NZ_CP0720541300529..1322203

MGE detailed information

MGE type: Prophage        MGE length: 21675 bp
Accession: NZ_CP072054        Location: 1300529..1322203         Organism: Escherichia coli strain K1508       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
J5N95_RS21795 (1296518) 1296518..1296565 + 48 WP_211180494.1 protein YnaN -
J5N95_RS06325 (1296579) 1296579..1297562 + 984 WP_000387388.1 zinc transporter ZntB -
J5N95_RS22025 (1297837) 1297837..1298010 + 174 WP_001296046.1 protein YnaL -
J5N95_RS06330 (1298040) 1298040..1299413 + 1374 WP_000123737.1 ATP-dependent RNA helicase DbpA -
J5N95_RS06335 (1299542) 1299542..1300477 - 936 WP_001157406.1 tRNA 2-thiocytidine(32) synthetase TtcA -
J5N95_RS06340 (1300529) 1300529..1301764 - 1236 WP_000040852.1 Putative defective protein IntQ ; Integrase Integrase
J5N95_RS06345 (1301766) 1301766..1301981 - 216 WP_000079604.1 excisionase XisR -
- (1302085) 1302085..1302263 + 179 NuclAT_0 - Antitoxin Detail
- (1302085) 1302085..1302263 + 179 NuclAT_0 - Antitoxin Detail
- (1302085) 1302085..1302263 + 179 NuclAT_0 - Antitoxin Detail
- (1302085) 1302085..1302263 + 179 NuclAT_0 - Antitoxin Detail
J5N95_RS06350 (1302060) 1302060..1302269 - 210 WP_000276809.1 double-strand break reduction protein RcbA -
J5N95_RS06355 (1302262) 1302262..1302456 - 195 WP_001317028.1 type I toxin-antitoxin system endodeoxyribonuclease toxin RalR Toxin Detail
J5N95_RS06360 (1302513) 1302513..1303322 - 810 WP_000166319.1 recombination protein RecT -
J5N95_RS06365 (1303315) 1303315..1305915 - 2601 WP_000105143.1 exodeoxyribonuclease VIII -
J5N95_RS06370 (1306017) 1306017..1306292 - 276 WP_000632297.1 protein RacC -
J5N95_RS06375 (1306367) 1306367..1306537 - 171 WP_001352098.1 YdaE family protein -
J5N95_RS06380 (1306537) 1306537..1306758 - 222 WP_000560225.1 killing protein KilR -
J5N95_RS06385 (1307200) 1307200..1307688 + 489 WP_001312793.1 superinfection exclusion B family protein -
J5N95_RS06390 (1307685) 1307685..1307840 - 156 WP_001169151.1 YdaF family protein -
J5N95_RS22030 (1307851) 1307851..1307985 - 135 WP_000233809.1 phage protein -
J5N95_RS06395 (1308294) 1308294..1308770 - 477 WP_000948459.1 DNA-binding transcriptional repressor RacR -
J5N95_RS06400 (1308894) 1308894..1309190 + 297 WP_000712069.1 toxin YdaS -
J5N95_RS06405 (1309213) 1309213..1309635 + 423 WP_000693797.1 toxin YdaT family protein -
J5N95_RS06410 (1309648) 1309648..1310505 + 858 WP_000899748.1 YdaU family protein -
J5N95_RS06415 (1310512) 1310512..1311258 + 747 WP_000788970.1 ATP-binding protein -
J5N95_RS06420 (1311281) 1311281..1311733 + 453 Protein_1260 DUF1627 domain-containing protein -
J5N95_RS06425 (1311929) 1311929..1312114 + 186 WP_001228696.1 prophage lysis lipoprotein RzoD -
J5N95_RS06430 (1312311) 1312311..1313768 + 1458 WP_001097895.1 Trk system potassium transporter TrkG -
J5N95_RS06435 (1313906) 1313906..1314169 + 264 WP_001350510.1 ParB/Srx family N-terminal domain-containing protein -
J5N95_RS06440 (1314150) 1314150..1314509 + 360 WP_000091628.1 protein YdaY -
J5N95_RS06445 (1314983) 1314983..1315915 + 933 Protein_1265 phage tail length tape measure family protein -
J5N95_RS06450 (1315918) 1315918..1316133 + 216 Protein_1266 Ail/Lom family outer membrane beta-barrel protein -
J5N95_RS06455 (1316275) 1316275..1317255 - 981 WP_000019448.1 IS5 family transposase ISKpn26 Transposase
J5N95_RS06460 (1317325) 1317325..1317513 + 189 Protein_1268 Ail/Lom family outer membrane beta-barrel protein -
J5N95_RS06465 (1317578) 1317578..1320940 + 3363 WP_000279097.1 prophage tail fiber N-terminal domain-containing protein -
J5N95_RS06470 (1320940) 1320940..1321515 + 576 WP_001698950.1 tail fiber assembly protein -
J5N95_RS06475 (1321613) 1321613..1322203 - 591 WP_000086527.1 Tn3 family transposase TnpR_ISSba14 Transposase
J5N95_RS06480 (1322520) 1322520..1322753 - 234 WP_000836770.1 cold shock protein YdfK -
J5N95_RS06485 (1322822) 1322822..1322935 - 114 WP_120795384.1 YnaM/YnfT family protein -
J5N95_RS06490 (1323714) 1323714..1324148 - 435 WP_001300461.1 universal stress protein UspF -
J5N95_RS06495 (1324289) 1324289..1325422 - 1134 WP_000837921.1 porin OmpN -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20020 CP009789 1385172..1414104 0.008
Escherichia coli str. K-12 substr. MC4100 Prophage TA20061 HG738867 1300529..1322203 0
Escherichia coli str. K-12 substr. MG1655 Prophage TA6362 NC_000913 1412000..1433674 0
Escherichia coli str. K-12 substr. W3110 Prophage TA21432 NC_007779 1413714..1435388 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22680 NC_010473 1499420..1521094 0
Escherichia coli BW2952 Prophage TA23848 NC_012759 1302083..1323757 0
Escherichia coli DH1 Prophage TA27398 NC_017638 1394182..1415856 0
Escherichia coli BW25113 Prophage TA48677 NZ_CP009273 1406257..1427931 0
Escherichia coli strain DH5alpha Prophage TA90473 NZ_CP025520 269442..291116 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285012 NZ_HG738867 1300529..1322203 0