MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP073996 Location: 3392987..3402337 Organism: Escherichia coli strain PM7 Replicon: chromosome
Accession: NZ_CP073996 Location: 3392987..3402337 Organism: Escherichia coli strain PM7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU86_RS16395 (3389718) | 3389718..3390437 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| KFU86_RS16400 (3390434) | 3390434..3392065 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| KFU86_RS16405 (3392246) | 3392246..3392476 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| KFU86_RS16410 (3392488) | 3392488..3392760 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| KFU86_RS16415 (3392987) | 3392987..3393283 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| KFU86_RS16420 (3393311) | 3393311..3393484 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| KFU86_RS16425 (3393603) | 3393603..3395120 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| KFU86_RS16430 (3395357) | 3395357..3396814 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| KFU86_RS16435 (3396873) | 3396873..3399020 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| KFU86_RS16440 (3399100) | 3399100..3400434 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| KFU86_RS16445 (3400799) | 3400799..3402337 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| KFU86_RS16455 (3403136) | 3403136..3403711 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| KFU86_RS16460 (3403748) | 3403748..3405445 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| KFU86_RS16465 (3405421) | 3405421..3405759 | - | 339 | WP_000883407.1 | divalent cation tolerance protein CutA | - |
| KFU86_RS16470 (3405875) | 3405875..3407176 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |