MGE detailed information
MGE type: Prophage MGE length: 54518 bp
Accession: NZ_CP075141 Location: 1962917..2017434 Organism: Salmonella enterica strain CFSAN033950 Replicon: chromosome
Accession: NZ_CP075141 Location: 1962917..2017434 Organism: Salmonella enterica strain CFSAN033950 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACV97_RS09310 () | 1957973..1958425 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| ACV97_RS09315 () | 1958455..1959195 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| ACV97_RS09320 () | 1959232..1959753 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| ACV97_RS09325 () | 1959755..1960354 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| ACV97_RS09330 () | 1960981..1961877 | - | 897 | WP_010989032.1 | DUF4034 domain-containing protein | - |
| ACV97_RS09335 () | 1962297..1962908 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| ACV97_RS09340 () | 1962917..1963927 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| ACV97_RS09345 () | 1964006..1964791 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| ACV97_RS09350 () | 1964788..1965543 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| ACV97_RS09355 () | 1965622..1966566 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| ACV97_RS09360 () | 1966582..1967901 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| ACV97_RS09365 () | 1968018..1968989 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| ACV97_RS09370 () | 1969062..1970504 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| ACV97_RS09375 () | 1970628..1971497 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| ACV97_RS09380 () | 1971839..1973314 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| ACV97_RS09385 () | 1973549..1975360 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| ACV97_RS09390 () | 1975398..1976039 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| ACV97_RS09395 () | 1976139..1977317 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| ACV97_RS09400 () | 1977448..1977738 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| ACV97_RS09405 () | 1977806..1978159 | + | 354 | WP_001042119.1 | protein YebF | - |
| ACV97_RS09410 () | 1978253..1978912 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| ACV97_RS09415 () | 1979125..1981176 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| ACV97_RS09420 () | 1981211..1981909 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| ACV97_RS09425 () | 1981933..1982589 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| ACV97_RS09430 () | 1982697..1982927 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| ACV97_RS09435 () | 1983065..1983439 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| ACV97_RS09440 () | 1983440..1984315 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| ACV97_RS09445 () | 1984332..1984685 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1984785..1984930 | - | 146 | - | - | Antitoxin Detail |
| - | 1984825..1984928 | + | 104 | - | - | Toxin Detail |
| ACV97_RS09450 () | 1985059..1985982 | - | 924 | Protein_1849 | hypothetical protein ; Integrase | Integrase |
| ACV97_RS24120 () | 1986246..1986707 | - | 462 | Protein_1850 | DNA breaking-rejoining protein | - |
| ACV97_RS09460 () | 1986696..1986887 | + | 192 | Protein_1851 | glycoside hydrolase family 19 protein | - |
| ACV97_RS09465 () | 1986941..1987474 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| ACV97_RS09470 () | 1987731..1987898 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| ACV97_RS09475 () | 1987963..1988151 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| ACV97_RS09480 () | 1988206..1988466 | + | 261 | Protein_1855 | DUF1441 family protein | - |
| ACV97_RS24125 () | 1988468..1988683 | + | 216 | Protein_1856 | shikimate transporter | - |
| ACV97_RS09485 () | 1988681..1989025 | + | 345 | Protein_1857 | macro domain-containing protein | - |
| ACV97_RS09490 () | 1989035..1989505 | + | 471 | Protein_1858 | tail fiber assembly protein | - |
| ACV97_RS09495 () | 1989602..1989802 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| ACV97_RS24130 () | 1990192..1990372 | - | 181 | Protein_1860 | IS3 family transposase | - |
| ACV97_RS09500 () | 1990363..1990464 | + | 102 | Protein_1861 | arsenic transporter | - |
| ACV97_RS24135 () | 1991086..1991318 | + | 233 | Protein_1862 | helix-turn-helix domain-containing protein | - |
| ACV97_RS09515 () | 1991645..1992259 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| ACV97_RS09520 () | 1992269..1992427 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| ACV97_RS09525 () | 1992560..1993474 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| ACV97_RS09530 () | 1994778..1995200 | - | 423 | Protein_1866 | hypothetical protein ; Integrase | Integrase |
| ACV97_RS09535 () | 1995270..1996464 | + | 1195 | Protein_1867 | IS256 family transposase IS285 | Transposase |
| ACV97_RS09540 () | 1996610..1996750 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| ACV97_RS09545 () | 1996916..1997185 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| ACV97_RS09550 () | 1997555..1997974 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| ACV97_RS09555 () | 1998362..1998838 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| ACV97_RS09560 () | 1999168..1999563 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| ACV97_RS09565 () | 2000247..2000969 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| ACV97_RS09570 () | 2001254..2001418 | + | 165 | WP_001134856.1 | membrane protein | - |
| ACV97_RS09575 () | 2001642..2002292 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| ACV97_RS09580 () | 2002311..2002502 | - | 192 | WP_000457836.1 | YebW family protein | - |
| ACV97_RS09585 () | 2002613..2002849 | - | 237 | WP_024131108.1 | YebV family protein | - |
| ACV97_RS09590 () | 2002967..2004406 | - | 1440 | WP_064239785.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| ACV97_RS09595 () | 2004484..2007117 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| ACV97_RS09600 () | 2007086..2008369 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| ACV97_RS09605 () | 2008498..2008995 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| ACV97_RS09610 () | 2009093..2009779 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| ACV97_RS09615 () | 2009799..2011847 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| ACV97_RS09620 () | 2012041..2012922 | + | 882 | WP_000984498.1 | protease HtpX | - |
| ACV97_RS09625 () | 2012970..2014343 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| ACV97_RS09630 () | 2014519..2015310 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| ACV97_RS09635 () | 2015522..2015761 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| ACV97_RS09640 () | 2015919..2016062 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| ACV97_RS09645 () | 2016133..2016420 | + | 288 | WP_001000660.1 | YebO family protein | - |
| ACV97_RS09650 () | 2017069..2017212 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| ACV97_RS09655 () | 2017225..2017434 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| ACV97_RS09660 () | 2017654..2019399 | + | 1746 | WP_064239775.1 | peptidoglycan glycosyltransferase FtsI | - |
| ACV97_RS09665 () | 2019465..2020274 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| ACV97_RS09670 () | 2020271..2020837 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| ACV97_RS09675 () | 2021247..2021705 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.009 |