MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP079735 Location: 1108899..1140779 Organism: Escherichia coli strain GB2005 Replicon: chromosome
Accession: NZ_CP079735 Location: 1108899..1140779 Organism: Escherichia coli strain GB2005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYX12_RS05350 (1105083) | 1105083..1106351 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| KYX12_RS05355 (1106371) | 1106371..1107348 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| KYX12_RS05360 (1107684) | 1107684..1109936 | - | 2253 | Protein_1048 | alpha-amylase family glycosyl hydrolase | - |
| KYX12_RS05370 (1111322) | 1111322..1112695 | + | 1374 | Protein_1049 | DUF5507 domain-containing protein | - |
| KYX12_RS05375 (1113041) | 1113041..1113199 | + | 159 | Protein_1050 | recombinase family protein | - |
| KYX12_RS05380 (1113423) | 1113423..1113542 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| KYX12_RS05385 (1113607) | 1113607..1118187 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| KYX12_RS05390 (1118551) | 1118551..1118880 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| KYX12_RS05395 (1118901) | 1118901..1119218 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KYX12_RS05400 (1119256) | 1119256..1119456 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| KYX12_RS05405 (1119465) | 1119465..1119947 | - | 483 | WP_001407480.1 | RadC family protein | - |
| KYX12_RS05410 (1119956) | 1119956..1120414 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| KYX12_RS05415 (1120517) | 1120517..1120701 | - | 185 | Protein_1058 | DUF905 domain-containing protein | - |
| KYX12_RS05420 (1121312) | 1121312..1123015 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| KYX12_RS05425 (1123157) | 1123157..1124166 | + | 1010 | Protein_1060 | arsenic transporter | - |
| KYX12_RS22165 (1124179) | 1124179..1124331 | + | 153 | Protein_1061 | arsenate reductase | - |
| KYX12_RS05435 (1124718) | 1124718..1125185 | - | 468 | WP_000702495.1 | protein YfjT | - |
| KYX12_RS05440 (1125209) | 1125209..1125652 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| KYX12_RS05445 (1125652) | 1125652..1125888 | - | 237 | WP_001144029.1 | protein YpjK | - |
| KYX12_RS05450 (1125929) | 1125929..1126630 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| KYX12_RS05455 (1126847) | 1126847..1127668 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| KYX12_RS05460 (1127760) | 1127760..1128623 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| KYX12_RS05465 (1128978) | 1128978..1129349 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| KYX12_RS05470 (1129342) | 1129342..1130415 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| KYX12_RS05475 (1130557) | 1130557..1130820 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| KYX12_RS05480 (1131180) | 1131180..1132796 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| KYX12_RS05485 (1132793) | 1132793..1134982 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| KYX12_RS05490 (1135160) | 1135160..1135786 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| KYX12_RS05495 (1135939) | 1135939..1137348 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| KYX12_RS05500 (1137477) | 1137477..1137689 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| KYX12_RS05505 (1137733) | 1137733..1138689 | + | 957 | WP_000510827.1 | protein YfjH | - |
| KYX12_RS05510 (1138933) | 1138933..1140174 | - | 1242 | WP_000101722.1 | hypothetical protein ; Integrase | Integrase |
| KYX12_RS05520 (1140955) | 1140955..1141437 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| KYX12_RS05525 (1141608) | 1141608..1142045 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| KYX12_RS05530 (1142035) | 1142035..1142325 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| KYX12_RS05535 (1142387) | 1142387..1142728 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| KYX12_RS05540 (1142877) | 1142877..1144538 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| KYX12_RS05545 (1144624) | 1144624..1145502 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |