MGE detailed information
MGE type: Mobilizable plasmid MGE length: 36145 bp
Accession: NZ_CP075668 Location: 1..36145 Organism: Escherichia coli strain STEC2018-553 Replicon: plasmid pSTEC2018_553-c
Accession: NZ_CP075668 Location: 1..36145 Organism: Escherichia coli strain STEC2018-553 Replicon: plasmid pSTEC2018_553-c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFY30_RS28155 (592) | 592..1449 | - | 858 | WP_198789103.1 | incFII family plasmid replication initiator RepA | - |
| JFY30_RS28160 (1442) | 1442..1516 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JFY30_RS28165 (1740) | 1740..2000 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JFY30_RS28170 (2284) | 2284..2433 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (2482) | 2482..2538 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (2482) | 2482..2538 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (2482) | 2482..2538 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - (2482) | 2482..2538 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| JFY30_RS28175 (2713) | 2713..3111 | - | 399 | WP_000675594.1 | hypothetical protein | - |
| JFY30_RS28180 (3199) | 3199..3660 | - | 462 | WP_000760081.1 | thermonuclease family protein | - |
| JFY30_RS28185 (4402) | 4402..4605 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| JFY30_RS28190 (4759) | 4759..5316 | - | 558 | WP_000139316.1 | fertility inhibition protein FinO | - |
| JFY30_RS28195 (5419) | 5419..6279 | - | 861 | WP_000704512.1 | putative protein YcjY | VF |
| JFY30_RS28200 (6338) | 6338..7084 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| JFY30_RS28205 (7104) | 7104..9485 | - | 2382 | Protein_10 | Multifunctional conjugation protein TraI | Relaxase |
| JFY30_RS28210 (9673) | 9673..10860 | - | 1188 | WP_198779709.1 | IS91 family transposase ISEc37 | Transposase |
| JFY30_RS28215 (10860) | 10860..11225 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JFY30_RS28220 (11472) | 11472..11756 | + | 285 | WP_024166087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JFY30_RS28225 (11756) | 11756..12031 | + | 276 | WP_000421251.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFY30_RS28230 (12313) | 12313..13500 | - | 1188 | WP_198779709.1 | IS91 family transposase ISEc37 | Transposase |
| JFY30_RS28235 (13500) | 13500..13865 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JFY30_RS28240 (13871) | 13871..15039 | + | 1169 | Protein_17 | TonB-dependent receptor | - |
| JFY30_RS28245 (15108) | 15108..16283 | + | 1176 | WP_001020415.1 | putative protein YncE | VF |
| JFY30_RS28250 (16913) | 16913..17371 | - | 459 | Protein_19 | IS110 family transposase ISSm1 | Transposase |
| JFY30_RS28255 (17652) | 17652..18349 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| JFY30_RS28260 (18588) | 18588..18974 | - | 387 | WP_000673981.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JFY30_RS28265 (18971) | 18971..19195 | - | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JFY30_RS28270 (19261) | 19261..19616 | + | 356 | Protein_23 | Tn3 family transposase | - |
| JFY30_RS28275 (19850) | 19850..19981 | - | 132 | WP_072023375.1 | colicin 10 lysis protein | - |
| JFY30_RS28280 (20006) | 20006..20296 | + | 291 | WP_215744939.1 | Cki family colicin immunity protein | - |
| JFY30_RS28285 (20433) | 20433..20881 | + | 449 | Protein_26 | colicin immunity protein Cui | - |
| JFY30_RS28290 (20904) | 20904..22400 | - | 1497 | WP_198789129.1 | colicin-like pore-forming protein | - |
| JFY30_RS28295 (22640) | 22640..22930 | + | 291 | WP_000047032.1 | hypothetical protein | - |
| JFY30_RS28300 (22922) | 22922..23200 | - | 279 | WP_000710675.1 | hypothetical protein | - |
| JFY30_RS28305 (23322) | 23322..23744 | + | 423 | WP_021539380.1 | Exc2 family lipoprotein | - |
| JFY30_RS28310 (24139) | 24139..25257 | + | 1119 | WP_032308900.1 | MFS transporter | - |
| JFY30_RS28315 (25254) | 25254..26477 | + | 1224 | WP_024178282.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| JFY30_RS28320 (26548) | 26548..26730 | - | 183 | WP_215744940.1 | hypothetical protein | - |
| JFY30_RS28325 (27162) | 27162..28307 | - | 1146 | WP_000706385.1 | glycerate kinase | - |
| JFY30_RS28330 (28315) | 28315..29583 | - | 1269 | WP_000253684.1 | SLC13 family permease | - |
| JFY30_RS28335 (29703) | 29703..30842 | - | 1140 | WP_001033384.1 | sugar diacid recognition domain-containing protein | - |
| JFY30_RS28340 (31124) | 31124..31479 | - | 356 | Protein_37 | ISKra4 family transposase ISEc51 | Transposase |
| JFY30_RS28345 (31483) | 31483..31845 | - | 363 | Protein_38 | 3'-5' exonuclease | - |
| JFY30_RS28350 (32078) | 32078..32269 | - | 192 | WP_001367332.1 | hypothetical protein | - |
| JFY30_RS28355 (32743) | 32743..33159 | - | 417 | WP_000275620.1 | type II toxin-antitoxin system VapC family toxin | - |
| JFY30_RS28360 (33159) | 33159..33413 | - | 255 | WP_000705662.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| JFY30_RS28365 (33573) | 33573..34040 | + | 468 | WP_001562850.1 | hypothetical protein | - |
| JFY30_RS28370 (34298) | 34298..34492 | + | 195 | WP_001367294.1 | ANR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|