | - |
| K4F91_RS25180 (10739) | 10739..11884 | - | 1146 | Protein_12 | IS91 family transposase ISVsa3 | Transposase |
| K4F91_RS25185 (12242) | 12242..12511 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| K4F91_RS25190 (12511) | 12511..12789 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| K4F91_RS25195 (12829) | 12829..13677 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| K4F91_RS25200 (13794) | 13794..14267 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| K4F91_RS25205 (14744) | 14744..15010 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| K4F91_RS25210 (15010) | 15010..15504 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| K4F91_RS25215 (15560) | 15560..16162 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| K4F91_RS25220 (16516) | 16516..17862 | + | 1347 | WP_001132032.1 | protein YagA | - |
| K4F91_RS25225 (18141) | 18141..20021 | + | 1881 | WP_001283341.1 | colicin Ia central receptor-binding domain-containing protein | - |
| K4F91_RS25230 (20039) | 20039..20386 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| K4F91_RS25235 (20505) | 20505..20853 | + | 349 | Protein_23 | DUF6404 family protein | - |
| K4F91_RS25240 (20873) | 20873..21463 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| K4F91_RS25245 (21463) | 21463..21720 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| K4F91_RS25250 (22071) | 22071..23072 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| K4F91_RS25255 (23248) | 23248..23592 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| K4F91_RS25260 (24091) | 24091..24345 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| K4F91_RS25265 (24390) | 24390..25316 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| K4F91_RS25270 (25848) | 25848..26261 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| K4F91_RS25275 (26263) | 26263..27042 | + | 780 | WP_021265673.1 | site-specific integrase | - |
| K4F91_RS25280 (27222) | 27222..27866 | + | 645 | WP_001144036.1 | ParA family protein | - |
| K4F91_RS25285 (27953) | 27953..28261 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| K4F91_RS25290 (28675) | 28675..29655 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| K4F91_RS25295 (29648) | 29648..30064 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| K4F91_RS25300 (30066) | 30066..31340 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| K4F91_RS25305 (31340) | 31340..31777 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K4F91_RS25310 (31774) | 31774..32022 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| K4F91_RS25315 (32440) | 32440..33342 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| K4F91_RS25320 (33339) | 33339..33650 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| K4F91_RS25325 (33727) | 33727..34410 | + | 684 | WP_000086178.1 | DNA methylase | - |
| K4F91_RS25330 (34411) | 34411..34632 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| K4F91_RS25335 (34592) | 34592..35078 | + | 487 | Protein_43 | DUF1380 domain-containing protein | - |
| K4F91_RS25340 (35129) | 35129..35899 | + | 771 | WP_001696732.1 | hypothetical protein | - |
| K4F91_RS25345 (36317) | 36317..36742 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| K4F91_RS25350 (36789) | 36789..37211 | + | 423 | WP_058647586.1 | DUF1380 family protein | - |
| K4F91_RS25355 (37208) | 37208..37399 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| K4F91_RS25360 (37470) | 37470..37784 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| K4F91_RS25365 (38168) | 38168..38695 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| K4F91_RS25370 (38753) | 38753..38986 | + | 234 | WP_052895272.1 | DUF905 domain-containing protein | - |
| K4F91_RS25375 (39045) | 39045..41003 | + | 1959 | WP_052895273.1 | ParB/RepB/Spo0J family partition protein | - |
| K4F91_RS25380 (41058) | 41058..41492 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| K4F91_RS25385 (41489) | 41489..42208 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| K4F91_RS25390 (42338) | 42338..43513 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| K4F91_RS25395 (43961) | 43961..44461 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| K4F91_RS25400 (45190) | 45190..45624 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| K4F91_RS25405 (45718) | 45718..45984 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| K4F91_RS25410 (46049) | 46049..46990 | + | 942 | WP_000038340.1 | Recombination-promoting nuclease RpnA | VF |
| K4F91_RS25415 (47052) | 47052..47258 | + | 207 | WP_000150315.1 | hypothetical protein | VF |
| K4F91_RS25420 (47289) | 47289..47540 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| K4F91_RS25430 (48120) | 48120..48968 | + | 849 | WP_052895274.1 | DUF4942 domain-containing protein | - |
| K4F91_RS25435 (49054) | 49054..49389 | - | 336 | WP_001599393.1 | hypothetical protein | - |
| K4F91_RS25440 (49623) | 49623..49955 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| K4F91_RS25445 (49966) | 49966..52665 | + | 2700 | WP_072105762.1 | Protein TraI | Relaxase |
| K4F91_RS25450 (52703) | 52703..54994 | - | 2292 | WP_072800778.1 | F-type conjugative transfer protein TrbC | - |
| K4F91_RS25455 (54987) | 54987..56057 | - | 1071 | WP_052895276.1 | IncI1-type conjugal transfer protein TrbB | - |
| K4F91_RS25460 (56076) | 56076..57284 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (57464) | 57464..57526 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (57464) | 57464..57526 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (57464) | 57464..57526 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (57464) | 57464..57526 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| K4F91_RS25465 (57576) | 57576..57728 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| K4F91_RS25470 (57800) | 57800..58051 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (58438) | 58438..58489 | - | 52 | NuclAT_1 | - | - |
| - (58438) | 58438..58489 | - | 52 | NuclAT_1 | - | - |
| - (58438) | 58438..58489 | - | 52 | NuclAT_1 | - | - |
| - (58438) | 58438..58489 | - | 52 | NuclAT_1 | - | - |
| K4F91_RS25475 (59329) | 59329..59466 | - | 138 | WP_049290858.1 | hypothetical protein | - |
| K4F91_RS25480 (59511) | 59511..60737 | - | 1227 | WP_052895285.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| K4F91_RS25485 (61379) | 61379..61588 | + | 210 | WP_052895278.1 | HEAT repeat domain-containing protein | - |
| K4F91_RS25490 (61660) | 61660..62322 | - | 663 | WP_052895279.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| K4F91_RS25495 (62393) | 62393..64564 | - | 2172 | WP_052895280.1 | DotA/TraY family protein | - |
| K4F91_RS25500 (64661) | 64661..65245 | - | 585 | WP_021013262.1 | IncI1-type conjugal transfer protein TraX | - |
| K4F91_RS25505 (65274) | 65274..66476 | - | 1203 | WP_001690627.1 | IncI1-type conjugal transfer protein TraW | - |
| K4F91_RS25510 (66443) | 66443..67057 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| K4F91_RS25515 (67057) | 67057..70101 | - | 3045 | WP_052895281.1 | IncI1-type conjugal transfer protein TraU | - |
| K4F91_RS25520 (70191) | 70191..70991 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| K4F91_RS25525 (70975) | 70975..71163 | - | 189 | WP_052895282.1 | putative conjugal transfer protein TraS | - |
| K4F91_RS25530 (71227) | 71227..71631 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| K4F91_RS25535 (71682) | 71682..72209 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| K4F91_RS25540 (72209) | 72209..72913 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| K4F91_RS25545 (72913) | 72913..74202 | - | 1290 | WP_072800781.1 | conjugal transfer protein TraO | - |
| K4F91_RS25550 (74205) | 74205..75188 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| K4F91_RS25555 (75199) | 75199..75891 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| K4F91_RS25560 (75888) | 75888..76235 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| K4F91_RS25565 (76253) | 76253..80020 | - | 3768 | WP_072800783.1 | DUF5710 domain-containing protein | - |
| K4F91_RS25570 (80110) | 80110..80661 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| K4F91_RS25575 (80676) | 80676..80966 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| K4F91_RS25580 (80963) | 80963..82111 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| K4F91_RS25585 (82108) | 82108..82926 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| K4F91_RS25590 (82923) | 82923..83381 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| K4F91_RS25595 (83776) | 83776..84360 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| K4F91_RS25600 (84420) | 84420..85622 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| K4F91_RS25605 (85708) | 85708..86532 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| K4F91_RS25610 (86683) | 86683..87837 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| K4F91_RS25615 (87836) | 87836..88153 | + | 318 | WP_001558195.1 | hypothetical protein | - |
| K4F91_RS25620 (89274) | 89274..90566 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| K4F91_RS25625 (90566) | 90566..91222 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| K4F91_RS25630 (91207) | 91207..91767 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| K4F91_RS25635 (91777) | 91777..92391 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| K4F91_RS25640 (92409) | 92409..93506 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| K4F91_RS25645 (93519) | 93519..95072 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| K4F91_RS25650 (95083) | 95083..95535 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| K4F91_RS25655 (95522) | 95522..96817 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| K4F91_RS25660 (96810) | 96810..98492 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| K4F91_RS25665 (98506) | 98506..98943 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| K4F91_RS25670 (98943) | 98943..100010 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| K4F91_RS25675 (100634) | 100634..100930 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| K4F91_RS25680 (101106) | 101106..101360 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| K4F91_RS25685 (101522) | 101522..102073 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| K4F91_RS25690 (102246) | 102246..102929 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| K4F91_RS25695 (103183) | 103183..103716 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| K4F91_RS25700 (104158) | 104158..104445 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| K4F91_RS25705 (104363) | 104363..104593 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.009 |