NZ_CP0797531..167012

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 167012 bp
Accession: NZ_CP079753        Location: 1..167012         Organism: Raoultella ornithinolytica strain NY1       Replicon: plasmid pNY1A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KXJ76_RS26325 (KXJ76_26325) 1..892 - 892 Protein_0 urocanate hydratase -
KXJ76_RS27350 1649..2037 + 389 Protein_1 Osmoprotectant import ATP-binding protein OsmV VF
KXJ76_RS27355 2122..2397 + 276 WP_223306707.1 hypothetical protein -
KXJ76_RS26335 (KXJ76_26335) 2430..3039 + 610 Protein_3 ABC transporter permease subunit -
KXJ76_RS26340 (KXJ76_26340) 3099..3608 + 510 Protein_4 aromatic amino acid lyase -
KXJ76_RS26345 (KXJ76_26345) 3642..4199 - 558 WP_040118404.1 HutD family protein -
KXJ76_RS26350 (KXJ76_26350) 4196..4957 - 762 WP_032413289.1 histidine utilization repressor -
KXJ76_RS26355 (KXJ76_26355) 5056..6423 + 1368 WP_004118890.1 formimidoylglutamate deiminase -
KXJ76_RS26360 (KXJ76_26360) 6646..7337 - 692 Protein_8 IS1 family transposase -
KXJ76_RS26365 (KXJ76_26365) 8143..9549 + 1407 WP_004118895.1 cytosine permease -
KXJ76_RS26370 (KXJ76_26370) 9586..11175 + 1590 WP_004118898.1 AMP-binding protein -
KXJ76_RS26375 (KXJ76_26375) 11172..12164 + 993 WP_004118901.1 DsbA family protein -
KXJ76_RS26380 (KXJ76_26380) 12282..12389 - 108 Protein_12 antirestriction protein ArdA -
KXJ76_RS26385 (KXJ76_26385) 12791..13140 + 350 Protein_13 IS1-like element transposase -
KXJ76_RS26390 (KXJ76_26390) 13152..14327 - 1176 Protein_14 IS3 family transposase -
KXJ76_RS26395 (KXJ76_26395) 14404..15369 - 966 WP_004118922.1 DMT family transporter -
KXJ76_RS26400 (KXJ76_26400) 15366..16184 - 819 WP_004118925.1 Glutamine transport ATP-binding protein GlnQ VF
KXJ76_RS26405 (KXJ76_26405) 16189..16851 - 663 WP_004118928.1 amino acid ABC transporter permease -
KXJ76_RS26410 (KXJ76_26410) 16848..17519 - 672 WP_004118931.1 amino acid ABC transporter permease -
KXJ76_RS26415 (KXJ76_26415) 17543..18391 - 849 WP_004118155.1 transporter substrate-binding domain-containing protein -
KXJ76_RS26420 (KXJ76_26420) 18548..19501 + 954 WP_004118935.1 Glycine cleavage system transcriptional activator VF
KXJ76_RS26425 (KXJ76_26425) 19588..20799 + 1212 WP_004118158.1 M24 family metallopeptidase -
KXJ76_RS26430 (KXJ76_26430) 20930..21897 + 968 Protein_22 IS5 family transposase IS903B Transposase
KXJ76_RS26435 (KXJ76_26435) 22114..22701 - 588 WP_032716672.1 fertility inhibition protein FinO -
KXJ76_RS26440 (KXJ76_26440) 22843..23568 - 726 WP_040118407.1 type-F conjugative transfer system pilin acetylase TraX -
KXJ76_RS26445 (KXJ76_26445) 23661..26078 - 2418 Protein_25 Multifunctional conjugation protein TraI Relaxase
KXJ76_RS26450 (KXJ76_26450) 26726..27460 - 735 WP_040118416.1 type-F conjugative transfer system secretin TraK -
KXJ76_RS26455 (KXJ76_26455) 27447..28013 - 567 WP_040118417.1 type IV conjugative transfer system protein TraE -
KXJ76_RS26460 (KXJ76_26460) 28033..28338 - 306 WP_020323523.1 type IV conjugative transfer system protein TraL -
KXJ76_RS26465 (KXJ76_26465) 28352..28720 - 369 WP_047665734.1 type IV conjugative transfer system pilin TraA -
KXJ76_RS26470 (KXJ76_26470) 28782..28946 - 165 WP_032444506.1 TraY domain-containing protein -
KXJ76_RS26475 (KXJ76_26475) 29124..29813 - 690 WP_071889125.1 hypothetical protein -
KXJ76_RS26480 (KXJ76_26480) 30014..30403 - 390 WP_032700831.1 conjugal transfer relaxosome DNA-binding protein TraM -
KXJ76_RS26485 (KXJ76_26485) 30828..31307 + 480 WP_032732069.1 hypothetical protein VF
KXJ76_RS26490 (KXJ76_26490) 31345..31875 - 531 WP_032716647.1 antirestriction protein -
KXJ76_RS26495 (KXJ76_26495) 32560..32706 - 147 WP_032700834.1 hypothetical protein -
KXJ76_RS26500 (KXJ76_26500) 32800..33147 - 348 WP_032700835.1 hypothetical protein -
KXJ76_RS26505 (KXJ76_26505) 33173..33331 - 159 WP_162180130.1 hypothetical protein -
KXJ76_RS26510 (KXJ76_26510) 33388..33663 - 276 WP_032700867.1 hypothetical protein -
KXJ76_RS26515 (KXJ76_26515) 34482..34763 - 282 WP_004118961.1 helix-turn-helix transcriptional regulator -
KXJ76_RS26520 (KXJ76_26520) 34744..35073 - 330 WP_004118963.1 type II toxin-antitoxin system RelE/ParE family toxin -
KXJ76_RS27360 35393..35480 - 88 Protein_41 theronine dehydrogenase -
KXJ76_RS26525 (KXJ76_26525) 35477..36205 - 729 WP_004118966.1 plasmid SOS inhibition protein A -
KXJ76_RS26530 (KXJ76_26530) 36202..36633 - 432 WP_004118968.1 conjugation system SOS inhibitor PsiB -
KXJ76_RS27365 36677..36805 - 129 Protein_44 hypothetical protein -
KXJ76_RS26535 (KXJ76_26535) 36924..37154 - 231 WP_047665741.1 hypothetical protein -
KXJ76_RS26540 (KXJ76_26540) 37218..37889 - 672 WP_032700854.1 plasmid partitioning/stability family protein -
KXJ76_RS26545 (KXJ76_26545) 37892..38863 - 972 WP_077255421.1 plasmid segregation protein ParM -
KXJ76_RS26550 (KXJ76_26550) 39082..39525 + 444 WP_040118420.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KXJ76_RS26555 (KXJ76_26555) 39525..40793 + 1269 WP_032752101.1 Y-family DNA polymerase -
KXJ76_RS26560 (KXJ76_26560) 40958..41209 + 252 WP_032752108.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
KXJ76_RS26565 (KXJ76_26565) 41206..41493 + 288 WP_032693963.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
KXJ76_RS26570 (KXJ76_26570) 42586..42858 + 273 Protein_52 DNA polymerase V subunit UmuC -
KXJ76_RS26575 (KXJ76_26575) 43659..44630 - 972 WP_032752114.1 ParB/RepB/Spo0J family plasmid partition protein -
KXJ76_RS26580 (KXJ76_26580) 44630..45796 - 1167 WP_032752115.1 Sporulation initiation inhibitor protein Soj VF
KXJ76_RS26585 (KXJ76_26585) 46615..47625 + 1011 WP_032752116.1 RepB family plasmid replication initiator protein -
KXJ76_RS26590 (KXJ76_26590) 47934..48674 - 741 WP_032752117.1 site-specific integrase -
KXJ76_RS26595 (KXJ76_26595) 49139..50830 - 1692 WP_047665743.1 AIPR family protein -
KXJ76_RS26600 (KXJ76_26600) 51243..51775 - 533 Protein_58 IS256 family transposase ISEae1 Transposase
KXJ76_RS26605 (KXJ76_26605) 52102..52845 - 744 WP_040118423.1 site-specific integrase -
KXJ76_RS26610 (KXJ76_26610) 52887..53216 - 330 WP_040118424.1 hypothetical protein -
KXJ76_RS26615 (KXJ76_26615) 53525..54193 - 669 WP_040118425.1 hypothetical protein -
KXJ76_RS26620 (KXJ76_26620) 54442..55610 + 1169 WP_098141323.1 IS3 family transposase ISLad1 Transposase
KXJ76_RS26625 (KXJ76_26625) 55603..55806 - 204 WP_047665745.1 hypothetical protein -
KXJ76_RS26630 (KXJ76_26630) 56684..57592 + 909 WP_047665749.1 HNH endonuclease -
KXJ76_RS26635 (KXJ76_26635) 58000..58350 - 351 WP_007871800.1 DUF305 domain-containing protein -
KXJ76_RS26640 (KXJ76_26640) 58496..58927 - 432 WP_007374411.1 silver-binding protein SilE -
KXJ76_RS26645 (KXJ76_26645) 59173..60648 - 1476 WP_040118426.1 copper/silver sensor histidine kinase SilS -
KXJ76_RS26650 (KXJ76_26650) 60641..61321 - 681 WP_004118655.1 Transcriptional regulatory protein CusR VF
KXJ76_RS26655 (KXJ76_26655) 61511..62896 + 1386 WP_000475503.1 Cation efflux system protein CusC VF
KXJ76_RS26660 (KXJ76_26660) 62925..63278 + 354 WP_001246153.1 cation efflux system protein CusF -
KXJ76_RS26665 (KXJ76_26665) 63392..64684 + 1293 WP_001485328.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
KXJ76_RS26670 (KXJ76_26670) 64695..67841 + 3147 WP_000574021.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
KXJ76_RS26675 (KXJ76_26675) 67928..68368 + 441 WP_002436620.1 DUF411 domain-containing protein -
KXJ76_RS26680 (KXJ76_26680) 68466..70937 + 2472 WP_128306664.1 Ag(+)-translocating P-type ATPase SilP -
KXJ76_RS26685 (KXJ76_26685) 70978..71175 + 198 WP_000843497.1 DUF2933 domain-containing protein -
KXJ76_RS26690 (KXJ76_26690) 71209..71946 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
KXJ76_RS26695 (KXJ76_26695) 72235..72684 - 450 WP_001023257.1 copper resistance protein -
KXJ76_RS26700 (KXJ76_26700) 72919..74736 + 1818 WP_000925242.1 multicopper oxidase PcoA -
KXJ76_RS26705 (KXJ76_26705) 74742..75632 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
KXJ76_RS26710 (KXJ76_26710) 75672..76052 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
KXJ76_RS26715 (KXJ76_26715) 76057..76986 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
KXJ76_RS26720 (KXJ76_26720) 77041..77721 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
KXJ76_RS26725 (KXJ76_26725) 77718..79118 + 1401 WP_002436614.1 copper resistance membrane spanning protein PcoS -
KXJ76_RS26730 (KXJ76_26730) 79334..79768 + 435 WP_004118347.1 hypothetical protein -
KXJ76_RS27370 79947..80109 - 163 Protein_85 type II toxin-antitoxin system RelE/ParE family toxin -
KXJ76_RS26740 (KXJ76_26740) 80231..80410 - 180 WP_004118349.1 type II toxin-antitoxin system ParD family antitoxin -
KXJ76_RS26745 (KXJ76_26745) 80724..80987 + 264 WP_009310051.1 hypothetical protein -
KXJ76_RS26750 (KXJ76_26750) 80984..81550 + 567 WP_009310052.1 hypothetical protein -
KXJ76_RS26755 (KXJ76_26755) 81581..82075 + 495 WP_004213594.1 hypothetical protein -
KXJ76_RS26760 (KXJ76_26760) 82136..82339 + 204 WP_004150739.1 HHA domain-containing protein -
KXJ76_RS26765 (KXJ76_26765) 82433..83601 + 1169 WP_142132149.1 IS3 family transposase ISLad1 Transposase
KXJ76_RS26770 (KXJ76_26770) 84031..85584 - 1554 WP_032716625.1 L-lactate permease -
KXJ76_RS26775 (KXJ76_26775) 86020..87717 + 1698 WP_003033249.1 D-lactate dehydrogenase -
KXJ76_RS26780 (KXJ76_26780) 87792..88511 + 720 WP_001102107.1 (Fe-S)-binding protein -
KXJ76_RS26785 (KXJ76_26785) 88522..89949 + 1428 WP_000023895.1 LutB/LldF family L-lactate oxidation iron-sulfur protein -
KXJ76_RS26790 (KXJ76_26790) 89942..90637 + 696 WP_004118595.1 lactate utilization protein C -
KXJ76_RS26795 (KXJ76_26795) 90687..91067 - 381 Protein_97 gluconate permease -
KXJ76_RS26800 (KXJ76_26800) 91278..91589 + 312 WP_004118600.1 type II toxin-antitoxin system HigB family toxin Toxin Detail
KXJ76_RS26805 (KXJ76_26805) 91586..92005 + 420 WP_000990392.1 helix-turn-helix domain-containing protein Antitoxin Detail
KXJ76_RS26810 (KXJ76_26810) 92042..93244 - 1203 WP_003031541.1 hypothetical protein -
KXJ76_RS26815 (KXJ76_26815) 93237..93566 - 330 WP_004118613.1 hypothetical protein -
KXJ76_RS26820 (KXJ76_26820) 93563..94222 - 660 WP_000078540.1 hypothetical protein -
KXJ76_RS27375 94646..95002 - 357 WP_077253206.1 Ref family recombination enhancement nuclease -
KXJ76_RS27380 95122..95262 - 141 WP_004118614.1 hypothetical protein -
KXJ76_RS26830 (KXJ76_26830) 95555..95908 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
KXJ76_RS26835 (KXJ76_26835) 95956..96318 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
KXJ76_RS26840 (KXJ76_26840) 96336..98087 + 1752 WP_040118429.1 arsenite efflux transporter ATPase subunit ArsA -
KXJ76_RS26845 (KXJ76_26845) 98136..99425 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
KXJ76_RS26850 (KXJ76_26850) 99438..99863 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
KXJ76_RS26855 (KXJ76_26855) 99894..100160 - 267 WP_102047566.1 ArsA-related P-loop ATPase -
KXJ76_RS26860 (KXJ76_26860) 100234..100938 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KXJ76_RS27385 100993..101091 - 99 Protein_112 recombinase family protein -
KXJ76_RS26865 (KXJ76_26865) 101252..104260 + 3009 WP_004118541.1 Tn3 family transposase ISEc63 Transposase
KXJ76_RS26870 (KXJ76_26870) 104444..105271 + 828 WP_012637488.1 Glutamine transport ATP-binding protein GlnQ VF
KXJ76_RS26875 (KXJ76_26875) 105268..106131 + 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
KXJ76_RS26880 (KXJ76_26880) 106140..106967 + 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
KXJ76_RS26885 (KXJ76_26885) 106976..107986 + 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
KXJ76_RS26890 (KXJ76_26890) 107980..108849 + 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
KXJ76_RS26895 (KXJ76_26895) 108957..109476 + 520 Protein_119 IS5 family transposase ISPst7 Transposase
KXJ76_RS26900 (KXJ76_26900) 110058..111038 - 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
KXJ76_RS26905 (KXJ76_26905) 111154..111906 + 753 Protein_121 IS3 family transposase ISKpn38 Transposase
KXJ76_RS27475 112115..112246 - 132 WP_004218042.1 hypothetical protein -
KXJ76_RS26910 (KXJ76_26910) 112407..113753 - 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
KXJ76_RS26915 (KXJ76_26915) 113965..114447 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
KXJ76_RS26920 (KXJ76_26920) 114435..114701 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
KXJ76_RS26925 (KXJ76_26925) 114971..115759 + 789 WP_077255422.1 hypothetical protein -
KXJ76_RS26930 (KXJ76_26930) 115705..116409 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KXJ76_RS26935 (KXJ76_26935) 116503..117003 - 501 WP_003100856.1 hypothetical protein -
KXJ76_RS26940 (KXJ76_26940) 117000..117326 - 327 WP_006812576.1 hypothetical protein -
KXJ76_RS26945 (KXJ76_26945) 117581..117937 - 357 WP_003465043.1 cupin domain-containing protein -
KXJ76_RS26950 (KXJ76_26950) 117927..118328 - 402 WP_001293886.1 DUF86 domain-containing protein -
KXJ76_RS26955 (KXJ76_26955) 118325..118615 - 291 WP_001247892.1 nucleotidyltransferase -
KXJ76_RS26960 (KXJ76_26960) 118774..121658 + 2885 Protein_133 Tn3 family transposase TnpA_ISPa38 Transposase
KXJ76_RS26965 (KXJ76_26965) 121695..122972 + 1278 WP_064794005.1 arsenic transporter -
KXJ76_RS26970 (KXJ76_26970) 123022..123450 + 429 WP_001549888.1 glutaredoxin-dependent arsenate reductase -
KXJ76_RS26975 (KXJ76_26975) 123508..124221 - 714 WP_025801347.1 arsenical resistance protein ArsH -
KXJ76_RS26980 (KXJ76_26980) 124227..124559 - 333 WP_001549890.1 metalloregulator ArsR/SmtB family transcription factor -
KXJ76_RS26985 (KXJ76_26985) 125020..125328 + 309 Protein_138 IS5 family transposase ISThi1 Transposase
KXJ76_RS26990 (KXJ76_26990) 125534..125644 - 111 Protein_139 IS6 family transposase IS15DI Transposase
KXJ76_RS26995 (KXJ76_26995) 125710..126414 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KXJ76_RS27000 (KXJ76_27000) 126486..126974 + 489 Protein_141 IS110 family transposase ISKpn2 Transposase
KXJ76_RS27005 (KXJ76_27005) 127200..127313 - 114 Protein_142 IS3 family transposase ISSen4 Transposase
KXJ76_RS27010 (KXJ76_27010) 127583..128536 + 954 WP_001198018.1 cation diffusion facilitator family transporter -
KXJ76_RS27015 (KXJ76_27015) 128648..129022 + 375 WP_011977761.1 cytochrome b562 -
KXJ76_RS27020 (KXJ76_27020) 129460..130041 + 582 WP_011977760.1 cytochrome b/b6 domain-containing protein -
KXJ76_RS27025 (KXJ76_27025) 130177..130866 + 690 WP_016240364.1 VIT family protein -
KXJ76_RS27030 (KXJ76_27030) 131009..131320 - 312 WP_011977758.1 hypothetical protein -
KXJ76_RS27035 (KXJ76_27035) 131493..131657 + 165 Protein_148 IS3 family transposase ISEcl1 Transposase
KXJ76_RS27040 (KXJ76_27040) 132015..133025 - 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
KXJ76_RS27390 133368..133450 + 83 Protein_150 hypothetical protein -
KXJ76_RS27045 (KXJ76_27045) 133486..134568 + 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
KXJ76_RS27050 (KXJ76_27050) 134690..137764 + 3075 WP_032427316.1 beta-galactosidase -
KXJ76_RS27055 (KXJ76_27055) 137816..139069 + 1254 WP_004118826.1 lactose permease -
KXJ76_RS27060 (KXJ76_27060) 139135..139275 + 141 Protein_154 galactoside O-acetyltransferase -
KXJ76_RS27065 (KXJ76_27065) 139290..139984 - 695 Protein_155 IS1 family transposase -
KXJ76_RS27070 (KXJ76_27070) 140035..140184 - 150 Protein_156 creatininase family protein -
KXJ76_RS27075 (KXJ76_27075) 140360..142093 - 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
KXJ76_RS27080 (KXJ76_27080) 142101..143048 - 948 WP_004118225.1 acetamidase/formamidase family protein -
KXJ76_RS27085 (KXJ76_27085) 143093..144697 - 1605 WP_024196104.1 ABC transporter substrate-binding protein -
KXJ76_RS27090 (KXJ76_27090) 144710..145630 - 921 WP_004118837.1 ABC transporter permease -
KXJ76_RS27095 (KXJ76_27095) 145630..146478 - 849 WP_219173729.1 ABC transporter permease -
KXJ76_RS27100 (KXJ76_27100) 146475..147068 - 594 WP_004118229.1 ANTAR domain-containing protein -
KXJ76_RS27105 (KXJ76_27105) 147065..148192 - 1128 WP_004118840.1 transporter substrate-binding protein -
KXJ76_RS27395 148477..148578 - 102 Protein_164 IS3 family transposase IS1400 Transposase
KXJ76_RS27400 148991..149179 - 189 Protein_165 DUF2913 family protein -
KXJ76_RS27115 (KXJ76_27115) 149645..150571 + 927 WP_004118843.1 IS110 family transposase IS1663 Transposase
KXJ76_RS27120 (KXJ76_27120) 151248..157139 + 5892 WP_004118855.1 DUF3320 domain-containing protein -
KXJ76_RS27125 (KXJ76_27125) 158530..159336 - 807 WP_044348844.1 incFII family plasmid replication initiator RepA -
KXJ76_RS27405 159395..159439 - 45 Protein_169 hypothetical protein -
KXJ76_RS27410 159421..159580 - 160 Protein_170 protein CopA/IncA -
KXJ76_RS27135 (KXJ76_27135) 159682..159951 - 270 WP_040118434.1 replication regulatory protein RepA -
KXJ76_RS27140 (KXJ76_27140) 160092..160658 - 567 WP_051800686.1 Phospholipase D VF
KXJ76_RS27145 (KXJ76_27145) 160665..160868 - 204 Protein_173 DUF2726 domain-containing protein -
KXJ76_RS27150 (KXJ76_27150) 160899..162296 - 1398 Protein_174 Tn3 family transposase TnpA_TnEc1 Transposase
KXJ76_RS27155 (KXJ76_27155) 162285..162563 + 279 Protein_175 IS3 family transposase ISEc14 Transposase
KXJ76_RS27160 (KXJ76_27160) 162766..163575 - 810 WP_004118865.1 N-formylglutamate deformylase -
KXJ76_RS27165 (KXJ76_27165) 163568..164776 - 1209 WP_004118868.1 imidazolonepropionase -
KXJ76_RS27170 (KXJ76_27170) 164788..166179 - 1392 WP_004118873.1 cytosine permease -
KXJ76_RS27175 (KXJ76_27175) 166232..167012 - 781 WP_219173731.1 urocanate hydratase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance