MGE detailed information
MGE type: Conjugative plasmid MGE length: 119130 bp
Accession: NZ_CP075634 Location: 1..119130 Organism: Escherichia coli strain 2018-166 Replicon: plasmid pSTEC2018_166-c
Accession: NZ_CP075634 Location: 1..119130 Organism: Escherichia coli strain 2018-166 Replicon: plasmid pSTEC2018_166-c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX80_RS26325 (JFX80_26340) | 1..873 | + | 873 | WP_001536607.1 | incFII family plasmid replication initiator RepA | - |
| JFX80_RS27485 | 1570..1761 | + | 192 | WP_033810767.1 | hypothetical protein | - |
| JFX80_RS26330 (JFX80_26345) | 1834..2085 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JFX80_RS26335 (JFX80_26350) | 2082..2369 | + | 288 | WP_000222760.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFX80_RS26340 (JFX80_26355) | 2473..3063 | + | 591 | WP_000977350.1 | Serine acetyltransferase | VF |
| JFX80_RS26345 (JFX80_26360) | 3166..3822 | + | 657 | WP_000536048.1 | ProQ/FINO family protein | - |
| JFX80_RS26350 (JFX80_26365) | 3890..4204 | + | 315 | WP_000633742.1 | hypothetical protein | - |
| JFX80_RS26355 (JFX80_26370) | 4592..5779 | - | 1188 | WP_215744912.1 | IS91 family transposase ISEc37 | Transposase |
| JFX80_RS26360 (JFX80_26375) | 5779..6144 | - | 366 | WP_021521282.1 | hypothetical protein | - |
| JFX80_RS26365 (JFX80_26380) | 6491..7190 | - | 700 | Protein_9 | transcriptional regulator NanR | - |
| JFX80_RS26370 (JFX80_26385) | 7636..8529 | + | 894 | WP_000123089.1 | N-acetylneuraminate lyase | - |
| JFX80_RS26375 (JFX80_26390) | 8610..10097 | + | 1488 | WP_001094644.1 | sialate:H+ symport family MFS transporter | - |
| JFX80_RS26380 (JFX80_26395) | 10121..10506 | + | 386 | Protein_12 | hypothetical protein | - |
| JFX80_RS26385 (JFX80_26400) | 10506..10610 | + | 105 | Protein_13 | ROK family protein | - |
| JFX80_RS26390 (JFX80_26405) | 10754..11467 | + | 714 | WP_024178317.1 | oligogalacturonate-specific porin KdgM family protein | - |
| JFX80_RS26395 (JFX80_26410) | 11487..12593 | + | 1107 | WP_062863590.1 | N-acetylneuraminate epimerase | - |
| JFX80_RS26400 (JFX80_26415) | 12640..12840 | - | 201 | Protein_16 | DNA-binding protein | - |
| JFX80_RS26405 (JFX80_26420) | 14033..14284 | + | 252 | WP_000121744.1 | hypothetical protein | Antitoxin Detail |
| JFX80_RS26410 (JFX80_26425) | 14274..14555 | + | 282 | WP_000220566.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JFX80_RS26415 (JFX80_26430) | 14809..16021 | - | 1213 | Protein_19 | IS91 family transposase ISEc37 | Transposase |
| JFX80_RS26420 (JFX80_26435) | 15904..16356 | - | 453 | WP_215744913.1 | hypothetical protein | - |
| JFX80_RS26425 (JFX80_26440) | 16391..16591 | - | 201 | WP_198774796.1 | hypothetical protein | - |
| JFX80_RS26430 (JFX80_26445) | 16920..17372 | + | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| JFX80_RS26435 (JFX80_26450) | 17405..18937 | - | 1533 | WP_032308905.1 | NAD(P)-binding domain-containing protein | - |
| JFX80_RS26440 (JFX80_26455) | 18934..19203 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| JFX80_RS26445 (JFX80_26460) | 19205..20221 | - | 1017 | WP_000583427.1 | Gfo/Idh/MocA family oxidoreductase | - |
| JFX80_RS26450 (JFX80_26465) | 20221..21051 | - | 831 | WP_016230897.1 | HAD-IIB family hydrolase | - |
| JFX80_RS26455 (JFX80_26470) | 21035..22261 | - | 1227 | WP_000655924.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| JFX80_RS26460 (JFX80_26475) | 23120..23338 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JFX80_RS26465 (JFX80_26480) | 23340..23645 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JFX80_RS26470 (JFX80_26485) | 23646..24452 | + | 807 | WP_033806549.1 | site-specific integrase | - |
| JFX80_RS26475 (JFX80_26490) | 24631..25275 | + | 645 | WP_001144036.1 | ParA family protein | - |
| JFX80_RS26480 (JFX80_26495) | 25362..25670 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| JFX80_RS26485 (JFX80_26500) | 26081..27061 | + | 981 | WP_000688509.1 | plasmid segregation protein ParM | - |
| JFX80_RS26490 (JFX80_26505) | 27054..27470 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JFX80_RS26495 (JFX80_26510) | 27472..28746 | - | 1275 | WP_106904608.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JFX80_RS26500 (JFX80_26515) | 28746..29183 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JFX80_RS26505 (JFX80_26520) | 29180..29428 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JFX80_RS27490 | 29712..30023 | + | 312 | WP_032320643.1 | hypothetical protein | - |
| JFX80_RS26510 (JFX80_26525) | 30133..31035 | + | 903 | WP_077775375.1 | DUF1281 domain-containing protein | - |
| JFX80_RS26515 (JFX80_26530) | 31039..31344 | + | 306 | WP_032236829.1 | hypothetical protein | - |
| JFX80_RS26520 (JFX80_26535) | 31421..32104 | + | 684 | WP_000086113.1 | DNA methylase | - |
| JFX80_RS26525 (JFX80_26540) | 32105..32326 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| JFX80_RS26530 (JFX80_26545) | 32307..32774 | + | 468 | WP_225394947.1 | DUF1380 family protein | - |
| JFX80_RS26535 (JFX80_26550) | 32819..33172 | + | 354 | Protein_44 | hypothetical protein | - |
| JFX80_RS26540 (JFX80_26555) | 33361..34548 | - | 1188 | WP_000937604.1 | IS91 family transposase ISEc37 | Transposase |
| JFX80_RS26545 (JFX80_26560) | 34548..34913 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JFX80_RS26550 (JFX80_26565) | 35089..36039 | + | 951 | WP_000038327.1 | Recombination-promoting nuclease RpnA | VF |
| JFX80_RS26555 (JFX80_26570) | 36341..37528 | - | 1188 | WP_000937604.1 | IS91 family transposase ISEc37 | Transposase |
| JFX80_RS26560 (JFX80_26575) | 37528..37893 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JFX80_RS26565 (JFX80_26580) | 37984..38517 | + | 534 | Protein_50 | IS3 family transposase ISLad1 | Transposase |
| JFX80_RS26570 (JFX80_26585) | 38930..40432 | + | 1503 | WP_000715083.1 | hypothetical protein | - |
| JFX80_RS27670 | 41218..41313 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| JFX80_RS26575 (JFX80_26590) | 41705..42007 | + | 303 | WP_000386902.1 | hypothetical protein | - |
| JFX80_RS27495 | 42007..42075 | - | 69 | Protein_54 | pilus protein | - |
| JFX80_RS26580 (JFX80_26595) | 42427..42861 | + | 435 | WP_000218857.1 | hypothetical protein | - |
| JFX80_RS26585 (JFX80_26600) | 42954..43220 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| JFX80_RS26590 (JFX80_26605) | 43285..44163 | + | 879 | WP_032211189.1 | Recombination-promoting nuclease RpnA | VF |
| JFX80_RS26595 (JFX80_26610) | 44225..44431 | + | 207 | WP_001532090.1 | hypothetical protein | VF |
| JFX80_RS26600 (JFX80_26615) | 44462..44713 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| JFX80_RS26605 (JFX80_26620) | 45291..46139 | + | 849 | WP_136769813.1 | DUF4942 domain-containing protein | - |
| JFX80_RS26610 (JFX80_26625) | 46223..46558 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| JFX80_RS26615 (JFX80_26630) | 46791..47123 | + | 333 | WP_001291056.1 | plasmid mobilization protein MobA | - |
| JFX80_RS26620 (JFX80_26635) | 47135..49846 | + | 2712 | WP_198774784.1 | Protein TraI | Relaxase |
| JFX80_RS26625 (JFX80_26640) | 49914..50345 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| JFX80_RS26630 (JFX80_26645) | 50591..52639 | - | 2049 | WP_198774785.1 | TonB-dependent siderophore receptor IreA | - |
| JFX80_RS26635 (JFX80_26650) | 53352..53525 | - | 174 | WP_000351067.1 | hypothetical protein | - |
| JFX80_RS26640 (JFX80_26655) | 53629..55164 | - | 1536 | Protein_67 | IS66-like element ISEc8 family transposase | - |
| JFX80_RS26645 (JFX80_26660) | 55245..55562 | - | 318 | WP_000612586.1 | IS66 family transposase ISEc8 | Transposase |
| JFX80_RS26650 (JFX80_26665) | 55715..55936 | - | 222 | WP_001477293.1 | IS66 family transposase ISEc8 | Transposase |
| JFX80_RS26655 (JFX80_26670) | 56506..58809 | - | 2304 | WP_198774786.1 | F-type conjugative transfer protein TrbC | - |
| JFX80_RS26660 (JFX80_26675) | 58790..59908 | - | 1119 | WP_000155610.1 | DsbC family protein | - |
| JFX80_RS26665 (JFX80_26680) | 59905..61194 | - | 1290 | WP_000121923.1 | IncI1-type conjugal transfer protein TrbA | - |
| JFX80_RS27675 | 61739..61834 | + | 96 | WP_001443691.1 | DinQ-like type I toxin DqlB | - |
| JFX80_RS27680 | 62485..62580 | + | 96 | WP_000609151.1 | DinQ-like type I toxin DqlB | - |
| JFX80_RS26675 (JFX80_26695) | 62726..62998 | - | 273 | WP_215259017.1 | flagellar biosynthesis protein FlgM | - |
| JFX80_RS26680 (JFX80_26700) | 63083..63274 | - | 192 | WP_024219659.1 | hypothetical protein | - |
| JFX80_RS26685 (JFX80_26705) | 63284..63649 | - | 366 | WP_001379349.1 | hypothetical protein | - |
| JFX80_RS26690 (JFX80_26710) | 63659..63850 | - | 192 | WP_000789658.1 | hypothetical protein | - |
| JFX80_RS26695 (JFX80_26715) | 64292..64777 | - | 486 | WP_136763787.1 | thermonuclease family protein | - |
| JFX80_RS26700 (JFX80_26720) | 64927..65550 | + | 624 | WP_136763788.1 | DNA-binding protein | - |
| JFX80_RS26705 (JFX80_26725) | 65638..66093 | + | 456 | WP_198774806.1 | DUF2569 family protein | - |
| JFX80_RS26710 (JFX80_26730) | 66293..67828 | + | 1536 | WP_198774805.1 | phosphoethanolamine transferase | - |
| JFX80_RS26715 (JFX80_26735) | 67921..68163 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| JFX80_RS26720 (JFX80_26740) | 68594..69643 | + | 1050 | Protein_84 | ISNCY family transposase ISCARN112 | Transposase |
| JFX80_RS27500 | 69764..69913 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| JFX80_RS26725 (JFX80_26745) | 70357..70686 | - | 330 | Protein_86 | FlxA-like family protein | - |
| JFX80_RS26730 (JFX80_26750) | 70889..71194 | - | 306 | WP_001326990.1 | protein YdfV | - |
| JFX80_RS26735 (JFX80_26755) | 71219..71458 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JFX80_RS26740 (JFX80_26760) | 71458..71745 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JFX80_RS26745 (JFX80_26765) | 71817..71969 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| JFX80_RS26750 (JFX80_26770) | 72022..72204 | - | 183 | WP_021580031.1 | hypothetical protein | - |
| JFX80_RS26755 (JFX80_26775) | 72538..72690 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| JFX80_RS26765 (JFX80_26785) | 73005..73136 | - | 132 | Protein_93 | ethanolamine utilization protein EutE | - |
| JFX80_RS26770 (JFX80_26790) | 73231..73440 | + | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| JFX80_RS26775 (JFX80_26795) | 73505..74155 | - | 651 | WP_001044248.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JFX80_RS26780 (JFX80_26800) | 74226..76391 | - | 2166 | WP_000691806.1 | DotA/TraY family protein | - |
| JFX80_RS26785 (JFX80_26805) | 76464..77033 | - | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| JFX80_RS26790 (JFX80_26810) | 77030..78235 | - | 1206 | WP_001189543.1 | conjugal transfer protein TraW | - |
| JFX80_RS26795 (JFX80_26815) | 78193..78813 | - | 621 | WP_000286858.1 | hypothetical protein | - |
| JFX80_RS26800 (JFX80_26820) | 78813..81857 | - | 3045 | WP_001024756.1 | conjugal transfer protein | - |
| JFX80_RS26805 (JFX80_26825) | 82082..82627 | + | 546 | WP_001368500.1 | hypothetical protein | - |
| JFX80_RS26810 (JFX80_26830) | 82600..82983 | - | 384 | WP_231202791.1 | hypothetical protein | - |
| JFX80_RS26815 (JFX80_26835) | 82980..83339 | - | 360 | WP_073614109.1 | hypothetical protein | - |
| JFX80_RS26820 (JFX80_26840) | 83394..84212 | - | 819 | WP_072121450.1 | conjugal transfer protein TraT | - |
| JFX80_RS27685 (JFX80_26845) | 84127..84411 | - | 285 | WP_001373102.1 | hypothetical protein | - |
| JFX80_RS26830 (JFX80_26850) | 84435..84833 | - | 399 | WP_000086069.1 | hypothetical protein | - |
| JFX80_RS26835 (JFX80_26855) | 84882..85412 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| JFX80_RS26840 (JFX80_26860) | 85409..86122 | - | 714 | WP_032211045.1 | conjugal transfer protein TraP | - |
| JFX80_RS26845 (JFX80_26865) | 86119..87450 | - | 1332 | WP_001272012.1 | conjugal transfer protein TraO | - |
| JFX80_RS26850 (JFX80_26870) | 87454..88428 | - | 975 | WP_001165561.1 | hypothetical protein | VF |
| JFX80_RS26855 (JFX80_26875) | 88439..89134 | - | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| JFX80_RS26860 (JFX80_26880) | 89146..89496 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| JFX80_RS26865 (JFX80_26885) | 89513..93556 | - | 4044 | WP_198788072.1 | DUF5710 domain-containing protein | - |
| JFX80_RS26870 (JFX80_26890) | 93621..93911 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| JFX80_RS26875 (JFX80_26895) | 93908..95056 | - | 1149 | WP_000625249.1 | putative protein YggR | VF |
| JFX80_RS26880 (JFX80_26900) | 95040..95876 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| JFX80_RS26885 (JFX80_26905) | 95873..96325 | - | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| JFX80_RS26890 (JFX80_26910) | 96374..96544 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| JFX80_RS26895 (JFX80_26915) | 96684..97886 | - | 1203 | WP_062892305.1 | conjugal transfer protein TraF | - |
| JFX80_RS26900 (JFX80_26920) | 97990..98811 | - | 822 | WP_032211042.1 | hypothetical protein | - |
| JFX80_RS26905 (JFX80_26925) | 99073..99408 | + | 336 | WP_001368489.1 | hypothetical protein | - |
| JFX80_RS26910 (JFX80_26930) | 99838..100128 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| JFX80_RS26915 (JFX80_26935) | 100170..101336 | - | 1167 | WP_062863568.1 | site-specific integrase | - |
| JFX80_RS26920 (JFX80_26940) | 101388..101789 | + | 402 | Protein_124 | phage tail protein | - |
| JFX80_RS26925 (JFX80_26945) | 101795..103027 | - | 1233 | WP_062875150.1 | hypothetical protein | VF |
| JFX80_RS26930 (JFX80_26950) | 103032..103667 | - | 636 | WP_021580044.1 | prepilin peptidase | - |
| JFX80_RS26935 (JFX80_26955) | 103686..104159 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| JFX80_RS26940 (JFX80_26960) | 104213..104749 | - | 537 | WP_001011156.1 | type 4 pilus major pilin | - |
| JFX80_RS26945 (JFX80_26965) | 104823..105923 | - | 1101 | WP_000670136.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JFX80_RS26950 (JFX80_26970) | 105925..107433 | - | 1509 | WP_062863527.1 | Type II secretion system protein E | VF |
| JFX80_RS26955 (JFX80_26975) | 107518..107970 | - | 453 | WP_044783584.1 | type IV pilus biogenesis protein PilP | - |
| JFX80_RS26960 (JFX80_26980) | 107960..109255 | - | 1296 | WP_033806466.1 | type 4b pilus protein PilO2 | - |
| JFX80_RS26965 (JFX80_26985) | 109276..110895 | - | 1620 | WP_001034996.1 | Outer membrane lipoprotein BfpB | VF |
| JFX80_RS26970 (JFX80_26990) | 110926..111363 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| JFX80_RS26975 (JFX80_26995) | 111368..112435 | - | 1068 | WP_062863528.1 | hypothetical protein | VF |
| JFX80_RS26980 (JFX80_27000) | 112651..112977 | + | 327 | WP_000132352.1 | hypothetical protein | - |
| JFX80_RS26985 (JFX80_27005) | 112970..113857 | - | 888 | WP_198788074.1 | hypothetical protein | - |
| JFX80_RS26990 (JFX80_27010) | 114051..114293 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| JFX80_RS26995 (JFX80_27015) | 114374..116068 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| JFX80_RS27000 (JFX80_27020) | 116095..116715 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| JFX80_RS27005 (JFX80_27025) | 116982..117647 | - | 666 | WP_000154145.1 | hypothetical protein | - |
| JFX80_RS27010 (JFX80_27030) | 117788..118294 | - | 507 | WP_062863531.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|