MGE detailed information
MGE type: Conjugative plasmid MGE length: 145019 bp
Accession: NZ_CP076265 Location: 1..145019 Organism: Escherichia coli strain NADC1036 Replicon: plasmid pNADC1036IncF
Accession: NZ_CP076265 Location: 1..145019 Organism: Escherichia coli strain NADC1036 Replicon: plasmid pNADC1036IncF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7A17_RS23890 (326) | 326..1864 | + | 1539 | WP_257117838.1 | IS66 family transposase ISEc8 | Transposase |
| A7A17_RS23895 (1976) | 1976..2161 | - | 186 | Protein_2 | hypothetical protein | - |
| A7A17_RS23900 (2180) | 2180..2344 | - | 165 | Protein_3 | IS110 family transposase | - |
| A7A17_RS23905 (2460) | 2460..3005 | - | 546 | WP_000825549.1 | hypothetical protein | VF |
| A7A17_RS23910 (3020) | 3020..3829 | - | 810 | WP_000759934.1 | Cytolethal distending toxin subunit B | VF |
| A7A17_RS23915 (3826) | 3826..4602 | - | 777 | WP_000182209.1 | Cytolethal distending toxin subunit A | VF |
| A7A17_RS23920 (5176) | 5176..5314 | + | 139 | Protein_7 | post-segregation killing protein PndC | - |
| A7A17_RS23925 (5606) | 5606..5923 | - | 318 | Protein_8 | IS21 family transposase IS21 | Transposase |
| A7A17_RS23935 (7179) | 7179..7418 | - | 240 | Protein_10 | DDE-type integrase/transposase/recombinase | - |
| A7A17_RS23940 (7609) | 7609..7819 | - | 211 | Protein_11 | transcriptional regulator | - |
| A7A17_RS23945 (8363) | 8363..8623 | - | 261 | WP_257117856.1 | helix-turn-helix domain-containing protein | - |
| A7A17_RS23950 (9813) | 9813..10250 | + | 438 | Protein_13 | (Fe-S)-binding protein | - |
| A7A17_RS23955 (10310) | 10310..10848 | - | 539 | Protein_14 | IS21 family transposase | - |
| A7A17_RS23960 (11133) | 11133..14177 | - | 3045 | WP_257117842.1 | Dermonecrotic toxin | VF |
| A7A17_RS23965 (14314) | 14314..14775 | - | 462 | Protein_16 | IS3 family transposase | - |
| A7A17_RS23970 (14856) | 14856..16242 | - | 1387 | Protein_17 | reverse transcriptase domain-containing protein | - |
| A7A17_RS23975 (16984) | 16984..17492 | - | 509 | Protein_18 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| A7A17_RS23980 (18759) | 18759..19001 | - | 243 | Protein_19 | transposase | - |
| A7A17_RS23985 (19060) | 19060..19475 | + | 416 | Protein_20 | IS3 family transposase ISKpn37 | Transposase |
| A7A17_RS23990 (19608) | 19608..20183 | - | 576 | Protein_21 | ISL3 family transposase ISEc38 | Transposase |
| A7A17_RS23995 (20256) | 20256..20513 | + | 258 | Protein_22 | IS3 family transposase IS911 | Transposase |
| A7A17_RS24000 (20581) | 20581..21732 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| A7A17_RS24005 (21744) | 21744..22643 | + | 900 | Protein_24 | IS3 family transposase IS911 | Transposase |
| A7A17_RS24010 (23196) | 23196..23447 | + | 252 | WP_001315600.1 | HTH domain-containing protein | - |
| A7A17_RS24015 (23843) | 23843..23998 | - | 156 | Protein_26 | IS110 family transposase | - |
| A7A17_RS24020 (24339) | 24339..25286 | - | 948 | WP_001253824.1 | DMT family transporter | - |
| A7A17_RS24030 (26087) | 26087..27101 | - | 1015 | Protein_28 | integrase core domain-containing protein | - |
| A7A17_RS24035 (27502) | 27502..28533 | + | 1032 | Protein_29 | IS3 family transposase | - |
| A7A17_RS24040 (28836) | 28836..29684 | + | 849 | WP_085457281.1 | Right origin-binding protein | VF |
| A7A17_RS24045 (30094) | 30094..30370 | + | 277 | Protein_31 | transposase | - |
| A7A17_RS24050 (30538) | 30538..30792 | - | 255 | WP_172836919.1 | hypothetical protein | - |
| A7A17_RS24055 (31116) | 31116..36089 | - | 4974 | WP_116968050.1 | putative autotransporter | VF |
| A7A17_RS24060 (36082) | 36082..37302 | - | 1221 | WP_000040077.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| A7A17_RS24065 (37820) | 37820..39357 | - | 1538 | Protein_35 | IS66 family transposase ISEc8 | Transposase |
| A7A17_RS24070 (39407) | 39407..39754 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| A7A17_RS24075 (39751) | 39751..40131 | - | 381 | WP_063069769.1 | IS66 family transposase ISEc8 | Transposase |
| A7A17_RS24080 (40245) | 40245..40400 | + | 156 | Protein_38 | transposase | - |
| A7A17_RS24085 (40475) | 40475..41239 | - | 765 | WP_000717590.1 | putative fimbrial chaperone YadV | VF |
| A7A17_RS24090 (41241) | 41241..42524 | - | 1284 | WP_050437769.1 | fimbrial protein | - |
| A7A17_RS24095 (42544) | 42544..45063 | - | 2520 | WP_000723943.1 | Outer membrane usher protein HtrE | VF |
| A7A17_RS24100 (45065) | 45065..45760 | - | 696 | WP_000945637.1 | molecular chaperone | - |
| A7A17_RS24105 (45834) | 45834..46358 | - | 525 | WP_012775885.1 | S-fimbrial protein subunit SfaA | VF |
| A7A17_RS24110 (47318) | 47318..47770 | - | 453 | WP_000794564.1 | hypothetical protein | - |
| A7A17_RS24115 (47770) | 47770..48261 | - | 492 | WP_225403467.1 | hypothetical protein | - |
| A7A17_RS24120 (49163) | 49163..49450 | - | 288 | WP_000865085.1 | helix-turn-helix transcriptional regulator | - |
| A7A17_RS24125 (49450) | 49450..49761 | - | 312 | WP_000483535.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A7A17_RS24130 (49867) | 49867..50007 | - | 141 | WP_001315588.1 | hypothetical protein | - |
| A7A17_RS24135 (50708) | 50708..51565 | - | 858 | WP_000131011.1 | incFII family plasmid replication initiator RepA | - |
| A7A17_RS24140 (51558) | 51558..51632 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A7A17_RS24145 (51681) | 51681..51806 | + | 126 | WP_094259391.1 | replication protein RepA | - |
| A7A17_RS24150 (51879) | 51879..52127 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| A7A17_RS24155 (52411) | 52411..52560 | - | 150 | WP_001300273.1 | Hok/Gef family protein | Toxin Detail |
| - (52604) | 52604..52665 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (52604) | 52604..52665 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (52604) | 52604..52665 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (52604) | 52604..52665 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| A7A17_RS24160 (52840) | 52840..52974 | - | 135 | WP_001058542.1 | hypothetical protein | - |
| A7A17_RS24165 (53325) | 53325..53786 | - | 462 | WP_000760079.1 | thermonuclease family protein | - |
| A7A17_RS24170 (54530) | 54530..54733 | - | 204 | WP_040073114.1 | hypothetical protein | - |
| A7A17_RS24175 (54888) | 54888..55445 | - | 558 | WP_047649932.1 | fertility inhibition protein FinO | - |
| A7A17_RS24180 (55548) | 55548..56408 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| A7A17_RS24185 (56467) | 56467..57207 | - | 741 | WP_094259392.1 | conjugal transfer pilus acetylase TraX | - |
| A7A17_RS24190 (57227) | 57227..62497 | - | 5271 | WP_257117853.1 | Multifunctional conjugation protein TraI | Relaxase |
| A7A17_RS24195 (62579) | 62579..62806 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| A7A17_RS24200 (62806) | 62806..63204 | + | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7A17_RS24205 (63213) | 63213..65366 | - | 2154 | WP_001603683.1 | type IV conjugative transfer system coupling protein TraD | - |
| A7A17_RS24210 (65618) | 65618..66328 | - | 711 | WP_230016160.1 | conjugal transfer complement resistance protein TraT | - |
| A7A17_RS24215 (66363) | 66363..66872 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| A7A17_RS24220 (66869) | 66869..69694 | - | 2826 | WP_041124241.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| A7A17_RS24225 (69691) | 69691..71064 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| A7A17_RS24230 (71051) | 71051..71443 | - | 393 | WP_244565502.1 | F-type conjugal transfer protein TrbF | - |
| A7A17_RS24235 (71430) | 71430..71771 | - | 342 | WP_001406994.1 | P-type conjugative transfer protein TrbJ | - |
| A7A17_RS24240 (71701) | 71701..72246 | - | 546 | WP_089568516.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A7A17_RS24245 (72233) | 72233..72517 | - | 285 | WP_000624103.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A7A17_RS24250 (72598) | 72598..72873 | + | 276 | WP_001513501.1 | hypothetical protein | - |
| A7A17_RS24255 (72875) | 72875..73222 | - | 348 | WP_032341883.1 | conjugal transfer protein TrbA | - |
| A7A17_RS24260 (73238) | 73238..73981 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A7A17_RS24265 (73974) | 73974..74231 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| A7A17_RS24270 (74258) | 74258..76066 | - | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A7A17_RS24275 (76063) | 76063..76701 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A7A17_RS24280 (76710) | 76710..77702 | - | 993 | WP_041124240.1 | conjugal transfer pilus assembly protein TraU | - |
| A7A17_RS24285 (77699) | 77699..78331 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| A7A17_RS24290 (78328) | 78328..78714 | - | 387 | WP_032082946.1 | type-F conjugative transfer system protein TrbI | - |
| A7A17_RS24295 (78711) | 78711..81338 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| A7A17_RS24300 (81498) | 81498..81719 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| A7A17_RS24305 (81854) | 81854..82369 | - | 516 | WP_089568515.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A7A17_RS24310 (82366) | 82366..82617 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| A7A17_RS24315 (82629) | 82629..82826 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| A7A17_RS24320 (82813) | 82813..83403 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| A7A17_RS24325 (83393) | 83393..84820 | - | 1428 | WP_089568514.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| A7A17_RS24330 (84820) | 84820..85548 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| A7A17_RS24335 (85535) | 85535..86101 | - | 567 | WP_057108830.1 | type IV conjugative transfer system protein TraE | - |
| A7A17_RS24340 (86123) | 86123..86434 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A7A17_RS24345 (86449) | 86449..86814 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| A7A17_RS24350 (86848) | 86848..87075 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| A7A17_RS24355 (87169) | 87169..87855 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| A7A17_RS24360 (88045) | 88045..88428 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A7A17_RS24365 (88705) | 88705..89352 | + | 648 | WP_122985450.1 | hypothetical protein | VF |
| A7A17_RS24370 (89648) | 89648..90469 | - | 822 | Protein_96 | DUF945 domain-containing protein | - |
| A7A17_RS24375 (90590) | 90590..90877 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| A7A17_RS24380 (90902) | 90902..91108 | - | 207 | WP_089649215.1 | single-stranded DNA-binding protein | - |
| A7A17_RS24385 (91178) | 91178..91348 | + | 171 | Protein_99 | hypothetical protein | - |
| A7A17_RS24390 (91349) | 91349..91579 | - | 231 | WP_071998556.1 | hypothetical protein | - |
| A7A17_RS24395 (91799) | 91799..91924 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A7A17_RS24400 (91866) | 91866..92015 | - | 150 | Protein_102 | plasmid maintenance protein Mok | - |
| - (92001) | 92001..92225 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (92001) | 92001..92225 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (92001) | 92001..92225 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (92001) | 92001..92225 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| A7A17_RS24405 (92037) | 92037..92225 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| A7A17_RS24410 (92194) | 92194..92956 | - | 763 | Protein_104 | plasmid SOS inhibition protein A | - |
| A7A17_RS24415 (92953) | 92953..93387 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| A7A17_RS24420 (93442) | 93442..95400 | - | 1959 | WP_257117817.1 | ParB/RepB/Spo0J family partition protein | - |
| A7A17_RS24425 (95466) | 95466..95699 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| A7A17_RS24430 (95762) | 95762..96301 | - | 540 | WP_000290838.1 | single-stranded DNA-binding protein | - |
| A7A17_RS24435 (96327) | 96327..96533 | - | 207 | WP_024190028.1 | hypothetical protein | - |
| A7A17_RS24440 (96774) | 96774..97010 | - | 237 | WP_077786645.1 | hypothetical protein | - |
| A7A17_RS24445 (96944) | 96944..97135 | - | 192 | WP_061336218.1 | hypothetical protein | - |
| A7A17_RS24450 (97161) | 97161..97724 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| A7A17_RS24455 (97772) | 97772..99133 | - | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| A7A17_RS24460 (99185) | 99185..99415 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| A7A17_RS24465 (100336) | 100336..100827 | - | 492 | WP_047090239.1 | DUF1380 family protein | - |
| A7A17_RS24470 (100827) | 100827..101252 | - | 426 | WP_001198893.1 | antirestriction protein | - |
| A7A17_RS24475 (101666) | 101666..102441 | - | 776 | Protein_117 | hypothetical protein | - |
| A7A17_RS24480 (102486) | 102486..102953 | - | 468 | WP_223718850.1 | DUF1380 family protein | - |
| A7A17_RS24485 (102934) | 102934..103155 | - | 222 | WP_000558823.1 | hypothetical protein | - |
| A7A17_RS24490 (103156) | 103156..103839 | - | 684 | WP_089568607.1 | DNA methylase | - |
| A7A17_RS24495 (103915) | 103915..104226 | - | 312 | WP_032236158.1 | hypothetical protein | - |
| A7A17_RS24500 (104223) | 104223..105125 | - | 903 | WP_032284999.1 | DUF1281 domain-containing protein | - |
| A7A17_RS24505 (105202) | 105202..106926 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| A7A17_RS24510 (107949) | 107949..108197 | + | 249 | WP_000619113.1 | DinI-like family protein | - |
| A7A17_RS24515 (108194) | 108194..108613 | + | 420 | WP_000109083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A7A17_RS24520 (108603) | 108603..109570 | + | 968 | Protein_126 | translesion error-prone DNA polymerase V subunit UmuC | - |
| A7A17_RS24525 (109572) | 109572..109988 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| A7A17_RS24530 (109981) | 109981..110961 | - | 981 | WP_257117824.1 | plasmid segregation protein ParM | - |
| A7A17_RS24535 (111375) | 111375..111683 | - | 309 | WP_000030206.1 | molecular chaperone GroEL | - |
| A7A17_RS24540 (111770) | 111770..112414 | - | 645 | WP_001144036.1 | ParA family protein | - |
| A7A17_RS24545 (112596) | 112596..113117 | - | 522 | Protein_131 | Tyrosine recombinase XerD | VF |
| A7A17_RS24550 (113360) | 113360..113935 | - | 576 | WP_223718851.1 | hypothetical protein | - |
| A7A17_RS24555 (114133) | 114133..115346 | + | 1214 | WP_167774810.1 | IS3 family transposase IS629 | Transposase |
| A7A17_RS24560 (115518) | 115518..117713 | - | 2196 | WP_001432292.1 | Ferric aerobactin receptor | VF |
| A7A17_RS24565 (117719) | 117719..119056 | - | 1338 | WP_000750141.1 | L-lysine N6-monooxygenase | VF |
| A7A17_RS24570 (119053) | 119053..120795 | - | 1743 | WP_001015709.1 | Aerobactin synthase | VF |
| A7A17_RS24575 (120795) | 120795..121742 | - | 948 | WP_001287497.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| A7A17_RS24580 (121743) | 121743..123467 | - | 1725 | WP_001299620.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| A7A17_RS24585 (123603) | 123603..124796 | + | 1194 | WP_000074481.1 | MFS transporter | - |
| A7A17_RS24590 (125182) | 125182..126179 | + | 998 | Protein_140 | IS3 family transposase IS629 | Transposase |
| A7A17_RS24595 (127541) | 127541..128518 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| A7A17_RS24600 (128803) | 128803..129543 | - | 741 | WP_001066934.1 | tyrosine-type recombinase/integrase | - |
| A7A17_RS24605 (129664) | 129664..129798 | - | 135 | Protein_143 | serine/threonine protein kinase | - |
| A7A17_RS24610 (130300) | 130300..131799 | - | 1500 | WP_001263872.1 | alpha/beta hydrolase | - |
| A7A17_RS24615 (131892) | 131892..132839 | - | 948 | WP_089568614.1 | Outer membrane protease OmpP | VF |
| A7A17_RS24620 (133861) | 133861..134055 | + | 195 | WP_179627430.1 | IS66 family transposase ISEc8 | Transposase |
| A7A17_RS24625 (134059) | 134059..135615 | - | 1557 | WP_044867545.1 | IS66 family transposase ISSfl3 | Transposase |
| A7A17_RS24630 (135635) | 135635..135982 | - | 348 | WP_000631727.1 | IS66 family transposase ISSfl3 | Transposase |
| A7A17_RS24635 (135979) | 135979..136653 | - | 675 | WP_024251468.1 | IS66 family transposase ISSfl3 | Transposase |
| A7A17_RS24640 (136736) | 136736..137113 | - | 378 | Protein_150 | IS66 family transposase IS679 | Transposase |
| A7A17_RS24645 (137362) | 137362..138393 | - | 1032 | WP_012775842.1 | F17c-G fimbrial adhesin | VF |
| A7A17_RS24650 (138395) | 138395..140863 | - | 2469 | WP_257117835.1 | Outer membrane usher protein HtrE | VF |
| A7A17_RS24655 (140947) | 140947..141669 | - | 723 | WP_000680560.1 | putative fimbrial chaperone YadV | VF |
| A7A17_RS24660 (141737) | 141737..142279 | - | 543 | WP_089649274.1 | Major fimbrial subunit SMF-1 | VF |
| A7A17_RS24665 (142919) | 142919..143074 | - | 156 | WP_089649273.1 | putrescine:ornithine antiporter | - |
| A7A17_RS24670 (143390) | 143390..143573 | + | 184 | Protein_156 | transposase domain-containing protein | - |
| A7A17_RS24675 (143750) | 143750..144496 | + | 747 | WP_089649272.1 | EamA family transporter RarD | - |
| A7A17_RS24680 (144572) | 144572..144952 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|