MGE detailed information
MGE type: Mobilizable plasmid MGE length: 91224 bp
Accession: NZ_CP072806 Location: 1..91224 Organism: Escherichia coli strain PK5074 Replicon: plasmid pPK5074-91kb
Accession: NZ_CP072806 Location: 1..91224 Organism: Escherichia coli strain PK5074 Replicon: plasmid pPK5074-91kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8617_RS24920 (J8617_24905) | 104..940 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| J8617_RS24925 (J8617_24910) | 940..1743 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| J8617_RS24930 (J8617_24915) | 1804..2619 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| J8617_RS26420 | 2949..3035 | + | 87 | Protein_3 | Arm DNA-binding domain-containing protein | - |
| J8617_RS24940 (J8617_24925) | 3307..4062 | - | 756 | Protein_4 | IS110 family transposase IS5075 | Transposase |
| J8617_RS24945 (J8617_24930) | 4115..4819 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS24950 (J8617_24935) | 4887..6185 | + | 1299 | Protein_6 | Tn3 family transposase TnpA_Tn3 | Transposase |
| J8617_RS24955 (J8617_24940) | 6219..6935 | + | 717 | Protein_7 | Tn3 family transposase | - |
| J8617_RS24960 (J8617_24945) | 6954..7296 | - | 343 | Protein_8 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| J8617_RS24970 (J8617_24955) | 7645..7956 | - | 312 | WP_016246567.1 | hypothetical protein | - |
| J8617_RS24975 (J8617_24960) | 8007..9038 | - | 1032 | WP_000067534.1 | site-specific integrase | - |
| J8617_RS24980 (J8617_24965) | 9046..9267 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| J8617_RS24985 (J8617_24970) | 9872..10081 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| J8617_RS24990 (J8617_24975) | 10192..11043 | + | 852 | WP_000611661.1 | phage repressor protein C1 | - |
| J8617_RS24995 (J8617_24980) | 11076..11450 | - | 375 | WP_000028983.1 | phage antirepressor KilAC domain-containing protein | - |
| J8617_RS25000 (J8617_24985) | 11690..12733 | - | 1044 | WP_000648838.1 | DUF968 domain-containing protein | - |
| J8617_RS25005 (J8617_24990) | 12761..12940 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| J8617_RS25010 (J8617_24995) | 12945..13325 | - | 381 | WP_001216039.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J8617_RS25015 (J8617_25000) | 13325..13546 | - | 222 | WP_001190711.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J8617_RS25020 (J8617_25005) | 13811..14508 | + | 698 | WP_223400810.1 | IS1-like element IS1X2 family transposase | - |
| J8617_RS25025 (J8617_25010) | 14525..14851 | - | 327 | Protein_20 | hypothetical protein | - |
| J8617_RS25030 (J8617_25015) | 14924..16186 | - | 1263 | WP_210388690.1 | hypothetical protein | - |
| J8617_RS25035 (J8617_25020) | 16488..17189 | - | 702 | WP_000684873.1 | hypothetical protein | - |
| J8617_RS25040 (J8617_25025) | 17186..17350 | - | 165 | Protein_23 | serine/threonine protein phosphatase | - |
| J8617_RS25050 (J8617_25035) | 18174..18908 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| J8617_RS25055 (J8617_25040) | 19027..19725 | + | 699 | Protein_26 | IS3 family transposase IS2 | Transposase |
| J8617_RS25060 (J8617_25045) | 19916..23389 | - | 3474 | WP_127762869.1 | cellulose synthase complex outer membrane protein BcsC | - |
| J8617_RS26425 | 23371..23523 | - | 153 | Protein_28 | endo-1,4-D-glucanase | - |
| J8617_RS25065 (J8617_25050) | 23856..24242 | - | 387 | Protein_29 | IS200-IS605 family transposase IS200C | Transposase |
| J8617_RS25070 (J8617_25055) | 24428..25774 | - | 1347 | WP_077392781.1 | group II intron reverse transcriptase/maturase | - |
| J8617_RS25075 (J8617_25060) | 26518..28668 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| J8617_RS25080 (J8617_25065) | 28732..30837 | - | 2106 | WP_001352000.1 | UDP-forming cellulose synthase catalytic subunit | - |
| J8617_RS25085 (J8617_25070) | 30918..31615 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| J8617_RS25090 (J8617_25075) | 31626..32306 | - | 681 | WP_232379236.1 | GGDEF domain-containing protein | - |
| J8617_RS25100 (J8617_25085) | 33501..34084 | + | 584 | Protein_36 | IS1 family transposase | - |
| J8617_RS25105 (J8617_25090) | 34148..34852 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J8617_RS25110 (J8617_25095) | 35195..35719 | - | 525 | WP_232379235.1 | Ig-like domain-containing protein | - |
| J8617_RS25115 (J8617_25100) | 35725..36429 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS25120 (J8617_25105) | 36506..37579 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| J8617_RS25125 (J8617_25110) | 37623..37772 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| J8617_RS26430 | 37979..38089 | - | 111 | Protein_42 | protein YdfV | - |
| J8617_RS25130 (J8617_25115) | 38114..38353 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J8617_RS25135 (J8617_25120) | 38353..38640 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J8617_RS25140 (J8617_25125) | 38923..39147 | + | 225 | Protein_45 | hypothetical protein | - |
| J8617_RS25145 (J8617_25130) | 39584..39793 | + | 210 | WP_072662162.1 | hypothetical protein | - |
| J8617_RS25150 (J8617_25135) | 39799..40288 | - | 490 | Protein_47 | IS3 family transposase | - |
| J8617_RS25155 (J8617_25140) | 40369..41877 | - | 1509 | WP_141223309.1 | group II intron reverse transcriptase/maturase | - |
| J8617_RS25160 (J8617_25145) | 42550..42975 | - | 426 | Protein_49 | IS3 family transposase | - |
| J8617_RS26435 | 42963..43043 | + | 81 | Protein_50 | hypothetical protein | - |
| J8617_RS25165 (J8617_25150) | 43040..44191 | + | 1152 | WP_072664366.1 | IS30 family transposase IS30D | Transposase |
| J8617_RS25170 (J8617_25155) | 44204..44461 | - | 258 | Protein_52 | IS3 family transposase ISEc52 | Transposase |
| J8617_RS25175 (J8617_25160) | 44530..45330 | + | 801 | Protein_53 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| J8617_RS25180 (J8617_25165) | 45365..45688 | - | 324 | Protein_54 | IS110 family transposase ISSm1 | Transposase |
| J8617_RS25185 (J8617_25170) | 46537..47547 | - | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| J8617_RS25190 (J8617_25175) | 48288..49454 | + | 1167 | WP_063501643.1 | Sporulation initiation inhibitor protein Soj | VF |
| J8617_RS25195 (J8617_25180) | 49454..50425 | + | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| J8617_RS25200 (J8617_25185) | 51932..52237 | - | 306 | WP_000534920.1 | hypothetical protein | - |
| J8617_RS25205 (J8617_25190) | 52291..52542 | - | 252 | WP_000181753.1 | hypothetical protein | - |
| J8617_RS25210 (J8617_25195) | 52628..53790 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| J8617_RS25215 (J8617_25200) | 53867..55498 | - | 1632 | WP_223648180.1 | hypothetical protein | Relaxase |
| J8617_RS25220 (J8617_25205) | 55509..56231 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| J8617_RS25225 (J8617_25210) | 56228..56713 | - | 486 | WP_000071636.1 | conjugative transfer protein MobI(A/C) | - |
| J8617_RS25230 (J8617_25215) | 57739..58269 | + | 531 | WP_072664199.1 | hypothetical protein | - |
| J8617_RS25235 (J8617_25220) | 58272..58610 | + | 339 | WP_232379232.1 | hypothetical protein | - |
| J8617_RS25240 (J8617_25225) | 58953..59120 | - | 168 | Protein_66 | IS3 family transposase | - |
| J8617_RS26440 | 59119..59199 | + | 81 | Protein_67 | hypothetical protein | - |
| J8617_RS25245 (J8617_25230) | 59784..63299 | + | 3516 | WP_165463807.1 | Outer membrane protein IcsA autotransporter | VF |
| J8617_RS25250 (J8617_25235) | 63531..64227 | + | 697 | WP_232379233.1 | IS1 family transposase IS1R | Transposase |
| J8617_RS25255 (J8617_25240) | 64609..64896 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J8617_RS25260 (J8617_25245) | 64893..65144 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J8617_RS25265 (J8617_25250) | 65757..67573 | + | 1817 | Protein_72 | helicase | - |
| J8617_RS25270 (J8617_25255) | 67607..68047 | + | 441 | WP_038997035.1 | hypothetical protein | - |
| J8617_RS25275 (J8617_25260) | 68044..68292 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| J8617_RS25280 (J8617_25265) | 68560..69186 | - | 627 | Protein_75 | IS5 family transposase ISKpn26 | Transposase |
| J8617_RS25285 (J8617_25270) | 69220..70734 | - | 1515 | Protein_76 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| J8617_RS25290 (J8617_25275) | 70800..71504 | + | 705 | WP_210388687.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS25295 (J8617_25280) | 71450..72109 | - | 660 | Protein_78 | SprT-like domain-containing protein | - |
| J8617_RS25300 (J8617_25285) | 72393..73049 | - | 657 | WP_012537714.1 | Pentapeptide repeat protein | ARG |
| J8617_RS25305 (J8617_25290) | 73412..73849 | + | 438 | WP_226157009.1 | helix-turn-helix transcriptional regulator | - |
| J8617_RS25310 (J8617_25295) | 73914..74351 | - | 438 | Protein_81 | recombinase family protein | - |
| J8617_RS25315 (J8617_25300) | 74416..75120 | + | 705 | WP_210388689.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS25320 (J8617_25305) | 75205..76545 | + | 1341 | WP_000524891.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| J8617_RS25325 (J8617_25310) | 76734..77105 | - | 372 | Protein_84 | IS5 family transposase ISKpn26 | Transposase |
| J8617_RS25330 (J8617_25315) | 77151..77897 | - | 747 | WP_072716737.1 | hypothetical protein | - |
| J8617_RS25335 (J8617_25320) | 77976..78308 | - | 333 | Protein_86 | Ref family protein | - |
| J8617_RS25340 (J8617_25325) | 78581..79357 | + | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| J8617_RS25345 (J8617_25330) | 79373..80362 | + | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| J8617_RS25350 (J8617_25335) | 80443..80796 | + | 354 | WP_232379234.1 | ester cyclase | - |
| J8617_RS25355 (J8617_25340) | 80921..81625 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS25360 (J8617_25345) | 81602..81940 | + | 339 | WP_164708664.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| J8617_RS25365 (J8617_25350) | 82073..82777 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J8617_RS25370 (J8617_25355) | 83189..83926 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| J8617_RS25375 (J8617_25360) | 83923..84147 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| J8617_RS25380 (J8617_25365) | 84358..85851 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| J8617_RS26445 | 85882..86766 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| J8617_RS25390 (J8617_25375) | 86983..88197 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| J8617_RS25395 (J8617_25380) | 88225..88530 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| J8617_RS25400 (J8617_25385) | 88642..88830 | + | 189 | Protein_99 | IS91 family transposase | - |
| J8617_RS25405 (J8617_25390) | 88797..89996 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| J8617_RS25410 (J8617_25395) | 90102..90752 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| J8617_RS25415 (J8617_25400) | 90784..91026 | - | 243 | WP_000844627.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|