MGE detailed information
MGE type: Prophage MGE length: 54526 bp
Accession: NZ_CP081187 Location: 2079863..2134388 Organism: Salmonella enterica strain sg1722-1 Replicon: chromosome
Accession: NZ_CP081187 Location: 2079863..2134388 Organism: Salmonella enterica strain sg1722-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K4F82_RS10035 () | 2074919..2075371 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| K4F82_RS10040 () | 2075401..2076141 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| K4F82_RS10045 () | 2076178..2076699 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| K4F82_RS10050 () | 2076701..2077300 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| K4F82_RS10055 () | 2077927..2078823 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| K4F82_RS10060 () | 2079243..2079854 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| K4F82_RS10065 () | 2079863..2080873 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| K4F82_RS10070 () | 2080952..2081737 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| K4F82_RS10075 () | 2081734..2082489 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| K4F82_RS10080 () | 2082568..2083512 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| K4F82_RS10085 () | 2083528..2084847 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| K4F82_RS10090 () | 2084964..2085935 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| K4F82_RS10095 () | 2086008..2087450 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| K4F82_RS10100 () | 2087574..2088443 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| K4F82_RS10105 () | 2088785..2090260 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| K4F82_RS10110 () | 2090495..2092306 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K4F82_RS10115 () | 2092344..2092985 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K4F82_RS10120 () | 2093085..2094263 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K4F82_RS10125 () | 2094394..2094684 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K4F82_RS10130 () | 2094752..2095105 | + | 354 | WP_001042119.1 | protein YebF | - |
| K4F82_RS10135 () | 2095199..2095858 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K4F82_RS10140 () | 2096071..2098122 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K4F82_RS10145 () | 2098157..2098855 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K4F82_RS10150 () | 2098879..2099535 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K4F82_RS10155 () | 2099643..2099873 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K4F82_RS10160 () | 2100011..2100385 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K4F82_RS10165 () | 2100386..2101261 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K4F82_RS10170 () | 2101278..2101631 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2101731..2101876 | - | 146 | - | - | Antitoxin Detail |
| - | 2101771..2101874 | + | 104 | - | - | Toxin Detail |
| K4F82_RS10175 () | 2102005..2102928 | - | 924 | Protein_1997 | hypothetical protein ; Integrase | Integrase |
| K4F82_RS24270 () | 2103192..2103653 | - | 462 | Protein_1998 | DNA breaking-rejoining protein | - |
| K4F82_RS10185 () | 2103642..2103833 | + | 192 | Protein_1999 | glycoside hydrolase family 19 protein | - |
| K4F82_RS10190 () | 2103887..2104420 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K4F82_RS10195 () | 2104677..2104844 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K4F82_RS10200 () | 2104909..2105097 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K4F82_RS10205 () | 2105152..2105412 | + | 261 | Protein_2003 | DUF1441 family protein | - |
| K4F82_RS10210 () | 2105627..2105971 | + | 345 | Protein_2004 | macro domain-containing protein | - |
| K4F82_RS10215 () | 2105981..2106451 | + | 471 | Protein_2005 | tail fiber assembly protein | - |
| K4F82_RS10220 () | 2106548..2106748 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K4F82_RS24275 () | 2107138..2107318 | - | 181 | Protein_2007 | IS3 family transposase | - |
| K4F82_RS10225 () | 2107309..2107410 | + | 102 | Protein_2008 | arsenic transporter | - |
| K4F82_RS24280 () | 2108032..2108264 | + | 233 | Protein_2009 | helix-turn-helix domain-containing protein | - |
| K4F82_RS10240 () | 2108591..2109205 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K4F82_RS10245 () | 2109215..2109373 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K4F82_RS10250 () | 2109506..2110420 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K4F82_RS10255 () | 2111733..2112155 | - | 423 | Protein_2013 | hypothetical protein ; Integrase | Integrase |
| K4F82_RS10260 () | 2112225..2113419 | + | 1195 | Protein_2014 | IS256 family transposase IS285 | Transposase |
| K4F82_RS10265 () | 2113565..2113705 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K4F82_RS10270 () | 2113871..2114140 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K4F82_RS10275 () | 2114510..2114929 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K4F82_RS10280 () | 2115317..2115793 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K4F82_RS10285 () | 2116123..2116518 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K4F82_RS10290 () | 2117201..2117923 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| K4F82_RS10295 () | 2118208..2118372 | + | 165 | WP_001134856.1 | membrane protein | - |
| K4F82_RS10300 () | 2118596..2119246 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K4F82_RS10305 () | 2119265..2119456 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K4F82_RS10310 () | 2119567..2119803 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K4F82_RS10315 () | 2119921..2121360 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K4F82_RS10320 () | 2121438..2124071 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K4F82_RS10325 () | 2124040..2125323 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K4F82_RS10330 () | 2125452..2125949 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K4F82_RS10335 () | 2126047..2126733 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K4F82_RS10340 () | 2126753..2128801 | + | 2049 | WP_033567178.1 | carboxy terminal-processing peptidase | - |
| K4F82_RS10345 () | 2128995..2129876 | + | 882 | WP_000984498.1 | protease HtpX | - |
| K4F82_RS10350 () | 2129924..2131297 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| K4F82_RS10355 () | 2131473..2132264 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| K4F82_RS10360 () | 2132476..2132715 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| K4F82_RS10365 () | 2132873..2133016 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| K4F82_RS10370 () | 2133087..2133374 | + | 288 | WP_001000660.1 | YebO family protein | - |
| K4F82_RS10375 () | 2134023..2134166 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| K4F82_RS10380 () | 2134179..2134388 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| K4F82_RS10385 () | 2134608..2136353 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| K4F82_RS10390 () | 2136419..2137228 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| K4F82_RS10395 () | 2137225..2137791 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| K4F82_RS10400 () | 2138201..2138659 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.009 |