MGE detailed information
MGE type: Conjugative plasmid MGE length: 140375 bp
Accession: NZ_CP075063 Location: 1..140375 Organism: Escherichia coli strain EC_J_9 Replicon: plasmid pOQX_J9_2
Accession: NZ_CP075063 Location: 1..140375 Organism: Escherichia coli strain EC_J_9 Replicon: plasmid pOQX_J9_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4F96_RS23815 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| H4F96_RS23820 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| H4F96_RS23825 (2124) | 2124..2312 | - | 189 | WP_001324033.1 | hypothetical protein | - |
| H4F96_RS23830 (2686) | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| H4F96_RS23835 (3657) | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| H4F96_RS23840 (5199) | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| H4F96_RS23845 (7449) | 7449..7628 | - | 180 | Protein_6 | integrase core domain-containing protein | - |
| H4F96_RS23850 (7767) | 7767..8966 | + | 1200 | Protein_7 | IS3 family transposase IS629 | Transposase |
| H4F96_RS23855 (9114) | 9114..9439 | - | 326 | Protein_8 | IS3 family transposase ISLad1 | Transposase |
| H4F96_RS25835 (9485) | 9485..9825 | + | 341 | Protein_9 | IS3 family transposase | - |
| H4F96_RS23860 (10420) | 10420..11607 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| H4F96_RS23865 (11604) | 11604..13544 | + | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| H4F96_RS23870 (13548) | 13548..14918 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| H4F96_RS23875 (15392) | 15392..15586 | + | 195 | Protein_13 | IS200-IS605 family transposase IS200C | Transposase |
| H4F96_RS23880 (15715) | 15715..16656 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| H4F96_RS23885 (16891) | 16891..18280 | - | 1390 | Protein_15 | ISNCY family transposase ISKpn21 | Transposase |
| H4F96_RS23890 (18590) | 18590..18739 | - | 150 | Protein_16 | IS3 family transposase IS2 | Transposase |
| H4F96_RS23895 (18917) | 18917..20110 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| H4F96_RS23900 (21352) | 21352..22089 | - | 738 | Protein_18 | IS3 family transposase IS2 | Transposase |
| H4F96_RS23905 (22142) | 22142..23304 | + | 1163 | WP_088846059.1 | IS3 family transposase ISEc17 | Transposase |
| H4F96_RS23910 (23321) | 23321..23841 | - | 521 | Protein_20 | IS3 family transposase IS2 | Transposase |
| H4F96_RS23915 (24466) | 24466..24759 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| H4F96_RS23920 (24817) | 24817..25016 | - | 200 | Protein_22 | lysis protein | - |
| H4F96_RS23925 (25570) | 25570..26594 | + | 1025 | Protein_23 | integrase core domain-containing protein | - |
| H4F96_RS23930 (27905) | 27905..29020 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| H4F96_RS23935 (29160) | 29160..32819 | + | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| H4F96_RS23940 (32923) | 32923..34152 | + | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| H4F96_RS23945 (34237) | 34237..35193 | + | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
| H4F96_RS23950 (35238) | 35238..37415 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| H4F96_RS23955 (38281) | 38281..39315 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| H4F96_RS25840 (39496) | 39496..39797 | + | 302 | Protein_30 | hypothetical protein | - |
| H4F96_RS23960 (39875) | 39875..40183 | - | 309 | WP_000377483.1 | DUF6404 family protein | - |
| H4F96_RS23965 (40336) | 40336..40461 | - | 126 | Protein_32 | type II toxin-antitoxin system toxin YacB | - |
| H4F96_RS23970 (40461) | 40461..40729 | - | 269 | Protein_33 | type II toxin-antitoxin system antitoxin YacA | - |
| H4F96_RS23975 (41340) | 41340..42614 | + | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| H4F96_RS23980 (42607) | 42607..44703 | + | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| H4F96_RS23985 (44873) | 44873..45184 | - | 312 | WP_001259758.1 | colicin V | - |
| H4F96_RS23990 (45162) | 45162..45398 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| H4F96_RS25845 (45517) | 45517..45960 | + | 444 | WP_001323891.1 | dehydrogenase | - |
| H4F96_RS25850 (45932) | 45932..46336 | + | 405 | WP_001389361.1 | hypothetical protein | - |
| H4F96_RS24000 (46338) | 46338..46607 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| H4F96_RS24005 (46604) | 46604..47584 | + | 981 | WP_063099985.1 | NAD(P)-binding domain-containing protein | - |
| H4F96_RS24010 (47660) | 47660..48040 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| H4F96_RS24015 (48037) | 48037..48384 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| H4F96_RS24020 (48434) | 48434..49294 | + | 861 | Protein_44 | IS66 family transposase ISEc8 | Transposase |
| H4F96_RS24025 (49330) | 49330..50628 | - | 1299 | Protein_45 | Tn3 family transposase TnpA_Tn3 | Transposase |
| H4F96_RS24030 (50696) | 50696..51400 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H4F96_RS24035 (51735) | 51735..52127 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| H4F96_RS24040 (52447) | 52447..52833 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| H4F96_RS24045 (53027) | 53027..53731 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H4F96_RS24050 (54051) | 54051..55226 | + | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| H4F96_RS24055 (55250) | 55250..58402 | + | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| H4F96_RS24060 (58472) | 58472..58951 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| H4F96_RS24065 (59053) | 59053..59757 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H4F96_RS24070 (59831) | 59831..60304 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| H4F96_RS24075 (60462) | 60462..61475 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| H4F96_RS24080 (61678) | 61678..62028 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| H4F96_RS24085 (62154) | 62154..62483 | + | 330 | Protein_57 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| H4F96_RS24090 (62537) | 62537..63241 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H4F96_RS24095 (63392) | 63392..64207 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| H4F96_RS24100 (64397) | 64397..65101 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H4F96_RS24105 (65166) | 65166..66416 | - | 1251 | Protein_61 | transposase | - |
| H4F96_RS24110 (66491) | 66491..67159 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| H4F96_RS24115 (67195) | 67195..67431 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| H4F96_RS24120 (67428) | 67428..67790 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| H4F96_RS24125 (67808) | 67808..69502 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| H4F96_RS24130 (69554) | 69554..69976 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| H4F96_RS24135 (70012) | 70012..70287 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| H4F96_RS24140 (70301) | 70301..70651 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| H4F96_RS24145 (70723) | 70723..71157 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| H4F96_RS24155 (72210) | 72210..72611 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| H4F96_RS24160 (72544) | 72544..72801 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| H4F96_RS24165 (72894) | 72894..73547 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| H4F96_RS24170 (73645) | 73645..73785 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| H4F96_RS24175 (74486) | 74486..75343 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| H4F96_RS24180 (75336) | 75336..75818 | - | 483 | WP_181726436.1 | hypothetical protein | - |
| H4F96_RS25855 (75811) | 75811..75858 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| H4F96_RS25860 (75849) | 75849..76100 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| H4F96_RS24190 (76117) | 76117..76374 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| H4F96_RS24195 (76658) | 76658..76807 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (76851) | 76851..76912 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (76851) | 76851..76912 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (76851) | 76851..76912 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (76851) | 76851..76912 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| H4F96_RS24200 (77168) | 77168..77242 | - | 75 | Protein_81 | endonuclease | - |
| H4F96_RS24205 (77488) | 77488..77700 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| H4F96_RS24210 (77836) | 77836..78396 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| H4F96_RS24215 (78499) | 78499..79359 | - | 861 | WP_000704514.1 | putative protein YcjY | VF |
| H4F96_RS24220 (79418) | 79418..80164 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| H4F96_RS24225 (80184) | 80184..85454 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| H4F96_RS24230 (85536) | 85536..85763 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| H4F96_RS24235 (85763) | 85763..86161 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H4F96_RS24240 (86170) | 86170..88323 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| H4F96_RS24245 (88576) | 88576..89307 | - | 732 | WP_021499552.1 | conjugal transfer complement resistance protein TraT | - |
| H4F96_RS24250 (89339) | 89339..89836 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| H4F96_RS24255 (89852) | 89852..92674 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| H4F96_RS24260 (92671) | 92671..94044 | - | 1374 | WP_021536211.1 | conjugal transfer pilus assembly protein TraH | - |
| H4F96_RS24265 (94044) | 94044..94424 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| H4F96_RS24270 (94411) | 94411..94752 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| H4F96_RS24275 (94682) | 94682..95227 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H4F96_RS24280 (95214) | 95214..95498 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H4F96_RS24285 (95579) | 95579..95893 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| H4F96_RS24290 (95895) | 95895..96242 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| H4F96_RS24295 (96258) | 96258..97001 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H4F96_RS24300 (96994) | 96994..97251 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| H4F96_RS24305 (97278) | 97278..99086 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H4F96_RS24310 (99083) | 99083..99721 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H4F96_RS24315 (99730) | 99730..100722 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| H4F96_RS24320 (100719) | 100719..101351 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| H4F96_RS24325 (101348) | 101348..101734 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| H4F96_RS24330 (101731) | 101731..104358 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| H4F96_RS24335 (104518) | 104518..104739 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| H4F96_RS24340 (104874) | 104874..105389 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H4F96_RS24345 (105386) | 105386..105637 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| H4F96_RS24350 (105649) | 105649..105846 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| H4F96_RS24355 (105833) | 105833..106423 | - | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| H4F96_RS24360 (106413) | 106413..107840 | - | 1428 | WP_167731963.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| H4F96_RS24365 (107840) | 107840..108568 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| H4F96_RS24370 (108555) | 108555..109121 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| H4F96_RS24375 (109143) | 109143..109454 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| H4F96_RS24380 (109469) | 109469..109834 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| H4F96_RS24385 (109867) | 109867..110268 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| H4F96_RS24390 (110361) | 110361..111050 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| H4F96_RS24395 (111237) | 111237..111620 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| H4F96_RS24400 (111941) | 111941..112543 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| H4F96_RS24405 (112840) | 112840..113661 | - | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| H4F96_RS24410 (113779) | 113779..114066 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| H4F96_RS25865 (114091) | 114091..114297 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| H4F96_RS25870 (114367) | 114367..114539 | + | 173 | Protein_125 | hypothetical protein | - |
| H4F96_RS24415 (114537) | 114537..114767 | - | 231 | WP_071586998.1 | hypothetical protein | - |
| H4F96_RS24420 (114987) | 114987..115112 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H4F96_RS25875 (115054) | 115054..115203 | - | 150 | Protein_128 | plasmid maintenance protein Mok | - |
| - (115189) | 115189..115413 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (115189) | 115189..115413 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (115189) | 115189..115413 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (115189) | 115189..115413 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| H4F96_RS24425 (115225) | 115225..115413 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| H4F96_RS24430 (115382) | 115382..116144 | - | 763 | Protein_130 | plasmid SOS inhibition protein A | - |
| H4F96_RS24435 (116141) | 116141..116575 | - | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| H4F96_RS24440 (116630) | 116630..116827 | - | 198 | Protein_132 | hypothetical protein | - |
| H4F96_RS24445 (116855) | 116855..117088 | - | 234 | WP_000005987.1 | DUF905 family protein | - |
| H4F96_RS24450 (117156) | 117156..117695 | - | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| H4F96_RS24455 (117721) | 117721..117927 | - | 207 | WP_000275856.1 | hypothetical protein | - |
| H4F96_RS25880 (117997) | 117997..118077 | + | 81 | Protein_136 | hypothetical protein | - |
| H4F96_RS25885 (118260) | 118260..118429 | - | 170 | Protein_137 | hypothetical protein | - |
| H4F96_RS24460 (119023) | 119023..119994 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| H4F96_RS24465 (119994) | 119994..121160 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| H4F96_RS24475 (122642) | 122642..124843 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| H4F96_RS24480 (124869) | 124869..126202 | - | 1334 | Protein_142 | L-lysine N6-monooxygenase | VF |
| H4F96_RS24485 (126199) | 126199..127941 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| H4F96_RS24490 (127941) | 127941..128888 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| H4F96_RS24495 (128889) | 128889..130613 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| H4F96_RS24500 (130749) | 130749..131942 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| H4F96_RS24505 (132322) | 132322..132702 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| H4F96_RS24510 (133043) | 133043..133456 | - | 414 | Protein_148 | phosphopyruvate hydratase | - |
| H4F96_RS24515 (133454) | 133454..133711 | + | 258 | Protein_149 | Tn3 family transposase | - |
| H4F96_RS24520 (133945) | 133945..134802 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| H4F96_RS24525 (134799) | 134799..135656 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| H4F96_RS24530 (135653) | 135653..136480 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| H4F96_RS24535 (136480) | 136480..137394 | - | 915 | WP_213190805.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| H4F96_RS24540 (137750) | 137750..138447 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| H4F96_RS24545 (138627) | 138627..139140 | - | 514 | Protein_155 | DUF4113 domain-containing protein | - |
| H4F96_RS24550 (139201) | 139201..139305 | - | 105 | Protein_156 | AAA family ATPase | - |
| H4F96_RS24555 (139307) | 139307..139630 | - | 324 | Protein_157 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|