MGE detailed information
MGE type: Genomic_island MGE length: 11326 bp
Accession: NZ_CP075141 Location: 841426..852751 Organism: Salmonella enterica strain CFSAN033950 Replicon: chromosome
Accession: NZ_CP075141 Location: 841426..852751 Organism: Salmonella enterica strain CFSAN033950 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACV97_RS04045 (836872) | 836872..837970 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| ACV97_RS04050 (837980) | 837980..839497 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| ACV97_RS04055 (839573) | 839573..840118 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| ACV97_RS04060 (840383) | 840383..841141 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| ACV97_RS04070 (841426) | 841426..842232 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| ACV97_RS04075 (842507) | 842507..842758 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| ACV97_RS04080 (842935) | 842935..843162 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| ACV97_RS04085 (843162) | 843162..843560 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| ACV97_RS04090 (844366) | 844366..844902 | + | 537 | WP_001038506.1 | hypothetical protein | VF |
| ACV97_RS04095 (844949) | 844949..845581 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| ACV97_RS04100 (846300) | 846300..846884 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| ACV97_RS04105 (847004) | 847004..849493 | + | 2490 | WP_000705483.1 | hypothetical protein | VF |
| ACV97_RS04110 (849534) | 849534..850277 | + | 744 | WP_000798504.1 | hypothetical protein | VF |
| ACV97_RS04115 (850274) | 850274..851350 | + | 1077 | WP_000141329.1 | outer membrane protein | - |
| ACV97_RS04120 (851494) | 851494..852006 | + | 513 | WP_000336259.1 | CaiF/GrlA family transcriptional regulator | - |
| ACV97_RS04125 (851993) | 851993..852751 | + | 759 | WP_000134791.1 | transcriptional regulator | - |
| ACV97_RS04130 (852961) | 852961..853833 | - | 873 | WP_021294214.1 | nickel/cobalt efflux protein RcnA | - |
| ACV97_RS04135 (853956) | 853956..854228 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| ACV97_RS04140 (854259) | 854259..855488 | - | 1230 | WP_000036837.1 | amino acid permease | - |
| ACV97_RS04145 (855630) | 855630..856085 | - | 456 | WP_017465480.1 | multidrug/biocide efflux PACE transporter | - |
| ACV97_RS04150 (856189) | 856189..857052 | + | 864 | WP_001270777.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Genomic island | TA439 | NC_003197 | 3186004..3197296 | 0.004 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.001 |