MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 125508 bp
Accession: NZ_CP073662 Location: 1..125508 Organism: Pseudomonas sp. JS425 Replicon: plasmid pPNP1
Accession: NZ_CP073662 Location: 1..125508 Organism: Pseudomonas sp. JS425 Replicon: plasmid pPNP1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KDB76_RS28895 (KDB76_28895) | 70..1062 | + | 993 | WP_034000039.1 | hypothetical protein | - |
| KDB76_RS28900 (KDB76_28900) | 1362..1721 | + | 360 | Protein_1 | cointegrate resolution protein T | - |
| KDB76_RS28905 (KDB76_28905) | 1760..2146 | - | 387 | WP_034000041.1 | DUF2384 domain-containing protein | - |
| KDB76_RS28910 (KDB76_28910) | 2683..3155 | - | 473 | Protein_3 | methyltransferase domain-containing protein | - |
| KDB76_RS28915 (KDB76_28915) | 3705..4700 | - | 996 | WP_200929563.1 | ParB/RepB/Spo0J family partition protein | - |
| KDB76_RS28920 (KDB76_28920) | 4825..5964 | - | 1140 | WP_104833257.1 | ParA family protein | - |
| KDB76_RS28925 (KDB76_28925) | 6234..6425 | - | 192 | WP_212632293.1 | hypothetical protein | - |
| KDB76_RS28930 (KDB76_28930) | 6526..6840 | - | 315 | WP_104833256.1 | hypothetical protein | - |
| KDB76_RS28935 (KDB76_28935) | 6971..7282 | - | 312 | WP_212632294.1 | hypothetical protein | - |
| KDB76_RS28940 (KDB76_28940) | 7401..8357 | - | 957 | WP_104833254.1 | replication initiator protein A | - |
| KDB76_RS28945 (KDB76_28945) | 8705..9556 | - | 852 | WP_212632295.1 | hypothetical protein | - |
| KDB76_RS28950 (KDB76_28950) | 9939..11159 | - | 1221 | WP_212632296.1 | replication initiation protein | - |
| KDB76_RS28955 (KDB76_28955) | 11774..12926 | + | 1153 | Protein_12 | IS3 family transposase ISPa20 | Transposase |
| KDB76_RS28960 (KDB76_28960) | 13451..13834 | + | 384 | Protein_13 | hypothetical protein | - |
| KDB76_RS28965 (KDB76_28965) | 13765..16794 | - | 3030 | WP_010799689.1 | Tn3 family transposase ISPsy42 | Transposase |
| KDB76_RS28970 (KDB76_28970) | 16778..17380 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| KDB76_RS28975 (KDB76_28975) | 17572..17949 | + | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KDB76_RS28980 (KDB76_28980) | 17930..18265 | + | 336 | WP_001172026.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| KDB76_RS28985 (KDB76_28985) | 18280..18615 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| KDB76_RS28990 (KDB76_28990) | 18639..18965 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| KDB76_RS28995 (KDB76_28995) | 18962..19333 | + | 372 | WP_023294894.1 | hypothetical protein | - |
| KDB76_RS29000 (KDB76_29000) | 19472..19807 | - | 336 | WP_192576888.1 | hypothetical protein | - |
| KDB76_RS29005 (KDB76_29005) | 19808..20077 | + | 270 | WP_192576887.1 | hypothetical protein | - |
| KDB76_RS29010 (KDB76_29010) | 20074..20424 | + | 351 | WP_212632297.1 | TrfB-related DNA-binding protein | - |
| KDB76_RS29015 (KDB76_29015) | 20421..20828 | + | 408 | WP_104833234.1 | hypothetical protein | - |
| KDB76_RS29020 (KDB76_29020) | 21061..21696 | + | 636 | WP_047306864.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KDB76_RS29025 (KDB76_29025) | 22153..22707 | + | 555 | WP_047306863.1 | helix-turn-helix domain-containing protein | - |
| KDB76_RS29030 (KDB76_29030) | 22732..23394 | + | 663 | WP_047306862.1 | hypothetical protein | - |
| KDB76_RS29035 (KDB76_29035) | 23412..23702 | + | 291 | WP_225850518.1 | hypothetical protein | - |
| KDB76_RS29040 (KDB76_29040) | 23695..24240 | + | 546 | WP_182330315.1 | hypothetical protein | - |
| KDB76_RS29045 (KDB76_29045) | 24381..25652 | + | 1272 | WP_212632298.1 | DUF1173 family protein | - |
| KDB76_RS29050 (KDB76_29050) | 25654..26397 | + | 744 | WP_212632299.1 | hypothetical protein | - |
| KDB76_RS29055 (KDB76_29055) | 26414..27700 | - | 1287 | WP_047306861.1 | Y-family DNA polymerase | - |
| KDB76_RS29060 (KDB76_29060) | 27690..28121 | - | 432 | WP_047306860.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KDB76_RS29065 (KDB76_29065) | 28260..29213 | + | 954 | WP_212632300.1 | non-homologous end-joining DNA ligase | - |
| KDB76_RS29070 (KDB76_29070) | 29242..29517 | + | 276 | WP_134286862.1 | hypothetical protein | - |
| KDB76_RS29075 (KDB76_29075) | 30626..30943 | - | 318 | WP_152690486.1 | hypothetical protein | - |
| KDB76_RS29080 (KDB76_29080) | 30945..31166 | - | 222 | WP_048388335.1 | hypothetical protein | - |
| KDB76_RS29085 (KDB76_29085) | 31179..31502 | - | 324 | WP_048388333.1 | hypothetical protein | - |
| KDB76_RS29090 (KDB76_29090) | 31525..31824 | - | 300 | WP_042857721.1 | putative addiction module antidote protein | Antitoxin Detail |
| KDB76_RS29095 (KDB76_29095) | 31821..32123 | - | 303 | WP_048388330.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KDB76_RS29100 (KDB76_29100) | 32327..33106 | + | 780 | WP_182330310.1 | DUF4942 domain-containing protein | - |
| KDB76_RS29105 (KDB76_29105) | 33260..33628 | + | 369 | WP_047303037.1 | hypothetical protein | - |
| KDB76_RS29110 (KDB76_29110) | 33661..33978 | + | 318 | WP_047303035.1 | hypothetical protein | - |
| KDB76_RS29115 (KDB76_29115) | 34035..34253 | + | 219 | WP_047303033.1 | hypothetical protein | - |
| KDB76_RS29120 (KDB76_29120) | 34319..35410 | + | 1092 | WP_200902862.1 | hypothetical protein | - |
| KDB76_RS29125 (KDB76_29125) | 35557..35799 | + | 243 | WP_047303031.1 | hypothetical protein | - |
| KDB76_RS29130 (KDB76_29130) | 35851..37533 | + | 1683 | WP_047303029.1 | DNA cytosine methyltransferase | - |
| KDB76_RS29135 (KDB76_29135) | 37627..37848 | + | 222 | WP_047303027.1 | hypothetical protein | - |
| KDB76_RS29140 (KDB76_29140) | 37852..38292 | + | 441 | WP_152690399.1 | hypothetical protein | - |
| KDB76_RS29145 (KDB76_29145) | 38300..38566 | + | 267 | WP_182330308.1 | hypothetical protein | - |
| KDB76_RS29150 (KDB76_29150) | 39227..39616 | + | 390 | WP_052960126.1 | hypothetical protein | - |
| KDB76_RS29155 (KDB76_29155) | 39641..40180 | + | 540 | WP_047306911.1 | single-stranded DNA-binding protein | - |
| KDB76_RS29160 (KDB76_29160) | 40202..40384 | + | 183 | WP_047306910.1 | hypothetical protein | - |
| KDB76_RS29165 (KDB76_29165) | 40611..41438 | + | 828 | WP_047306909.1 | DUF932 domain-containing protein | - |
| KDB76_RS29170 (KDB76_29170) | 41497..41919 | + | 423 | WP_048388315.1 | hypothetical protein | - |
| KDB76_RS29175 (KDB76_29175) | 41943..42257 | + | 315 | WP_047306900.1 | TrfB-related DNA-binding protein | - |
| KDB76_RS29180 (KDB76_29180) | 42279..43298 | + | 1020 | WP_047306899.1 | hypothetical protein | - |
| KDB76_RS29185 (KDB76_29185) | 43544..46510 | - | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KDB76_RS29190 (KDB76_29190) | 46514..46906 | - | 393 | Protein_59 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| KDB76_RS29195 (KDB76_29195) | 46938..47207 | - | 270 | Protein_60 | Tn3 family transposase ISPsy42 | Transposase |
| KDB76_RS29200 (KDB76_29200) | 47225..48001 | + | 777 | WP_212632301.1 | Exoenzyme S synthesis regulatory protein ExsA | VF |
| KDB76_RS29205 (KDB76_29205) | 48066..48692 | + | 627 | WP_249206259.1 | hypothetical protein | VF |
| KDB76_RS29210 (KDB76_29210) | 48745..49122 | - | 378 | WP_238603078.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| KDB76_RS29215 (KDB76_29215) | 49555..49884 | - | 330 | Protein_64 | PLP-dependent transferase | - |
| KDB76_RS29220 (KDB76_29220) | 50005..50490 | - | 486 | WP_041167258.1 | Lrp/AsnC family transcriptional regulator | - |
| KDB76_RS29225 (KDB76_29225) | 50510..51244 | + | 735 | WP_212632302.1 | LysE family translocator | - |
| KDB76_RS29230 (KDB76_29230) | 51607..52050 | + | 444 | WP_014754500.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| KDB76_RS29235 (KDB76_29235) | 52168..52791 | - | 624 | WP_014754501.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KDB76_RS29240 (KDB76_29240) | 52903..54066 | - | 1164 | WP_212632303.1 | TniQ family protein | - |
| KDB76_RS29245 (KDB76_29245) | 54063..54971 | - | 909 | WP_212632304.1 | TniB family NTP-binding protein | - |
| KDB76_RS29250 (KDB76_29250) | 54974..56236 | - | 1263 | Protein_71 | transposase family protein | - |
| KDB76_RS30010 | 56239..56304 | + | 66 | Protein_72 | hypothetical protein | - |
| KDB76_RS29255 (KDB76_29255) | 56444..57208 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| KDB76_RS30015 | 57302..57505 | - | 204 | Protein_74 | hypothetical protein | - |
| KDB76_RS29260 (KDB76_29260) | 57504..58529 | + | 1026 | WP_080708177.1 | MBL fold metallo-hydrolase | - |
| KDB76_RS29265 (KDB76_29265) | 58558..59832 | - | 1275 | WP_032491441.1 | RNA polymerase sigma factor | - |
| KDB76_RS29270 (KDB76_29270) | 59905..60669 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| KDB76_RS29275 (KDB76_29275) | 61056..61556 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| KDB76_RS29280 (KDB76_29280) | 61684..62535 | - | 852 | WP_000946487.1 | Dihydropteroate synthase | ARG |
| KDB76_RS29285 (KDB76_29285) | 62637..63650 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| KDB76_RS29290 (KDB76_29290) | 63854..64273 | - | 420 | Protein_81 | helix-turn-helix domain-containing protein | - |
| KDB76_RS29295 (KDB76_29295) | 64408..64587 | - | 180 | Protein_82 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| KDB76_RS29300 (KDB76_29300) | 64590..65198 | - | 609 | WP_014003956.1 | hypothetical protein | - |
| KDB76_RS29305 (KDB76_29305) | 65742..66530 | - | 789 | WP_235208009.1 | phosphocholine cytidylyltransferase family protein | - |
| KDB76_RS29310 (KDB76_29310) | 66764..67873 | + | 1110 | WP_225776318.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| KDB76_RS29315 (KDB76_29315) | 67995..68762 | + | 768 | WP_038409912.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| KDB76_RS29320 (KDB76_29320) | 68788..71130 | - | 2343 | WP_080708176.1 | ELM1/GtrOC1 family putative glycosyltransferase | - |
| KDB76_RS29325 (KDB76_29325) | 71276..72121 | + | 846 | WP_038409911.1 | metallophosphoesterase | - |
| KDB76_RS29330 (KDB76_29330) | 72184..72717 | + | 534 | WP_038410461.1 | ATP-dependent zinc protease | - |
| KDB76_RS29335 (KDB76_29335) | 72781..73734 | - | 954 | WP_038409910.1 | hypothetical protein | - |
| KDB76_RS29340 (KDB76_29340) | 73749..74717 | - | 969 | WP_038409909.1 | acylglycerol kinase family protein | - |
| KDB76_RS29345 (KDB76_29345) | 74734..75813 | - | 1080 | WP_038409908.1 | LPS export ABC transporter permease LptG | - |
| KDB76_RS29350 (KDB76_29350) | 75810..76883 | - | 1074 | WP_038409906.1 | LPS export ABC transporter permease LptF | - |
| KDB76_RS29355 (KDB76_29355) | 76990..77802 | - | 813 | WP_038409905.1 | nucleotidyltransferase family protein | - |
| KDB76_RS29360 (KDB76_29360) | 77786..78001 | - | 216 | Protein_95 | N-acetyltransferase | - |
| KDB76_RS29365 (KDB76_29365) | 78071..78924 | + | 854 | WP_086005488.1 | IS5 family transposase ISPst8 | Transposase |
| KDB76_RS29370 (KDB76_29370) | 78910..79851 | - | 942 | Protein_97 | N-acetyltransferase | - |
| KDB76_RS29375 (KDB76_29375) | 80122..81873 | + | 1752 | WP_102886377.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| KDB76_RS29380 (KDB76_29380) | 81873..82784 | + | 912 | WP_062378655.1 | NAD-dependent epimerase/dehydratase family protein | - |
| KDB76_RS29385 (KDB76_29385) | 82819..83079 | + | 261 | WP_062378968.1 | phosphopantetheine-binding protein | - |
| KDB76_RS29390 (KDB76_29390) | 83066..84259 | + | 1194 | WP_062378653.1 | 8-amino-7-oxononanoate synthase | VF |
| KDB76_RS29395 (KDB76_29395) | 84367..86097 | + | 1731 | WP_062378651.1 | Heterocyst differentiation ATP-binding protein HepA | VF |
| KDB76_RS29400 (KDB76_29400) | 86983..87258 | - | 276 | WP_062378649.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KDB76_RS29405 (KDB76_29405) | 87258..87530 | - | 273 | WP_062378647.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KDB76_RS29410 (KDB76_29410) | 87709..88671 | + | 963 | WP_102886376.1 | IS91 family transposase ISWz1 | Transposase |
| KDB76_RS29415 (KDB76_29415) | 89130..89983 | + | 854 | WP_086005488.1 | IS5 family transposase ISPst8 | Transposase |
| KDB76_RS29420 (KDB76_29420) | 89987..91042 | - | 1056 | Protein_107 | DUF4113 domain-containing protein | - |
| KDB76_RS29425 (KDB76_29425) | 91076..91338 | - | 263 | Protein_108 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KDB76_RS30115 (KDB76_29430) | 91359..92663 | - | 1305 | WP_038409901.1 | Biofilm dispersion protein BdlA | VF |
| KDB76_RS30120 | 92916..93041 | - | 126 | WP_024100024.1 | hypothetical protein | - |
| KDB76_RS29440 (KDB76_29440) | 93277..96294 | + | 3018 | WP_038409900.1 | Tn3 family transposase TnpA_ISPa42 | Transposase |
| KDB76_RS29445 (KDB76_29445) | 96291..96680 | + | 390 | WP_038409899.1 | Tn3 family transposase post-transcriptional regulator TnpC | - |
| KDB76_RS29450 (KDB76_29450) | 96763..97839 | + | 1077 | WP_038409898.1 | ArsO family NAD(P)H-dependent flavin-containing monooxygenase | - |
| KDB76_RS29455 (KDB76_29455) | 97864..98688 | - | 825 | Protein_114 | MFS transporter | - |
| KDB76_RS29460 (KDB76_29460) | 98728..99099 | - | 372 | WP_023294894.1 | hypothetical protein | - |
| KDB76_RS29465 (KDB76_29465) | 99096..99422 | - | 327 | WP_000091614.1 | hypothetical protein | - |
| KDB76_RS29470 (KDB76_29470) | 99446..99781 | - | 336 | WP_000741275.1 | hypothetical protein | - |
| KDB76_RS30030 | 99796..100086 | - | 291 | WP_249206257.1 | helix-turn-helix transcriptional regulator | - |
| KDB76_RS29480 (KDB76_29480) | 99979..102489 | + | 2511 | Protein_119 | Tn3 family transposase ISPsy42 | Transposase |
| KDB76_RS30035 | 102420..102743 | - | 324 | WP_080708174.1 | hypothetical protein | - |
| KDB76_RS29485 (KDB76_29485) | 102779..103024 | - | 246 | WP_038409896.1 | hypothetical protein | - |
| KDB76_RS29490 (KDB76_29490) | 103104..103625 | - | 522 | WP_049870827.1 | cupin domain-containing protein | - |
| KDB76_RS29495 (KDB76_29495) | 104156..104416 | + | 261 | WP_049870826.1 | hypothetical protein | - |
| KDB76_RS29500 (KDB76_29500) | 104583..105077 | + | 495 | WP_038409893.1 | hypothetical protein | - |
| KDB76_RS29505 (KDB76_29505) | 105129..106148 | + | 1020 | WP_038409892.1 | hydroxyquinol 1,2-dioxygenase | - |
| KDB76_RS29510 (KDB76_29510) | 106242..107705 | + | 1464 | WP_038409891.1 | aldehyde dehydrogenase family protein | - |
| KDB76_RS29515 (KDB76_29515) | 107714..108781 | + | 1068 | WP_038409889.1 | Maleylacetate reductase | VF |
| KDB76_RS29520 (KDB76_29520) | 108850..109722 | + | 873 | WP_038409888.1 | dioxygenase | - |
| KDB76_RS29525 (KDB76_29525) | 109726..110043 | + | 318 | WP_038409886.1 | YciI family protein | - |
| KDB76_RS29530 (KDB76_29530) | 110040..110381 | + | 342 | WP_038409885.1 | Rieske 2Fe-2S domain-containing protein | - |
| KDB76_RS29535 (KDB76_29535) | 110525..110965 | + | 441 | WP_038409884.1 | CBS domain-containing protein | - |
| KDB76_RS29540 (KDB76_29540) | 111078..112379 | - | 1302 | WP_011920678.1 | ISL3 family transposase ISPsp2 | Transposase |
| KDB76_RS29545 (KDB76_29545) | 112461..113309 | - | 849 | WP_235208011.1 | methyl-accepting chemotaxis protein | - |
| KDB76_RS29550 (KDB76_29550) | 113364..113795 | + | 432 | WP_003460108.1 | IS200-IS605 family transposase ISPlu2 | Transposase |
| KDB76_RS29555 (KDB76_29555) | 113910..114125 | - | 216 | Protein_135 | PAS domain S-box protein | - |
| KDB76_RS29560 (KDB76_29560) | 114385..114945 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| KDB76_RS29565 (KDB76_29565) | 114948..117914 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| KDB76_RS29570 (KDB76_29570) | 117964..118161 | + | 198 | WP_176491792.1 | hypothetical protein | - |
| KDB76_RS29575 (KDB76_29575) | 118269..118580 | + | 312 | WP_034000034.1 | hypothetical protein | - |
| KDB76_RS30040 | 118590..118730 | - | 141 | WP_228778722.1 | hypothetical protein | - |
| KDB76_RS29585 (KDB76_29585) | 119080..120051 | - | 972 | WP_034000036.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| KDB76_RS29590 (KDB76_29590) | 120232..120495 | + | 264 | Protein_142 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| KDB76_RS29595 (KDB76_29595) | 120699..122213 | + | 1515 | WP_038408847.1 | IS21 family transposase ISPpu7 | Transposase |
| KDB76_RS29600 (KDB76_29600) | 122231..122986 | + | 756 | WP_038408850.1 | IS21 family transposase ISPpu23 | Transposase |
| KDB76_RS29605 (KDB76_29605) | 123093..123836 | + | 744 | Protein_145 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| KDB76_RS29610 (KDB76_29610) | 124092..125042 | + | 951 | WP_052150483.1 | Abi family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|