MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69043 bp
Accession: NZ_CP076711 Location: 1..69043 Organism: Escherichia coli O158:H23 strain CFIAFB20140388 Replicon: plasmid unnamed2
Accession: NZ_CP076711 Location: 1..69043 Organism: Escherichia coli O158:H23 strain CFIAFB20140388 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQ220_RS24330 (36) | 36..227 | - | 192 | WP_106907018.1 | hypothetical protein | - |
| KQ220_RS24335 (224) | 224..646 | - | 423 | WP_106907019.1 | DUF1380 family protein | - |
| KQ220_RS24340 (693) | 693..1118 | - | 426 | WP_088536044.1 | antirestriction protein | - |
| KQ220_RS24345 (1586) | 1586..2488 | - | 903 | WP_106907041.1 | DUF1281 domain-containing protein | - |
| KQ220_RS24350 (2906) | 2906..3085 | + | 180 | WP_097469859.1 | impC protein | - |
| KQ220_RS24355 (3169) | 3169..3561 | - | 393 | WP_000272016.1 | plasmid partitioning/stability family protein | - |
| KQ220_RS24360 (3565) | 3565..4539 | - | 975 | WP_097469860.1 | plasmid segregation protein ParM | - |
| KQ220_RS24365 (4779) | 4779..5153 | - | 375 | WP_106907023.1 | hypothetical protein | - |
| KQ220_RS24370 (5153) | 5153..5785 | - | 633 | WP_000312330.1 | ParA family protein | - |
| KQ220_RS24375 (6541) | 6541..7296 | - | 756 | WP_000807692.1 | replication initiation protein RepE | - |
| KQ220_RS24380 (7799) | 7799..8069 | - | 271 | Protein_10 | tyrosine-type recombinase/integrase | - |
| KQ220_RS24385 (8070) | 8070..8375 | - | 306 | WP_106907027.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KQ220_RS24390 (8377) | 8377..8595 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KQ220_RS24395 (8988) | 8988..9371 | - | 384 | Protein_13 | Tn3 family transposase | - |
| KQ220_RS24400 (9479) | 9479..9853 | - | 375 | Protein_14 | transposase zinc-binding domain-containing protein | - |
| KQ220_RS24405 (9808) | 9808..10056 | - | 249 | WP_158709094.1 | hypothetical protein | - |
| KQ220_RS24410 (10202) | 10202..10458 | + | 257 | Protein_16 | IS3 family transposase | - |
| KQ220_RS24415 (10709) | 10709..11575 | - | 867 | WP_225932707.1 | AraC family transcriptional regulator | - |
| KQ220_RS24420 (12591) | 12591..12839 | + | 249 | WP_216781571.1 | hypothetical protein | - |
| KQ220_RS24425 (12990) | 12990..13648 | + | 659 | Protein_19 | transposase | - |
| KQ220_RS24430 (13912) | 13912..14277 | - | 366 | WP_158709096.1 | hypothetical protein | - |
| KQ220_RS24435 (14978) | 14978..15678 | + | 701 | Protein_21 | transposase | - |
| KQ220_RS24440 (15797) | 15797..15883 | + | 87 | Protein_22 | IS200/IS605 family transposase | - |
| KQ220_RS24445 (15946) | 15946..16511 | + | 566 | Protein_23 | IS3-like element ISEc16 family transposase | - |
| KQ220_RS24450 (16579) | 16579..17361 | - | 783 | WP_001317493.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| KQ220_RS24455 (17358) | 17358..18380 | - | 1023 | WP_000255956.1 | IS21-like element IS100 family transposase | - |
| KQ220_RS24460 (18468) | 18468..19055 | + | 588 | Protein_26 | IS3-like element ISEc16 family transposase | - |
| KQ220_RS24465 (19099) | 19099..19437 | + | 339 | Protein_27 | IS200/IS605 family transposase | - |
| KQ220_RS24470 (19504) | 19504..19953 | + | 450 | Protein_28 | DDE-type integrase/transposase/recombinase | - |
| KQ220_RS24475 (20035) | 20035..20281 | - | 247 | Protein_29 | IS3 family transposase | - |
| KQ220_RS24480 (20291) | 20291..20920 | - | 630 | WP_106906983.1 | ABC transporter ATP-binding protein | - |
| KQ220_RS24485 (20913) | 20913..21410 | - | 498 | WP_225932708.1 | HlyD family secretion protein | - |
| KQ220_RS25470 (22033) | 22033..22311 | - | 279 | WP_225932709.1 | hypothetical protein | - |
| KQ220_RS25475 (23326) | 23326..23796 | - | 471 | WP_225932710.1 | hypothetical protein | - |
| KQ220_RS24500 (24521) | 24521..25710 | - | 1190 | Protein_34 | IS3 family transposase | - |
| KQ220_RS24505 (25986) | 25986..26681 | + | 696 | Protein_35 | helix-turn-helix domain-containing protein | - |
| KQ220_RS24510 (26707) | 26707..26967 | - | 261 | Protein_36 | IS3 family transposase | - |
| KQ220_RS24515 (29074) | 29074..29658 | + | 585 | WP_225932711.1 | helix-turn-helix transcriptional regulator | - |
| KQ220_RS24520 (30059) | 30059..30758 | + | 700 | Protein_38 | IS3 family transposase | - |
| KQ220_RS24525 (30909) | 30909..31439 | - | 531 | WP_216781572.1 | hypothetical protein | - |
| KQ220_RS24530 (31543) | 31543..31875 | - | 333 | WP_216781573.1 | hypothetical protein | - |
| KQ220_RS24535 (31996) | 31996..32580 | - | 585 | WP_216781575.1 | hypothetical protein | - |
| KQ220_RS24540 (32570) | 32570..33160 | - | 591 | WP_216781576.1 | hypothetical protein | - |
| KQ220_RS24545 (33169) | 33169..33759 | - | 591 | WP_225932712.1 | hypothetical protein | - |
| KQ220_RS24550 (33823) | 33823..34236 | - | 414 | WP_106906974.1 | lytic transglycosylase domain-containing protein | - |
| KQ220_RS24555 (34224) | 34224..34895 | - | 672 | WP_229380344.1 | A24 family peptidase | - |
| KQ220_RS24560 (34960) | 34960..35940 | - | 981 | WP_216781559.1 | ATPase, T2SS/T4P/T4SS family | - |
| KQ220_RS24565 (35947) | 35947..37011 | - | 1065 | WP_106906971.1 | type II secretion system F family protein | - |
| KQ220_RS24570 (37018) | 37018..38598 | - | 1581 | WP_106906970.1 | ATPase, T2SS/T4P/T4SS family | - |
| KQ220_RS24575 (38605) | 38605..39132 | - | 528 | WP_106906969.1 | hypothetical protein | - |
| KQ220_RS24580 (39135) | 39135..40379 | - | 1245 | WP_158709090.1 | hypothetical protein | - |
| KQ220_RS24585 (40381) | 40381..42060 | - | 1680 | WP_106906967.1 | secretin N-terminal domain-containing protein | - |
| KQ220_RS24590 (42072) | 42072..42533 | - | 462 | WP_216781561.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| KQ220_RS24595 (42568) | 42568..43251 | - | 684 | WP_267876758.1 | type 4 pilus major pilin | - |
| KQ220_RS24600 (43704) | 43704..44870 | + | 1167 | Protein_54 | IS3 family transposase | - |
| KQ220_RS24605 (45866) | 45866..46192 | + | 327 | WP_225932704.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| KQ220_RS24610 (46182) | 46182..46994 | + | 813 | WP_225932705.1 | hypothetical protein | - |
| KQ220_RS24615 (47170) | 47170..47628 | + | 459 | WP_000526135.1 | IS200/IS605-like element IS200C family transposase | - |
| KQ220_RS24620 (47738) | 47738..48190 | - | 453 | WP_106906985.1 | acyltransferase | - |
| KQ220_RS24625 (48518) | 48518..48778 | + | 261 | WP_216781562.1 | hypothetical protein | - |
| KQ220_RS24630 (48775) | 48775..49362 | + | 588 | Protein_60 | hypothetical protein | - |
| KQ220_RS24635 (49384) | 49384..49683 | - | 300 | Protein_61 | DUF6404 family protein | - |
| KQ220_RS25480 (50200) | 50200..52057 | - | 1858 | Protein_62 | colicin-like pore-forming protein | - |
| KQ220_RS24655 (52907) | 52907..53311 | - | 405 | WP_000154256.1 | DUF2251 domain-containing protein | - |
| KQ220_RS24660 (53481) | 53481..53768 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KQ220_RS24665 (53765) | 53765..54016 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KQ220_RS24670 (54986) | 54986..55843 | - | 858 | WP_158709091.1 | incFII family plasmid replication initiator RepA | - |
| KQ220_RS25490 (55862) | 55862..56038 | - | 177 | Protein_67 | protein CopA/IncA | - |
| KQ220_RS24680 (56141) | 56141..56398 | - | 258 | WP_106906995.1 | replication regulatory protein RepA | - |
| KQ220_RS24685 (56682) | 56682..56831 | - | 150 | WP_106906997.1 | Hok/Gef family protein | Toxin Detail |
| - (56876) | 56876..56935 | + | 60 | NuclAT_0 | - | - |
| - (56876) | 56876..56935 | + | 60 | NuclAT_0 | - | - |
| - (56876) | 56876..56935 | + | 60 | NuclAT_0 | - | - |
| - (56876) | 56876..56935 | + | 60 | NuclAT_0 | - | - |
| KQ220_RS24690 (57101) | 57101..59245 | - | 2145 | WP_106907000.1 | peptidase domain-containing ABC transporter | - |
| KQ220_RS24695 (59242) | 59242..59619 | - | 378 | WP_216781565.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| KQ220_RS24700 (59619) | 59619..60521 | - | 903 | WP_216781566.1 | biotin/lipoyl-binding protein | - |
| KQ220_RS24705 (60900) | 60900..61475 | - | 576 | WP_106907004.1 | hypothetical protein | - |
| KQ220_RS24710 (61983) | 61983..62281 | + | 299 | Protein_74 | transposase | - |
| KQ220_RS24715 (62280) | 62280..62402 | - | 123 | Protein_75 | endonuclease | - |
| KQ220_RS24720 (62649) | 62649..62861 | - | 213 | WP_106907006.1 | hypothetical protein | - |
| KQ220_RS24725 (62995) | 62995..63558 | - | 564 | Protein_77 | fertility inhibition protein FinO | - |
| KQ220_RS24730 (63613) | 63613..64094 | - | 482 | Protein_78 | type-F conjugative transfer system pilin acetylase TraX | - |
| KQ220_RS24735 (64136) | 64136..65347 | + | 1212 | WP_216781567.1 | IS3-like element ISEc31 family transposase | - |
| KQ220_RS24740 (65355) | 65355..65492 | - | 138 | Protein_80 | conjugal transfer protein TraB | - |
| KQ220_RS24745 (65492) | 65492..66211 | - | 720 | WP_216781568.1 | type-F conjugative transfer system secretin TraK | - |
| KQ220_RS24750 (66198) | 66198..66764 | - | 567 | WP_106907011.1 | type IV conjugative transfer system protein TraE | - |
| KQ220_RS24755 (66786) | 66786..67097 | - | 312 | WP_000012112.1 | type IV conjugative transfer system protein TraL | - |
| KQ220_RS24760 (67112) | 67112..67476 | - | 365 | Protein_84 | type IV conjugative transfer system pilin TraA | - |
| KQ220_RS24765 (67525) | 67525..67734 | - | 210 | WP_096959094.1 | conjugal transfer relaxosome protein TraY | - |
| KQ220_RS24770 (67853) | 67853..68491 | - | 639 | WP_216781570.1 | conjugal transfer protein TrbJ | - |
| KQ220_RS24775 (68695) | 68695..69033 | - | 339 | WP_216781579.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|