MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94480 bp
Accession: NZ_CP073954 Location: 1..94480 Organism: Escherichia coli strain MB49 Replicon: plasmid pYLMB49a
Accession: NZ_CP073954 Location: 1..94480 Organism: Escherichia coli strain MB49 Replicon: plasmid pYLMB49a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU90_RS23155 (1) | 1..858 | + | 858 | WP_000130986.1 | incFII family plasmid replication initiator RepA | - |
| KFU90_RS23160 (1559) | 1559..1699 | + | 141 | WP_001629108.1 | hypothetical protein | - |
| KFU90_RS23165 (1791) | 1791..2675 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| KFU90_RS23170 (2671) | 2671..2840 | + | 170 | Protein_3 | resolvase | - |
| KFU90_RS23175 (3095) | 3095..3814 | + | 720 | Protein_4 | 3'-5' exonuclease | - |
| KFU90_RS23180 (3931) | 3931..4413 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| KFU90_RS23185 (4714) | 4714..5061 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| KFU90_RS23190 (5079) | 5079..5669 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| KFU90_RS23195 (5669) | 5669..5926 | - | 258 | WP_001542562.1 | hypothetical protein | - |
| KFU90_RS23200 (6255) | 6255..6707 | + | 453 | WP_000670960.1 | acyltransferase | - |
| KFU90_RS23205 (6739) | 6739..8271 | - | 1533 | WP_257188507.1 | NAD(P)-binding domain-containing protein | - |
| KFU90_RS23210 (8268) | 8268..8537 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| KFU90_RS23215 (8539) | 8539..9555 | - | 1017 | WP_000583428.1 | Gfo/Idh/MocA family oxidoreductase | - |
| KFU90_RS23220 (9558) | 9558..10385 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| KFU90_RS23225 (10369) | 10369..11607 | - | 1239 | WP_012006540.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| KFU90_RS23230 (12147) | 12147..13280 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| KFU90_RS23235 (13300) | 13300..13584 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| KFU90_RS23240 (13581) | 13581..13778 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| KFU90_RS23245 (14382) | 14382..14795 | + | 414 | WP_149517083.1 | hypothetical protein | - |
| KFU90_RS23250 (14797) | 14797..15579 | + | 783 | WP_001164200.1 | site-specific integrase | - |
| KFU90_RS23255 (15756) | 15756..16109 | + | 354 | WP_000864808.1 | colicin M immunity protein | - |
| KFU90_RS23260 (16159) | 16159..16305 | - | 147 | Protein_21 | lipid II-degrading bacteriocin | - |
| KFU90_RS23265 (16895) | 16895..17941 | + | 1047 | WP_054412954.1 | IS481 family transposase ISKpn28 | Transposase |
| KFU90_RS23270 (17998) | 17998..18234 | + | 237 | WP_054412958.1 | colicin V immunity protein | - |
| KFU90_RS23275 (18451) | 18451..18768 | + | 318 | WP_032144652.1 | colicin V family bacteriocin | - |
| KFU90_RS23280 (18955) | 18955..21051 | - | 2097 | WP_001360330.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| KFU90_RS23285 (21044) | 21044..22318 | - | 1275 | WP_257188508.1 | HlyD family secretion protein | - |
| KFU90_RS23290 (22953) | 22953..23606 | + | 654 | WP_149517117.1 | type II CAAX endopeptidase family protein | - |
| KFU90_RS23295 (23699) | 23699..23956 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| KFU90_RS23300 (23889) | 23889..24290 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| KFU90_RS23305 (24575) | 24575..25885 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| KFU90_RS23310 (25914) | 25914..26611 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| KFU90_RS23315 (26628) | 26628..26828 | + | 201 | Protein_32 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU90_RS23320 (26886) | 26886..27128 | + | 243 | WP_000844627.1 | transposase | - |
| KFU90_RS23325 (27160) | 27160..27810 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| KFU90_RS23330 (27916) | 27916..29115 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| KFU90_RS23335 (29147) | 29147..30031 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| KFU90_RS23340 (30169) | 30169..30561 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| KFU90_RS23345 (30565) | 30565..32316 | + | 1752 | Protein_38 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU90_RS23350 (32334) | 32334..33457 | + | 1124 | WP_201789284.1 | IS3 family transposase IS1133 | Transposase |
| KFU90_RS23355 (33564) | 33564..34367 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| KFU90_RS23360 (34367) | 34367..35203 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| KFU90_RS23365 (35582) | 35582..35779 | - | 198 | WP_032186310.1 | hypothetical protein | - |
| KFU90_RS23370 (36024) | 36024..36245 | + | 222 | WP_001280990.1 | hypothetical protein | - |
| KFU90_RS23375 (36261) | 36261..37286 | + | 1026 | WP_001420096.1 | hypothetical protein | - |
| KFU90_RS23380 (37701) | 37701..38051 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| KFU90_RS23385 (38054) | 38054..39016 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| KFU90_RS23390 (39163) | 39163..39456 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| KFU90_RS23395 (39533) | 39533..40216 | + | 684 | WP_000085940.1 | DNA methylase | - |
| KFU90_RS23400 (40217) | 40217..40438 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| KFU90_RS23405 (40368) | 40368..40886 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| KFU90_RS23410 (40931) | 40931..41701 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| KFU90_RS23415 (42114) | 42114..42539 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KFU90_RS23420 (42586) | 42586..43008 | + | 423 | WP_000271682.1 | DUF1380 family protein | - |
| KFU90_RS23425 (43005) | 43005..43196 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| KFU90_RS23430 (44236) | 44236..44466 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| KFU90_RS23435 (44518) | 44518..45879 | + | 1362 | WP_000170702.1 | DUF3560 domain-containing protein | - |
| KFU90_RS23440 (45927) | 45927..46490 | + | 564 | WP_001705726.1 | class I SAM-dependent methyltransferase | - |
| KFU90_RS23445 (46642) | 46642..46872 | + | 231 | WP_072179139.1 | hypothetical protein | - |
| KFU90_RS23450 (47113) | 47113..47319 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| KFU90_RS23455 (47345) | 47345..47884 | + | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| KFU90_RS23460 (47940) | 47940..48173 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| KFU90_RS23465 (48238) | 48238..50202 | + | 1965 | WP_257188505.1 | ParB/RepB/Spo0J family partition protein | - |
| KFU90_RS23470 (50271) | 50271..50705 | + | 435 | WP_000845894.1 | conjugation system SOS inhibitor PsiB | - |
| KFU90_RS23475 (50702) | 50702..51464 | + | 763 | Protein_64 | plasmid SOS inhibition protein A | - |
| KFU90_RS23480 (51433) | 51433..51621 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (51433) | 51433..51657 | + | 225 | NuclAT_0 | - | - |
| - (51433) | 51433..51657 | + | 225 | NuclAT_0 | - | - |
| - (51433) | 51433..51657 | + | 225 | NuclAT_0 | - | - |
| - (51433) | 51433..51657 | + | 225 | NuclAT_0 | - | - |
| KFU90_RS23485 (51643) | 51643..51792 | + | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| KFU90_RS23490 (51734) | 51734..51859 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KFU90_RS23495 (52079) | 52079..52309 | + | 231 | WP_071586998.1 | hypothetical protein | - |
| KFU90_RS23500 (52307) | 52307..52479 | - | 173 | Protein_69 | hypothetical protein | - |
| KFU90_RS23505 (52549) | 52549..52755 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| KFU90_RS23510 (52780) | 52780..53067 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| KFU90_RS23515 (53185) | 53185..54006 | + | 822 | WP_001234502.1 | DUF932 domain-containing protein | - |
| KFU90_RS23520 (54285) | 54285..54737 | - | 453 | WP_001469955.1 | transglycosylase SLT domain-containing protein | - |
| KFU90_RS23525 (55250) | 55250..55645 | + | 396 | WP_089581130.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KFU90_RS23530 (55806) | 55806..56570 | + | 765 | WP_089581129.1 | hypothetical protein | - |
| KFU90_RS23535 (56710) | 56710..56859 | + | 150 | WP_001401982.1 | TraY domain-containing protein | - |
| KFU90_RS23540 (57158) | 57158..57529 | + | 372 | WP_053272774.1 | type IV conjugative transfer system pilin TraA | - |
| KFU90_RS23545 (57560) | 57560..57859 | + | 300 | WP_001204091.1 | type IV conjugative transfer system protein TraL | - |
| KFU90_RS23550 (57870) | 57870..58448 | + | 579 | WP_000365869.1 | type IV conjugative transfer system protein TraE | - |
| KFU90_RS23555 (58423) | 58423..59202 | + | 780 | WP_149517071.1 | type-F conjugative transfer system secretin TraK | - |
| KFU90_RS23560 (59195) | 59195..60529 | + | 1335 | WP_021555357.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KFU90_RS23565 (60541) | 60541..61053 | + | 513 | WP_149517072.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KFU90_RS23570 (61050) | 61050..63689 | + | 2640 | WP_149517073.1 | type IV secretion system protein TraC | - |
| KFU90_RS23575 (63668) | 63668..64084 | + | 417 | WP_149517074.1 | type-F conjugative transfer system protein TrbI | - |
| KFU90_RS23580 (64087) | 64087..64311 | + | 225 | WP_000752803.1 | TraR/DksA C4-type zinc finger protein | - |
| KFU90_RS23585 (64308) | 64308..64925 | + | 618 | WP_089581124.1 | type-F conjugative transfer system protein TraW | - |
| KFU90_RS23590 (64922) | 64922..65317 | + | 396 | WP_001078242.1 | hypothetical protein | - |
| KFU90_RS23595 (65314) | 65314..66312 | + | 999 | WP_089581123.1 | conjugal transfer pilus assembly protein TraU | - |
| KFU90_RS23600 (66681) | 66681..67793 | - | 1113 | WP_252399958.1 | hypothetical protein | - |
| KFU90_RS23605 (67875) | 67875..68480 | + | 606 | WP_000265505.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KFU90_RS23610 (68477) | 68477..70411 | + | 1935 | WP_149517075.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KFU90_RS23615 (70413) | 70413..71198 | + | 786 | WP_000833559.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KFU90_RS23620 (71216) | 71216..71488 | + | 273 | WP_089572149.1 | hypothetical protein | - |
| KFU90_RS23625 (71490) | 71490..72062 | + | 573 | WP_149517076.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KFU90_RS23630 (72407) | 72407..72652 | + | 246 | WP_136755072.1 | hypothetical protein | - |
| KFU90_RS23635 (73046) | 73046..74482 | + | 1437 | WP_214281702.1 | conjugal transfer pilus assembly protein TraH | - |
| KFU90_RS23640 (74482) | 74482..77334 | + | 2853 | WP_149517078.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KFU90_RS23645 (77348) | 77348..77956 | + | 609 | Protein_98 | hypothetical protein | - |
| KFU90_RS23650 (78388) | 78388..79050 | + | 663 | WP_235412092.1 | complement resistance protein TraT | - |
| KFU90_RS23655 (79178) | 79178..79870 | + | 693 | WP_000235172.1 | hypothetical protein | - |
| KFU90_RS23660 (80012) | 80012..80380 | + | 369 | WP_235412088.1 | DUF2726 domain-containing protein | - |
| KFU90_RS23665 (80395) | 80395..80793 | - | 399 | WP_000911308.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| KFU90_RS23670 (80793) | 80793..81020 | - | 228 | WP_000450522.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| KFU90_RS23675 (81153) | 81153..83339 | + | 2187 | WP_149517080.1 | type IV conjugative transfer system coupling protein TraD | - |
| KFU90_RS23680 (83339) | 83339..88555 | + | 5217 | WP_257188506.1 | Multifunctional conjugation protein TraI | Relaxase |
| KFU90_RS23685 (88555) | 88555..88776 | + | 222 | WP_000412083.1 | hypothetical protein | - |
| KFU90_RS23690 (88784) | 88784..89533 | + | 750 | WP_000123038.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| KFU90_RS23695 (89607) | 89607..90167 | + | 561 | WP_000139377.1 | fertility inhibition protein FinO | - |
| KFU90_RS23700 (90300) | 90300..90500 | + | 201 | WP_089551172.1 | hypothetical protein | - |
| KFU90_RS23705 (90879) | 90879..91478 | + | 600 | WP_000256073.1 | PIN domain-containing protein | - |
| - (93400) | 93400..93458 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - (93400) | 93400..93458 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - (93400) | 93400..93458 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - (93400) | 93400..93458 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| KFU90_RS23715 (93505) | 93505..93654 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| KFU90_RS23720 (93922) | 93922..94176 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| KFU90_RS23725 (94283) | 94283..94468 | + | 186 | Protein_114 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|