MGE detailed information
MGE type: Conjugative plasmid MGE length: 110148 bp
Accession: NZ_CP080082 Location: 1..110148 Organism: Escherichia coli strain 19SZHZ886Rt Replicon: plasmid p886Rt_hybrid
Accession: NZ_CP080082 Location: 1..110148 Organism: Escherichia coli strain 19SZHZ886Rt Replicon: plasmid p886Rt_hybrid
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZO17_RS23450 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| KZO17_RS23455 (1215) | 1215..1955 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| KZO17_RS23460 (2076) | 2076..2210 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| KZO17_RS23465 (2712) | 2712..4211 | - | 1500 | WP_063073405.1 | alpha/beta hydrolase | - |
| KZO17_RS23470 (4304) | 4304..5253 | - | 950 | Protein_4 | Outer membrane protease OmpP | VF |
| KZO17_RS23475 (5506) | 5506..6486 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| KZO17_RS23485 (8437) | 8437..12624 | + | 4188 | WP_223384816.1 | Outer membrane protein IcsA autotransporter | VF |
| KZO17_RS23490 (12726) | 12726..13706 | + | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| KZO17_RS23495 (13972) | 13972..14289 | - | 318 | Protein_9 | IS3 family transposase ISKpn37 | Transposase |
| KZO17_RS23500 (14595) | 14595..15095 | + | 501 | Protein_10 | IS21 family transposase IS100kyp | Transposase |
| KZO17_RS23505 (15092) | 15092..15787 | + | 696 | WP_074440817.1 | IS21 family transposase IS100kyp | Transposase |
| KZO17_RS23510 (16006) | 16006..16812 | - | 807 | WP_020219156.1 | site-specific integrase | - |
| KZO17_RS23515 (16813) | 16813..17118 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KZO17_RS23520 (17120) | 17120..17338 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KZO17_RS23525 (17662) | 17662..17919 | + | 258 | WP_249776109.1 | hypothetical protein | - |
| KZO17_RS23530 (18154) | 18154..18444 | - | 291 | WP_000990619.1 | hypothetical protein | - |
| KZO17_RS23535 (18441) | 18441..18593 | - | 153 | WP_001330798.1 | hypothetical protein | - |
| KZO17_RS23540 (18743) | 18743..19357 | - | 615 | WP_001330797.1 | IS3 family transposase | - |
| KZO17_RS23545 (19412) | 19412..19747 | + | 336 | WP_001330796.1 | hypothetical protein | - |
| KZO17_RS23555 (20880) | 20880..24956 | + | 4077 | WP_063073396.1 | Serine protease SepA autotransporter | VF |
| KZO17_RS23560 (25134) | 25134..25823 | - | 690 | Protein_22 | IS3 family transposase | - |
| KZO17_RS23565 (25858) | 25858..26592 | - | 735 | Protein_23 | IS66 family transposase ISEc8 | Transposase |
| KZO17_RS23570 (26656) | 26656..27818 | + | 1163 | WP_099145072.1 | IS3 family transposase ISEc17 | Transposase |
| KZO17_RS23580 (28917) | 28917..29174 | - | 258 | WP_001032733.1 | hypothetical protein | - |
| KZO17_RS23585 (29243) | 29243..30940 | - | 1698 | WP_000401034.1 | sulfatase | - |
| KZO17_RS23590 (31036) | 31036..32172 | - | 1137 | WP_033804283.1 | Outer membrane porin protein OmpD | VF |
| KZO17_RS23595 (32726) | 32726..33954 | + | 1229 | WP_167654659.1 | IS3 family transposase IS2 | Transposase |
| KZO17_RS23600 (34023) | 34023..34212 | + | 190 | Protein_30 | IS66 family insertion sequence element accessory protein TnpB | - |
| KZO17_RS23605 (34215) | 34215..34403 | - | 189 | WP_063073487.1 | DUF1187 family protein | - |
| KZO17_RS23610 (34483) | 34483..34971 | + | 489 | Protein_32 | IS91 family transposase ISSbo1 | Transposase |
| KZO17_RS23615 (35238) | 35238..35513 | - | 276 | WP_063073486.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KZO17_RS23620 (35513) | 35513..35797 | - | 285 | WP_062894229.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KZO17_RS23625 (36708) | 36708..37565 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| KZO17_RS23630 (37558) | 37558..38040 | - | 483 | WP_074149688.1 | hypothetical protein | - |
| KZO17_RS23635 (38033) | 38033..38080 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| KZO17_RS23640 (38071) | 38071..38322 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| KZO17_RS23645 (38339) | 38339..38596 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| KZO17_RS23650 (38862) | 38862..39722 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KZO17_RS23655 (39905) | 39905..40462 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| KZO17_RS23660 (40626) | 40626..43631 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KZO17_RS23665 (43814) | 43814..43960 | - | 147 | Protein_43 | Hok/Gef family protein | - |
| - (44004) | 44004..44065 | + | 62 | NuclAT_1 | - | - |
| - (44004) | 44004..44065 | + | 62 | NuclAT_1 | - | - |
| - (44004) | 44004..44065 | + | 62 | NuclAT_1 | - | - |
| - (44004) | 44004..44065 | + | 62 | NuclAT_1 | - | - |
| KZO17_RS23670 (44648) | 44648..44860 | - | 213 | WP_032084501.1 | hypothetical protein | - |
| KZO17_RS23675 (44994) | 44994..45554 | - | 561 | WP_063073483.1 | fertility inhibition protein FinO | - |
| KZO17_RS23680 (45609) | 45609..46355 | - | 747 | WP_063073482.1 | conjugal transfer pilus acetylase TraX | - |
| KZO17_RS23685 (46375) | 46375..51645 | - | 5271 | WP_063073481.1 | Multifunctional conjugation protein TraI | Relaxase |
| KZO17_RS23690 (51645) | 51645..53807 | - | 2163 | WP_001332348.1 | type IV conjugative transfer system coupling protein TraD | - |
| KZO17_RS23695 (54059) | 54059..54790 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| KZO17_RS23700 (54804) | 54804..55313 | - | 510 | WP_063073480.1 | conjugal transfer entry exclusion protein TraS | - |
| KZO17_RS23705 (55310) | 55310..58135 | - | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KZO17_RS23710 (58132) | 58132..59505 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| KZO17_RS23715 (59505) | 59505..59867 | - | 363 | WP_074149687.1 | P-type conjugative transfer protein TrbJ | - |
| KZO17_RS23720 (59797) | 59797..60342 | - | 546 | WP_000052614.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KZO17_RS23725 (60329) | 60329..60613 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KZO17_RS23730 (60732) | 60732..61079 | - | 348 | WP_196055119.1 | conjugal transfer protein TrbA | - |
| KZO17_RS23735 (61095) | 61095..61838 | - | 744 | WP_063073478.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KZO17_RS23740 (61831) | 61831..62088 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| KZO17_RS23745 (62115) | 62115..63923 | - | 1809 | WP_033804337.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KZO17_RS23750 (63920) | 63920..64558 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KZO17_RS23755 (64567) | 64567..65559 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| KZO17_RS23760 (65556) | 65556..66188 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| KZO17_RS23765 (66185) | 66185..66571 | - | 387 | WP_001585100.1 | type-F conjugative transfer system protein TrbI | - |
| KZO17_RS23770 (66568) | 66568..69195 | - | 2628 | WP_033804336.1 | type IV secretion system protein TraC | - |
| KZO17_RS23775 (69361) | 69361..69582 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| KZO17_RS23780 (69717) | 69717..70232 | - | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KZO17_RS23785 (70232) | 70232..70549 | - | 318 | WP_024189706.1 | conjugal transfer protein TrbD | - |
| KZO17_RS23790 (70536) | 70536..71123 | - | 588 | WP_063073477.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KZO17_RS23795 (71113) | 71113..72540 | - | 1428 | WP_000146636.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KZO17_RS23800 (72540) | 72540..73268 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KZO17_RS23805 (73255) | 73255..73821 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| KZO17_RS23810 (73843) | 73843..74154 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| KZO17_RS23815 (74169) | 74169..74534 | - | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| KZO17_RS23820 (74568) | 74568..74795 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| KZO17_RS23825 (74890) | 74890..75576 | - | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| KZO17_RS23830 (75767) | 75767..76150 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KZO17_RS23835 (76427) | 76427..77074 | + | 648 | WP_148726238.1 | hypothetical protein | VF |
| KZO17_RS23840 (77371) | 77371..78192 | - | 822 | WP_033804334.1 | DUF932 domain-containing protein | - |
| KZO17_RS23845 (78311) | 78311..78598 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| KZO17_RS23850 (78623) | 78623..78829 | - | 207 | WP_033804333.1 | hypothetical protein | - |
| KZO17_RS23855 (78899) | 78899..79072 | + | 174 | Protein_81 | hypothetical protein | - |
| KZO17_RS23860 (79070) | 79070..79300 | - | 231 | WP_071845785.1 | hypothetical protein | - |
| KZO17_RS23865 (79520) | 79520..79645 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KZO17_RS23870 (79587) | 79587..79736 | - | 150 | Protein_84 | plasmid maintenance protein Mok | - |
| - (79722) | 79722..79946 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (79722) | 79722..79946 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (79722) | 79722..79946 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (79722) | 79722..79946 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| KZO17_RS23875 (79758) | 79758..79946 | + | 189 | WP_063073474.1 | hypothetical protein | - |
| KZO17_RS23880 (79915) | 79915..80677 | - | 763 | Protein_86 | plasmid SOS inhibition protein A | - |
| KZO17_RS23885 (80674) | 80674..81108 | - | 435 | WP_000845907.1 | conjugation system SOS inhibitor PsiB | - |
| KZO17_RS23890 (81163) | 81163..83121 | - | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| KZO17_RS23895 (83186) | 83186..83419 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| KZO17_RS23900 (83481) | 83481..83933 | - | 453 | WP_000290842.1 | single-stranded DNA-binding protein | - |
| KZO17_RS23905 (83959) | 83959..84165 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| KZO17_RS23910 (84406) | 84406..84681 | - | 276 | WP_071780182.1 | hypothetical protein | - |
| KZO17_RS23915 (84576) | 84576..84806 | - | 231 | WP_021526513.1 | hypothetical protein | - |
| KZO17_RS23920 (84832) | 84832..85395 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| KZO17_RS23925 (85443) | 85443..86804 | - | 1362 | WP_014106968.1 | DUF3560 domain-containing protein | - |
| KZO17_RS23930 (86856) | 86856..87086 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| KZO17_RS23935 (88124) | 88124..88315 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| KZO17_RS23940 (88312) | 88312..88746 | - | 435 | WP_014106967.1 | DUF1380 family protein | - |
| KZO17_RS23945 (88793) | 88793..89218 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| KZO17_RS23950 (89635) | 89635..90411 | - | 777 | WP_063073488.1 | hypothetical protein | - |
| KZO17_RS23955 (90462) | 90462..90980 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| KZO17_RS23960 (90910) | 90910..91131 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| KZO17_RS23965 (91132) | 91132..91815 | - | 684 | WP_001775017.1 | DNA methylase | - |
| KZO17_RS23970 (91892) | 91892..92197 | - | 306 | WP_063073472.1 | hypothetical protein | - |
| KZO17_RS23975 (92201) | 92201..93103 | - | 903 | WP_148934335.1 | DUF1281 domain-containing protein | - |
| KZO17_RS23980 (93521) | 93521..93769 | + | 249 | WP_001775014.1 | DinI-like family protein | - |
| KZO17_RS23985 (93766) | 93766..94203 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KZO17_RS23990 (94203) | 94203..95473 | + | 1271 | Protein_108 | Y-family DNA polymerase | - |
| KZO17_RS23995 (95478) | 95478..95870 | - | 393 | WP_063073471.1 | plasmid partitioning/stability family protein | - |
| KZO17_RS24000 (95875) | 95875..96846 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| KZO17_RS24005 (97075) | 97075..97719 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| KZO17_RS24010 (97713) | 97713..97988 | + | 276 | WP_050858693.1 | hypothetical protein | - |
| KZO17_RS24015 (98140) | 98140..98931 | - | 792 | WP_000016494.1 | site-specific integrase | - |
| KZO17_RS24020 (98928) | 98928..99434 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| KZO17_RS24025 (99425) | 99425..100129 | + | 705 | WP_001775011.1 | IS6-like element IS26 family transposase | - |
| KZO17_RS24030 (100276) | 100276..100452 | - | 177 | Protein_116 | hypothetical protein | - |
| KZO17_RS24035 (100409) | 100409..100639 | + | 231 | WP_063073411.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| KZO17_RS24040 (100636) | 100636..101052 | + | 417 | WP_063073410.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KZO17_RS24045 (101126) | 101126..102688 | + | 1563 | WP_063073409.1 | AAA family ATPase | - |
| KZO17_RS24050 (102673) | 102673..103695 | + | 1023 | WP_063073408.1 | hypothetical protein | - |
| KZO17_RS24055 (103982) | 103982..104212 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| KZO17_RS24060 (104209) | 104209..104304 | + | 96 | Protein_122 | VapC toxin family PIN domain ribonuclease | - |
| KZO17_RS24065 (104363) | 104363..105147 | - | 785 | Protein_123 | IS21-like element helper ATPase IstB | - |
| KZO17_RS24070 (105147) | 105147..105800 | - | 654 | Protein_124 | IS21 family transposase IS21 | Transposase |
| KZO17_RS24080 (108333) | 108333..108974 | + | 642 | WP_089533208.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|