MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP079770 Location: 2999352..3008702 Organism: Escherichia coli strain HL15 Replicon: chromosome
Accession: NZ_CP079770 Location: 2999352..3008702 Organism: Escherichia coli strain HL15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX58_RS16365 (2995154) | 2995154..2995492 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| KYX58_RS16370 (2995468) | 2995468..2997165 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| KYX58_RS16375 (2997202) | 2997202..2997777 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| KYX58_RS16390 (2999352) | 2999352..3000890 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KYX58_RS16395 (3001255) | 3001255..3002589 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KYX58_RS16400 (3002669) | 3002669..3004816 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KYX58_RS16405 (3004875) | 3004875..3006332 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KYX58_RS16410 (3006569) | 3006569..3008086 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KYX58_RS16415 (3008205) | 3008205..3008378 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KYX58_RS16420 (3008406) | 3008406..3008702 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KYX58_RS16425 (3008929) | 3008929..3009201 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| KYX58_RS16430 (3009213) | 3009213..3009443 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KYX58_RS16435 (3009624) | 3009624..3011255 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| KYX58_RS16440 (3011252) | 3011252..3011971 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |