MGE detailed information
MGE type: Prophage MGE length: 54511 bp
Accession: NZ_CP074663 Location: 2095146..2149656 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: chromosome
Accession: NZ_CP074663 Location: 2095146..2149656 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN008081 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG493_RS10150 () | 2090203..2090655 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| BG493_RS10155 () | 2090685..2091425 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| BG493_RS10160 () | 2091462..2091983 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| BG493_RS10165 () | 2091985..2092584 | - | 600 | WP_000716748.1 | YebB family permuted papain-like enzyme | - |
| BG493_RS10170 () | 2093211..2094106 | - | 896 | Protein_1998 | DUF4034 domain-containing protein | - |
| BG493_RS10175 () | 2094526..2095137 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| BG493_RS10180 () | 2095146..2096156 | + | 1011 | WP_000568508.1 | hypothetical protein | VF |
| BG493_RS10185 () | 2096235..2097020 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| BG493_RS10190 () | 2097017..2097772 | - | 756 | WP_000203014.1 | hypothetical protein | VF |
| BG493_RS10195 () | 2097851..2098795 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| BG493_RS10200 () | 2098811..2100130 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| BG493_RS10205 () | 2100247..2101218 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| BG493_RS10210 () | 2101291..2102733 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| BG493_RS10215 () | 2102857..2103726 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| BG493_RS10220 () | 2104068..2105543 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| BG493_RS10225 () | 2105778..2107589 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| BG493_RS10230 () | 2107627..2108268 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| BG493_RS10235 () | 2108368..2109546 | - | 1179 | WP_070130137.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| BG493_RS10240 () | 2109677..2109967 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| BG493_RS10245 () | 2110035..2110388 | + | 354 | WP_001042119.1 | protein YebF | - |
| BG493_RS10250 () | 2110482..2111141 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| BG493_RS10255 () | 2111354..2113405 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| BG493_RS10260 () | 2113440..2114138 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| BG493_RS10265 () | 2114162..2114818 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| BG493_RS10270 () | 2114926..2115156 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| BG493_RS10275 () | 2115294..2115668 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| BG493_RS10280 () | 2115669..2116544 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| BG493_RS10285 () | 2116561..2116914 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2117014..2117159 | - | 146 | - | - | Antitoxin Detail |
| - | 2117054..2117157 | + | 104 | - | - | Toxin Detail |
| BG493_RS10290 () | 2117288..2118211 | - | 924 | Protein_2022 | hypothetical protein ; Integrase | Integrase |
| BG493_RS24205 () | 2118475..2118936 | - | 462 | Protein_2023 | DNA breaking-rejoining protein | - |
| BG493_RS10300 () | 2118925..2119116 | + | 192 | Protein_2024 | glycoside hydrolase family 19 protein | - |
| BG493_RS10305 () | 2119170..2119703 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| BG493_RS10310 () | 2119960..2120127 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| BG493_RS10315 () | 2120192..2120380 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| BG493_RS10320 () | 2120435..2120695 | + | 261 | Protein_2028 | DUF1441 family protein | - |
| BG493_RS10325 () | 2120910..2121254 | + | 345 | Protein_2029 | macro domain-containing protein | - |
| BG493_RS10330 () | 2121264..2121734 | + | 471 | Protein_2030 | tail fiber assembly protein | - |
| BG493_RS10335 () | 2121831..2122031 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| BG493_RS24210 () | 2122421..2122601 | - | 181 | Protein_2032 | IS3 family transposase | - |
| BG493_RS10340 () | 2122592..2122693 | + | 102 | Protein_2033 | arsenic transporter | - |
| BG493_RS24215 () | 2123315..2123547 | + | 233 | Protein_2034 | helix-turn-helix domain-containing protein | - |
| BG493_RS10355 () | 2123874..2124488 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| BG493_RS10360 () | 2124498..2124656 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| BG493_RS10365 () | 2124789..2125703 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| BG493_RS10370 () | 2127007..2127429 | - | 423 | Protein_2038 | hypothetical protein ; Integrase | Integrase |
| BG493_RS10375 () | 2127499..2128693 | + | 1195 | Protein_2039 | IS256 family transposase IS285 | Transposase |
| BG493_RS10380 () | 2128839..2128979 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| BG493_RS10385 () | 2129145..2129414 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| BG493_RS10390 () | 2129784..2130203 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| BG493_RS10395 () | 2130591..2131067 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| BG493_RS10400 () | 2131397..2131792 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| BG493_RS10405 () | 2132476..2133198 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| BG493_RS10410 () | 2133483..2133647 | + | 165 | WP_001134856.1 | membrane protein | - |
| BG493_RS10415 () | 2133871..2134521 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| BG493_RS10420 () | 2134540..2134731 | - | 192 | WP_000457836.1 | YebW family protein | - |
| BG493_RS10425 () | 2134842..2135078 | - | 237 | WP_024131108.1 | YebV family protein | - |
| BG493_RS10430 () | 2135196..2136635 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| BG493_RS10435 () | 2136713..2139346 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| BG493_RS10440 () | 2139315..2140598 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| BG493_RS10445 () | 2140727..2141224 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| BG493_RS10450 () | 2141322..2142001 | + | 680 | Protein_2054 | RNA chaperone ProQ | - |
| BG493_RS10455 () | 2142021..2144069 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| BG493_RS10460 () | 2144263..2145144 | + | 882 | WP_000984498.1 | protease HtpX | - |
| BG493_RS10465 () | 2145192..2146565 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| BG493_RS10470 () | 2146741..2147532 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| BG493_RS10475 () | 2147744..2147983 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| BG493_RS10480 () | 2148141..2148284 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| BG493_RS10485 () | 2148355..2148642 | + | 288 | WP_001000660.1 | YebO family protein | - |
| BG493_RS10490 () | 2149291..2149434 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| BG493_RS10495 () | 2149447..2149656 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| BG493_RS10500 () | 2149876..2151621 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| BG493_RS10505 () | 2151687..2152496 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| BG493_RS10510 () | 2152493..2153059 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| BG493_RS10515 () | 2153469..2153927 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.009 |